Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.32□□□□□ -1.72
TRIM13O60858 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4.32□□□□□ -1.72
TRIM13O60858 EZH2P1-201ENST00000431167 291 ntBASIC4.32□□□□□ -1.72
TRIM13O60858 RNU7-167P-201ENST00000459160 62 ntBASIC4.32□□□□□ -1.72
TRIM13O60858 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
TRIM13O60858 AC117503.1-201ENST00000472241 394 ntBASIC4.32□□□□□ -1.72
TRIM13O60858 TRBVB-201ENST00000477100 408 ntBASIC4.32□□□□□ -1.72
TRIM13O60858 AL139099.1-201ENST00000497398 403 ntBASIC4.32□□□□□ -1.72
TRIM13O60858 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.32□□□□□ -1.72
TRIM13O60858 SNORD116-26-201ENST00000516006 96 ntBASIC4.32□□□□□ -1.72
TRIM13O60858 SNORA40.15-201ENST00000516884 107 ntBASIC4.32□□□□□ -1.72
TRIM13O60858 RNU6-570P-201ENST00000517051 105 ntBASIC4.32□□□□□ -1.72
TRIM13O60858 FAM60DP-201ENST00000524174 632 ntBASIC4.32□□□□□ -1.72
TRIM13O60858 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC4.32□□□□□ -1.72
TRIM13O60858 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.32□□□□□ -1.72
TRIM13O60858 SARNP-203ENST00000552080 726 ntTSL 2 BASIC4.32□□□□□ -1.72
TRIM13O60858 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.32□□□□□ -1.72
TRIM13O60858 AC106782.4-201ENST00000568264 210 ntBASIC4.32□□□□□ -1.72
TRIM13O60858 AC090517.1-201ENST00000569307 266 ntBASIC4.32□□□□□ -1.72
TRIM13O60858 AC012443.1-201ENST00000605605 231 ntBASIC4.32□□□□□ -1.72
TRIM13O60858 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC4.32□□□□□ -1.72
TRIM13O60858 MIR6826-201ENST00000617808 98 ntBASIC4.32□□□□□ -1.72
TRIM13O60858 MIR6891-201ENST00000618788 93 ntBASIC4.32□□□□□ -1.72
TRIM13O60858 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.32□□□□□ -1.72
TRIM13O60858 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
TRIM13O60858 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.32□□□□□ -1.72
TRIM13O60858 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.32□□□□□ -1.72
TRIM13O60858 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
TRIM13O60858 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TRIM13O60858 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.31□□□□□ -1.72
TRIM13O60858 ZNF33CP-201ENST00000432492 2030 ntBASIC4.31□□□□□ -1.72
TRIM13O60858 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
TRIM13O60858 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
TRIM13O60858 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TRIM13O60858 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.31□□□□□ -1.72
TRIM13O60858 RNU6-545P-201ENST00000362681 104 ntBASIC4.31□□□□□ -1.72
TRIM13O60858 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
TRIM13O60858 SNORD66.1-201ENST00000391230 76 ntBASIC4.31□□□□□ -1.72
TRIM13O60858 AC108032.1-201ENST00000416706 207 ntBASIC4.31□□□□□ -1.72
TRIM13O60858 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC4.31□□□□□ -1.72
TRIM13O60858 MTCO3P29-201ENST00000432119 779 ntBASIC4.31□□□□□ -1.72
TRIM13O60858 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.31□□□□□ -1.72
TRIM13O60858 RPS3AP12-201ENST00000443616 753 ntBASIC4.31□□□□□ -1.72
TRIM13O60858 MTCO3P8-201ENST00000453691 755 ntBASIC4.31□□□□□ -1.72
TRIM13O60858 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.31□□□□□ -1.72
TRIM13O60858 COX7A2P2-201ENST00000505291 250 ntBASIC4.31□□□□□ -1.72
TRIM13O60858 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.31□□□□□ -1.72
TRIM13O60858 AC108078.2-201ENST00000510750 236 ntBASIC4.31□□□□□ -1.72
TRIM13O60858 RNU6-685P-201ENST00000517088 95 ntBASIC4.31□□□□□ -1.72
TRIM13O60858 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.31□□□□□ -1.72
TRIM13O60858 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.31□□□□□ -1.72
TRIM13O60858 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.31□□□□□ -1.72
TRIM13O60858 AL121576.1-201ENST00000556055 276 ntBASIC4.31□□□□□ -1.72
TRIM13O60858 OR1F2P-201ENST00000570470 933 ntBASIC4.31□□□□□ -1.72
TRIM13O60858 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC4.31□□□□□ -1.72
TRIM13O60858 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
TRIM13O60858 AC009570.1-201ENST00000609599 745 ntBASIC4.31□□□□□ -1.72
TRIM13O60858 AL136313.1-201ENST00000624804 202 ntBASIC4.31□□□□□ -1.72
TRIM13O60858 MIR4496-201ENST00000635896 61 ntBASIC4.31□□□□□ -1.72
TRIM13O60858 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TRIM13O60858 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
TRIM13O60858 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
TRIM13O60858 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.31□□□□□ -1.72
TRIM13O60858 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
TRIM13O60858 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
TRIM13O60858 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.31□□□□□ -1.72
TRIM13O60858 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
TRIM13O60858 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
TRIM13O60858 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
TRIM13O60858 ZNF72P-201ENST00000425869 1908 ntBASIC4.31□□□□□ -1.72
TRIM13O60858 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.3□□□□□ -1.72
TRIM13O60858 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.3□□□□□ -1.72
TRIM13O60858 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
TRIM13O60858 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
TRIM13O60858 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TRIM13O60858 RNA5SP388-201ENST00000362584 119 ntBASIC4.3□□□□□ -1.72
TRIM13O60858 RNU6-212P-201ENST00000362642 104 ntBASIC4.3□□□□□ -1.72
TRIM13O60858 RNU6-960P-201ENST00000364056 120 ntBASIC4.3□□□□□ -1.72
TRIM13O60858 SNORD74.4-201ENST00000364129 80 ntBASIC4.3□□□□□ -1.72
TRIM13O60858 SNORA23-201ENST00000365128 182 ntBASIC4.3□□□□□ -1.72
TRIM13O60858 Y_RNA.506-201ENST00000384494 102 ntBASIC4.3□□□□□ -1.72
TRIM13O60858 MIR659-201ENST00000384963 97 ntBASIC4.3□□□□□ -1.72
TRIM13O60858 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.3□□□□□ -1.72
TRIM13O60858 SNORD70.1-201ENST00000391007 85 ntBASIC4.3□□□□□ -1.72
TRIM13O60858 GLULP6-201ENST00000399502 913 ntBASIC4.3□□□□□ -1.72
TRIM13O60858 RNU4-34P-201ENST00000410431 124 ntBASIC4.3□□□□□ -1.72
TRIM13O60858 RNU6-293P-201ENST00000411259 106 ntBASIC4.3□□□□□ -1.72
TRIM13O60858 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.3□□□□□ -1.72
TRIM13O60858 RPL21P109-201ENST00000422213 475 ntBASIC4.3□□□□□ -1.72
TRIM13O60858 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC4.3□□□□□ -1.72
TRIM13O60858 FAR2P4-202ENST00000425399 584 ntBASIC4.3□□□□□ -1.72
TRIM13O60858 RPL7P2-201ENST00000427639 268 ntBASIC4.3□□□□□ -1.72
TRIM13O60858 CALM2P2-201ENST00000428512 440 ntBASIC4.3□□□□□ -1.72
TRIM13O60858 ELOCP18-201ENST00000434209 337 ntBASIC4.3□□□□□ -1.72
TRIM13O60858 AC004383.1-201ENST00000438135 289 ntBASIC4.3□□□□□ -1.72
TRIM13O60858 AL353748.1-201ENST00000440753 474 ntBASIC4.3□□□□□ -1.72
TRIM13O60858 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.3□□□□□ -1.72
TRIM13O60858 NEFMP1-201ENST00000443423 1006 ntBASIC4.3□□□□□ -1.72
TRIM13O60858 NDUFB1P2-201ENST00000449477 176 ntBASIC4.3□□□□□ -1.72
TRIM13O60858 PPIAP20-201ENST00000449839 135 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms