Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.68□□□□□ -1.98
CDX4O14627 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CDX4O14627 DEFB108F-201ENST00000344638 222 ntBASIC2.67□□□□□ -1.98
CDX4O14627 RNU1-75P-201ENST00000347264 129 ntBASIC2.67□□□□□ -1.98
CDX4O14627 RNU6-501P-201ENST00000364072 100 ntBASIC2.67□□□□□ -1.98
CDX4O14627 Y_RNA.359-201ENST00000365498 102 ntBASIC2.67□□□□□ -1.98
CDX4O14627 RNU6-637P-201ENST00000384050 107 ntBASIC2.67□□□□□ -1.98
CDX4O14627 RNY3P10-201ENST00000384764 102 ntBASIC2.67□□□□□ -1.98
CDX4O14627 RNU1-101P-201ENST00000391171 127 ntBASIC2.67□□□□□ -1.98
CDX4O14627 AL139039.1-201ENST00000401900 692 ntBASIC2.67□□□□□ -1.98
CDX4O14627 AL354719.1-201ENST00000406535 843 ntBASIC2.67□□□□□ -1.98
CDX4O14627 HMGB3P23-201ENST00000414981 585 ntBASIC2.67□□□□□ -1.98
CDX4O14627 RPL32P35-201ENST00000415214 394 ntBASIC2.67□□□□□ -1.98
CDX4O14627 MTCO1P21-201ENST00000416634 589 ntBASIC2.67□□□□□ -1.98
CDX4O14627 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.67□□□□□ -1.98
CDX4O14627 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC2.67□□□□□ -1.98
CDX4O14627 AL365184.2-201ENST00000431139 435 ntBASIC2.67□□□□□ -1.98
CDX4O14627 RSU1P2-202ENST00000437884 485 ntBASIC2.67□□□□□ -1.98
CDX4O14627 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC2.67□□□□□ -1.98
CDX4O14627 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC2.67□□□□□ -1.98
CDX4O14627 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.67□□□□□ -1.98
CDX4O14627 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.67□□□□□ -1.98
CDX4O14627 OR6K1P-201ENST00000456766 971 ntBASIC2.67□□□□□ -1.98
CDX4O14627 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.67□□□□□ -1.98
CDX4O14627 AC010401.1-201ENST00000463867 348 ntBASIC2.67□□□□□ -1.98
CDX4O14627 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.67□□□□□ -1.98
CDX4O14627 MTND4LP22-201ENST00000508209 276 ntBASIC2.67□□□□□ -1.98
CDX4O14627 AC010265.1-201ENST00000513509 211 ntBASIC2.67□□□□□ -1.98
CDX4O14627 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.67□□□□□ -1.98
CDX4O14627 RNU6-711P-201ENST00000517255 106 ntBASIC2.67□□□□□ -1.98
CDX4O14627 RPL7P20-201ENST00000520308 745 ntBASIC2.67□□□□□ -1.98
CDX4O14627 AC022690.1-201ENST00000526681 550 ntBASIC2.67□□□□□ -1.98
CDX4O14627 DEFB108D-201ENST00000527787 222 ntBASIC2.67□□□□□ -1.98
CDX4O14627 AP003497.1-201ENST00000528472 562 ntBASIC2.67□□□□□ -1.98
CDX4O14627 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CDX4O14627 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC2.67□□□□□ -1.98
CDX4O14627 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.67□□□□□ -1.98
CDX4O14627 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.67□□□□□ -1.98
CDX4O14627 AC034268.2-201ENST00000571784 482 ntBASIC2.67□□□□□ -1.98
CDX4O14627 MIR3921-201ENST00000577308 85 ntBASIC2.67□□□□□ -1.98
CDX4O14627 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.67□□□□□ -1.98
CDX4O14627 MIR548AB-201ENST00000584917 84 ntBASIC2.67□□□□□ -1.98
CDX4O14627 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CDX4O14627 AC068790.6-201ENST00000602558 258 ntBASIC2.67□□□□□ -1.98
CDX4O14627 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.67□□□□□ -1.98
CDX4O14627 AC012360.2-201ENST00000609349 391 ntBASIC2.67□□□□□ -1.98
CDX4O14627 AC010678.1-201ENST00000614118 713 ntBASIC2.67□□□□□ -1.98
CDX4O14627 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.67□□□□□ -1.98
CDX4O14627 AC099842.1-201ENST00000619919 596 ntBASIC2.67□□□□□ -1.98
CDX4O14627 AC025034.2-201ENST00000623264 286 ntBASIC2.67□□□□□ -1.98
CDX4O14627 SNORA50A-202ENST00000629536 136 ntBASIC2.67□□□□□ -1.98
CDX4O14627 AC011460.1-201ENST00000636268 1834 ntBASIC2.67□□□□□ -1.98
CDX4O14627 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
CDX4O14627 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CDX4O14627 AC009902.3-201ENST00000606235 2172 ntBASIC2.67□□□□□ -1.98
CDX4O14627 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CDX4O14627 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC2.67□□□□□ -1.98
CDX4O14627 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.66□□□□□ -1.98
CDX4O14627 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CDX4O14627 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CDX4O14627 Y_RNA.505-201ENST00000384489 102 ntBASIC2.66□□□□□ -1.98
CDX4O14627 MIR592-201ENST00000384959 97 ntBASIC2.66□□□□□ -1.98
CDX4O14627 DEFB108C-201ENST00000400154 252 ntBASIC2.66□□□□□ -1.98
CDX4O14627 RPS3AP24-201ENST00000407896 734 ntBASIC2.66□□□□□ -1.98
CDX4O14627 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC2.66□□□□□ -1.98
CDX4O14627 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC2.66□□□□□ -1.98
CDX4O14627 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CDX4O14627 SSXP9-201ENST00000417503 292 ntBASIC2.66□□□□□ -1.98
CDX4O14627 Z98742.3-201ENST00000418637 326 ntBASIC2.66□□□□□ -1.98
CDX4O14627 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC2.66□□□□□ -1.98
CDX4O14627 UBE2D3P2-201ENST00000424409 445 ntBASIC2.66□□□□□ -1.98
CDX4O14627 BX679664.1-201ENST00000434429 253 ntBASIC2.66□□□□□ -1.98
CDX4O14627 AC024082.2-201ENST00000434771 238 ntBASIC2.66□□□□□ -1.98
CDX4O14627 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.66□□□□□ -1.98
CDX4O14627 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC2.66□□□□□ -1.98
CDX4O14627 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC2.66□□□□□ -1.98
CDX4O14627 BMI1P1-201ENST00000445879 941 ntBASIC2.66□□□□□ -1.98
CDX4O14627 ELOCP30-201ENST00000447108 299 ntBASIC2.66□□□□□ -1.98
CDX4O14627 AL592447.1-201ENST00000447592 540 ntBASIC2.66□□□□□ -1.98
CDX4O14627 ST13P20-201ENST00000447996 1065 ntBASIC2.66□□□□□ -1.98
CDX4O14627 AC108860.1-201ENST00000484521 383 ntBASIC2.66□□□□□ -1.98
CDX4O14627 RN7SL633P-201ENST00000488974 297 ntBASIC2.66□□□□□ -1.98
CDX4O14627 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.66□□□□□ -1.98
CDX4O14627 CBX3P3-201ENST00000508108 532 ntBASIC2.66□□□□□ -1.98
CDX4O14627 AC079140.3-201ENST00000511111 550 ntBASIC2.66□□□□□ -1.98
CDX4O14627 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.66□□□□□ -1.98
CDX4O14627 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.66□□□□□ -1.98
CDX4O14627 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.66□□□□□ -1.98
CDX4O14627 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.66□□□□□ -1.98
CDX4O14627 AC011602.1-201ENST00000546484 331 ntBASIC2.66□□□□□ -1.98
CDX4O14627 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.66□□□□□ -1.98
CDX4O14627 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.66□□□□□ -1.98
CDX4O14627 MED28P6-201ENST00000558776 231 ntBASIC2.66□□□□□ -1.98
CDX4O14627 PCMTD1P2-201ENST00000565017 355 ntBASIC2.66□□□□□ -1.98
CDX4O14627 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.66□□□□□ -1.98
CDX4O14627 AC012065.4-201ENST00000602445 679 ntBASIC2.66□□□□□ -1.98
CDX4O14627 AC068276.1-201ENST00000605793 379 ntBASIC2.66□□□□□ -1.98
CDX4O14627 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.66□□□□□ -1.98
CDX4O14627 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.66□□□□□ -1.98
CDX4O14627 RMST_8.1-201ENST00000610287 165 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms