Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC1.93□□□□□ -2.1
SGCEO43556 PSPHP1-201ENST00000450062 261 ntBASIC1.93□□□□□ -2.1
SGCEO43556 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC1.93□□□□□ -2.1
SGCEO43556 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.93□□□□□ -2.1
SGCEO43556 AC004263.1-201ENST00000479327 332 ntBASIC1.93□□□□□ -2.1
SGCEO43556 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
SGCEO43556 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC1.93□□□□□ -2.1
SGCEO43556 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC1.93□□□□□ -2.1
SGCEO43556 SNORA31.6-201ENST00000516241 130 ntBASIC1.93□□□□□ -2.1
SGCEO43556 RNU7-193P-201ENST00000516723 65 ntBASIC1.93□□□□□ -2.1
SGCEO43556 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
SGCEO43556 SLC2A13P1-201ENST00000531560 322 ntBASIC1.93□□□□□ -2.1
SGCEO43556 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC1.93□□□□□ -2.1
SGCEO43556 AL133241.1-201ENST00000556832 487 ntBASIC1.93□□□□□ -2.1
SGCEO43556 ANP32BP3-201ENST00000559213 706 ntBASIC1.93□□□□□ -2.1
SGCEO43556 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC1.93□□□□□ -2.1
SGCEO43556 AL445264.1-201ENST00000621719 171 ntBASIC1.93□□□□□ -2.1
SGCEO43556 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
SGCEO43556 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
SGCEO43556 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.93□□□□□ -2.1
SGCEO43556 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.93□□□□□ -2.1
SGCEO43556 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
SGCEO43556 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC1.93□□□□□ -2.1
SGCEO43556 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
SGCEO43556 AC006020.1-201ENST00000420179 1854 ntBASIC1.92□□□□□ -2.1
SGCEO43556 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
SGCEO43556 RNU4-82P-201ENST00000362443 140 ntBASIC1.92□□□□□ -2.1
SGCEO43556 RNU6-97P-201ENST00000363387 104 ntBASIC1.92□□□□□ -2.1
SGCEO43556 RNA5SP125-201ENST00000364843 120 ntBASIC1.92□□□□□ -2.1
SGCEO43556 RNU1-39P-201ENST00000383897 165 ntBASIC1.92□□□□□ -2.1
SGCEO43556 RNU1-73P-201ENST00000383971 164 ntBASIC1.92□□□□□ -2.1
SGCEO43556 RPL17P50-201ENST00000396131 546 ntBASIC1.92□□□□□ -2.1
SGCEO43556 RN7SKP158-201ENST00000410453 326 ntBASIC1.92□□□□□ -2.1
SGCEO43556 MTND1P21-201ENST00000412991 285 ntBASIC1.92□□□□□ -2.1
SGCEO43556 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC1.92□□□□□ -2.1
SGCEO43556 AC003685.2-201ENST00000422795 395 ntBASIC1.92□□□□□ -2.1
SGCEO43556 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.92□□□□□ -2.1
SGCEO43556 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC1.92□□□□□ -2.1
SGCEO43556 SNRPEP9-201ENST00000436794 238 ntBASIC1.92□□□□□ -2.1
SGCEO43556 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.92□□□□□ -2.1
SGCEO43556 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC1.92□□□□□ -2.1
SGCEO43556 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC1.92□□□□□ -2.1
SGCEO43556 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.92□□□□□ -2.1
SGCEO43556 RNU6-717P-201ENST00000459076 104 ntBASIC1.92□□□□□ -2.1
SGCEO43556 TRBV1-201ENST00000476502 284 ntBASIC1.92□□□□□ -2.1
SGCEO43556 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
SGCEO43556 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC1.92□□□□□ -2.1
SGCEO43556 RPS27AP10-201ENST00000496103 208 ntBASIC1.92□□□□□ -2.1
SGCEO43556 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.92□□□□□ -2.1
SGCEO43556 HMGB1P28-201ENST00000507778 552 ntBASIC1.92□□□□□ -2.1
SGCEO43556 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC1.92□□□□□ -2.1
SGCEO43556 RNU6-583P-201ENST00000516012 92 ntBASIC1.92□□□□□ -2.1
SGCEO43556 RNA5SP200-201ENST00000516360 103 ntBASIC1.92□□□□□ -2.1
SGCEO43556 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC1.92□□□□□ -2.1
SGCEO43556 LRRC37A5P-203ENST00000580181 585 ntBASIC1.92□□□□□ -2.1
SGCEO43556 AL121917.1-203ENST00000605534 577 ntBASIC1.92□□□□□ -2.1
SGCEO43556 SDR42E1P2-201ENST00000614861 481 ntBASIC1.92□□□□□ -2.1
SGCEO43556 AL162373.1-201ENST00000620433 407 ntBASIC1.92□□□□□ -2.1
SGCEO43556 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC1.92□□□□□ -2.1
SGCEO43556 AC019226.1-201ENST00000625666 515 ntBASIC1.92□□□□□ -2.1
SGCEO43556 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.92□□□□□ -2.1
SGCEO43556 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
SGCEO43556 PAPPA-AS1-201ENST00000445861 2450 ntBASIC1.92□□□□□ -2.1
SGCEO43556 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.91□□□□□ -2.1
SGCEO43556 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
SGCEO43556 AL161781.1-201ENST00000354277 403 ntBASIC1.91□□□□□ -2.1
SGCEO43556 SNORA48.3-201ENST00000391081 134 ntBASIC1.91□□□□□ -2.1
SGCEO43556 RNA5SP270-201ENST00000411361 118 ntBASIC1.91□□□□□ -2.1
SGCEO43556 RNU6-516P-201ENST00000411381 104 ntBASIC1.91□□□□□ -2.1
SGCEO43556 AL030996.1-201ENST00000411430 235 ntBASIC1.91□□□□□ -2.1
SGCEO43556 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.91□□□□□ -2.1
SGCEO43556 BX276092.3-201ENST00000424182 230 ntBASIC1.91□□□□□ -2.1
SGCEO43556 MTCO2P1-201ENST00000424648 477 ntBASIC1.91□□□□□ -2.1
SGCEO43556 RPS3AP44-201ENST00000425466 790 ntBASIC1.91□□□□□ -2.1
SGCEO43556 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC1.91□□□□□ -2.1
SGCEO43556 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC1.91□□□□□ -2.1
SGCEO43556 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.91□□□□□ -2.1
SGCEO43556 AC104435.1-201ENST00000483483 166 ntBASIC1.91□□□□□ -2.1
SGCEO43556 AC109486.1-201ENST00000486833 374 ntBASIC1.91□□□□□ -2.1
SGCEO43556 GZMAP1-201ENST00000503054 631 ntBASIC1.91□□□□□ -2.1
SGCEO43556 MTCYBP16-201ENST00000509187 1129 ntBASIC1.91□□□□□ -2.1
SGCEO43556 LTV1P1-201ENST00000510683 1237 ntBASIC1.91□□□□□ -2.1
SGCEO43556 AC008837.1-201ENST00000511513 412 ntBASIC1.91□□□□□ -2.1
SGCEO43556 SNORD19.2-201ENST00000516978 73 ntBASIC1.91□□□□□ -2.1
SGCEO43556 RNA5SP290-201ENST00000517133 127 ntBASIC1.91□□□□□ -2.1
SGCEO43556 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.91□□□□□ -2.1
SGCEO43556 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
SGCEO43556 AC024619.4-201ENST00000580924 316 ntBASIC1.91□□□□□ -2.1
SGCEO43556 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC1.91□□□□□ -2.1
SGCEO43556 AC008749.1-201ENST00000597650 306 ntBASIC1.91□□□□□ -2.1
SGCEO43556 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC1.91□□□□□ -2.1
SGCEO43556 AC107294.1-201ENST00000609524 467 ntBASIC1.91□□□□□ -2.1
SGCEO43556 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC1.91□□□□□ -2.1
SGCEO43556 MIR6852-201ENST00000621699 66 ntBASIC1.91□□□□□ -2.1
SGCEO43556 MIR6873-201ENST00000622788 63 ntBASIC1.91□□□□□ -2.1
SGCEO43556 AC093591.3-201ENST00000634516 308 ntBASIC1.91□□□□□ -2.1
SGCEO43556 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
SGCEO43556 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.9□□□□□ -2.1
SGCEO43556 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
SGCEO43556 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 132.6 ms