Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 RNU6-720P-201ENST00000516363 108 ntBASIC2.67□□□□□ -1.98
SRRM4A7MD48 RNU2-46P-201ENST00000517038 113 ntBASIC2.67□□□□□ -1.98
SRRM4A7MD48 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.67□□□□□ -1.98
SRRM4A7MD48 AC026403.1-201ENST00000518938 295 ntBASIC2.67□□□□□ -1.98
SRRM4A7MD48 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.67□□□□□ -1.98
SRRM4A7MD48 AC068657.1-201ENST00000520807 306 ntBASIC2.67□□□□□ -1.98
SRRM4A7MD48 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.67□□□□□ -1.98
SRRM4A7MD48 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.67□□□□□ -1.98
SRRM4A7MD48 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.67□□□□□ -1.98
SRRM4A7MD48 ARL2BPP2-201ENST00000550907 489 ntBASIC2.67□□□□□ -1.98
SRRM4A7MD48 AC087883.1-201ENST00000551882 391 ntBASIC2.67□□□□□ -1.98
SRRM4A7MD48 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.67□□□□□ -1.98
SRRM4A7MD48 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.67□□□□□ -1.98
SRRM4A7MD48 AC015917.1-201ENST00000579654 510 ntBASIC2.67□□□□□ -1.98
SRRM4A7MD48 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC2.67□□□□□ -1.98
SRRM4A7MD48 AC087683.1-201ENST00000591187 441 ntBASIC2.67□□□□□ -1.98
SRRM4A7MD48 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC2.67□□□□□ -1.98
SRRM4A7MD48 AC245014.2-201ENST00000603689 287 ntBASIC2.67□□□□□ -1.98
SRRM4A7MD48 NUTF2P8-201ENST00000604593 363 ntBASIC2.67□□□□□ -1.98
SRRM4A7MD48 AC246785.4-201ENST00000605374 287 ntBASIC2.67□□□□□ -1.98
SRRM4A7MD48 AP002360.4-201ENST00000606980 481 ntBASIC2.67□□□□□ -1.98
SRRM4A7MD48 AC107294.3-201ENST00000609211 526 ntBASIC2.67□□□□□ -1.98
SRRM4A7MD48 uc_338.1-201ENST00000612113 180 ntBASIC2.67□□□□□ -1.98
SRRM4A7MD48 AL133173.2-201ENST00000614270 90 ntBASIC2.67□□□□□ -1.98
SRRM4A7MD48 AC015540.1-201ENST00000615828 501 ntBASIC2.67□□□□□ -1.98
SRRM4A7MD48 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
SRRM4A7MD48 AC072046.2-201ENST00000618366 268 ntBASIC2.67□□□□□ -1.98
SRRM4A7MD48 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.67□□□□□ -1.98
SRRM4A7MD48 GABRG2-229ENST00000641017 3628 ntBASIC2.67□□□□□ -1.98
SRRM4A7MD48 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.67□□□□□ -1.98
SRRM4A7MD48 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
SRRM4A7MD48 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.67□□□□□ -1.98
SRRM4A7MD48 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.67□□□□□ -1.98
SRRM4A7MD48 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.67□□□□□ -1.98
SRRM4A7MD48 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.66□□□□□ -1.98
SRRM4A7MD48 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
SRRM4A7MD48 API5P2-201ENST00000397055 1498 ntBASIC2.66□□□□□ -1.98
SRRM4A7MD48 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
SRRM4A7MD48 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
SRRM4A7MD48 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC2.66□□□□□ -1.98
SRRM4A7MD48 UBE2L2-201ENST00000254302 429 ntBASIC2.66□□□□□ -1.98
SRRM4A7MD48 Y_RNA.3-201ENST00000362331 103 ntBASIC2.66□□□□□ -1.98
SRRM4A7MD48 RNU5E-1-201ENST00000362477 120 ntBASIC2.66□□□□□ -1.98
SRRM4A7MD48 RNA5SP383-201ENST00000362934 120 ntBASIC2.66□□□□□ -1.98
SRRM4A7MD48 RNU2-36P-201ENST00000410361 191 ntBASIC2.66□□□□□ -1.98
SRRM4A7MD48 AC007899.1-201ENST00000412776 775 ntBASIC2.66□□□□□ -1.98
SRRM4A7MD48 NDUFS5P4-201ENST00000412983 318 ntBASIC2.66□□□□□ -1.98
SRRM4A7MD48 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.66□□□□□ -1.98
SRRM4A7MD48 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC2.66□□□□□ -1.98
SRRM4A7MD48 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC2.66□□□□□ -1.98
SRRM4A7MD48 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.66□□□□□ -1.98
SRRM4A7MD48 ISCA1P1-201ENST00000426679 387 ntBASIC2.66□□□□□ -1.98
SRRM4A7MD48 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.66□□□□□ -1.98
SRRM4A7MD48 MED13P1-201ENST00000428342 171 ntBASIC2.66□□□□□ -1.98
SRRM4A7MD48 AC091286.1-201ENST00000431233 461 ntBASIC2.66□□□□□ -1.98
SRRM4A7MD48 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.66□□□□□ -1.98
SRRM4A7MD48 AL714022.1-201ENST00000439897 151 ntBASIC2.66□□□□□ -1.98
SRRM4A7MD48 MTND4P25-201ENST00000441039 533 ntBASIC2.66□□□□□ -1.98
SRRM4A7MD48 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.66□□□□□ -1.98
SRRM4A7MD48 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC2.66□□□□□ -1.98
SRRM4A7MD48 AC011825.1-201ENST00000484967 388 ntBASIC2.66□□□□□ -1.98
SRRM4A7MD48 AC093663.1-201ENST00000497190 394 ntBASIC2.66□□□□□ -1.98
SRRM4A7MD48 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC2.66□□□□□ -1.98
SRRM4A7MD48 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC2.66□□□□□ -1.98
SRRM4A7MD48 MTND4LP22-201ENST00000508209 276 ntBASIC2.66□□□□□ -1.98
SRRM4A7MD48 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC2.66□□□□□ -1.98
SRRM4A7MD48 APOOP4-201ENST00000513530 597 ntBASIC2.66□□□□□ -1.98
SRRM4A7MD48 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.66□□□□□ -1.98
SRRM4A7MD48 MTND1P5-201ENST00000517906 940 ntBASIC2.66□□□□□ -1.98
SRRM4A7MD48 SUB1P1-201ENST00000524415 382 ntBASIC2.66□□□□□ -1.98
SRRM4A7MD48 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC2.66□□□□□ -1.98
SRRM4A7MD48 AC007458.1-201ENST00000542812 373 ntBASIC2.66□□□□□ -1.98
SRRM4A7MD48 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC2.66□□□□□ -1.98
SRRM4A7MD48 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.66□□□□□ -1.98
SRRM4A7MD48 AC037471.2-201ENST00000564941 598 ntBASIC2.66□□□□□ -1.98
SRRM4A7MD48 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC2.66□□□□□ -1.98
SRRM4A7MD48 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC2.66□□□□□ -1.98
SRRM4A7MD48 BNIP3P9-201ENST00000603714 553 ntBASIC2.66□□□□□ -1.98
SRRM4A7MD48 AC098826.3-201ENST00000603823 466 ntBASIC2.66□□□□□ -1.98
SRRM4A7MD48 AL136363.2-201ENST00000604173 851 ntBASIC2.66□□□□□ -1.98
SRRM4A7MD48 AC107304.1-201ENST00000604229 296 ntBASIC2.66□□□□□ -1.98
SRRM4A7MD48 AL161798.1-201ENST00000604630 131 ntBASIC2.66□□□□□ -1.98
SRRM4A7MD48 AC090578.1-201ENST00000604955 591 ntBASIC2.66□□□□□ -1.98
SRRM4A7MD48 AL161734.1-201ENST00000609720 557 ntBASIC2.66□□□□□ -1.98
SRRM4A7MD48 SNORD39.4-201ENST00000620099 78 ntBASIC2.66□□□□□ -1.98
SRRM4A7MD48 AL589994.2-201ENST00000621124 579 ntBASIC2.66□□□□□ -1.98
SRRM4A7MD48 AC099506.2-201ENST00000623074 221 ntBASIC2.66□□□□□ -1.98
SRRM4A7MD48 AC068880.5-201ENST00000624331 290 ntBASIC2.66□□□□□ -1.98
SRRM4A7MD48 TEX41-300ENST00000631048 69 ntTSL 5 BASIC2.66□□□□□ -1.98
SRRM4A7MD48 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
SRRM4A7MD48 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2.65□□□□□ -1.98
SRRM4A7MD48 TEX21P-201ENST00000447107 1476 ntBASIC2.65□□□□□ -1.98
SRRM4A7MD48 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
SRRM4A7MD48 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.98
SRRM4A7MD48 AC027514.1-201ENST00000588561 1603 ntBASIC2.65□□□□□ -1.98
SRRM4A7MD48 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.65□□□□□ -1.98
SRRM4A7MD48 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.65□□□□□ -1.99
SRRM4A7MD48 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
SRRM4A7MD48 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.65□□□□□ -1.99
SRRM4A7MD48 FTLP6-201ENST00000355274 422 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms