Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
C4orf47A7E2U8 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
C4orf47A7E2U8 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
C4orf47A7E2U8 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.5□□□□□ -1.85
C4orf47A7E2U8 OTUD4P1-201ENST00000237841 3067 ntBASIC3.5□□□□□ -1.85
C4orf47A7E2U8 AP001350.1-201ENST00000601906 1524 ntBASIC3.5□□□□□ -1.85
C4orf47A7E2U8 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
C4orf47A7E2U8 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
C4orf47A7E2U8 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
C4orf47A7E2U8 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.5□□□□□ -1.85
C4orf47A7E2U8 Y_RNA.166-201ENST00000363730 102 ntBASIC3.5□□□□□ -1.85
C4orf47A7E2U8 RNU4-1-201ENST00000363925 141 ntBASIC3.5□□□□□ -1.85
C4orf47A7E2U8 Y_RNA.326-201ENST00000365176 113 ntBASIC3.5□□□□□ -1.85
C4orf47A7E2U8 SNORA69-201ENST00000383895 132 ntBASIC3.5□□□□□ -1.85
C4orf47A7E2U8 Y_RNA.419-201ENST00000384041 102 ntBASIC3.5□□□□□ -1.85
C4orf47A7E2U8 Y_RNA.493-201ENST00000384422 102 ntBASIC3.5□□□□□ -1.85
C4orf47A7E2U8 MT-TC-201ENST00000387405 66 ntBASIC3.5□□□□□ -1.85
C4orf47A7E2U8 RNU6-1158P-201ENST00000391167 107 ntBASIC3.5□□□□□ -1.85
C4orf47A7E2U8 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.5□□□□□ -1.85
C4orf47A7E2U8 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.5□□□□□ -1.85
C4orf47A7E2U8 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.5□□□□□ -1.85
C4orf47A7E2U8 AC127526.1-201ENST00000417526 366 ntBASIC3.5□□□□□ -1.85
C4orf47A7E2U8 AF228730.2-201ENST00000438784 848 ntBASIC3.5□□□□□ -1.85
C4orf47A7E2U8 AL356535.1-201ENST00000440335 398 ntBASIC3.5□□□□□ -1.85
C4orf47A7E2U8 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.5□□□□□ -1.85
C4orf47A7E2U8 AL136380.1-201ENST00000447970 162 ntBASIC3.5□□□□□ -1.85
C4orf47A7E2U8 AC140076.1-201ENST00000449897 361 ntBASIC3.5□□□□□ -1.85
C4orf47A7E2U8 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.5□□□□□ -1.85
C4orf47A7E2U8 snoU13.3-201ENST00000459441 104 ntBASIC3.5□□□□□ -1.85
C4orf47A7E2U8 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.5□□□□□ -1.85
C4orf47A7E2U8 RPS3AP50-201ENST00000487064 803 ntBASIC3.5□□□□□ -1.85
C4orf47A7E2U8 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.5□□□□□ -1.85
C4orf47A7E2U8 MTND5P5-201ENST00000503764 376 ntBASIC3.5□□□□□ -1.85
C4orf47A7E2U8 RNU6-1220P-201ENST00000517126 108 ntBASIC3.5□□□□□ -1.85
C4orf47A7E2U8 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.5□□□□□ -1.85
C4orf47A7E2U8 AP003385.6-201ENST00000531603 374 ntBASIC3.5□□□□□ -1.85
C4orf47A7E2U8 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
C4orf47A7E2U8 AC243972.3-201ENST00000539655 198 ntBASIC3.5□□□□□ -1.85
C4orf47A7E2U8 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.5□□□□□ -1.85
C4orf47A7E2U8 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.5□□□□□ -1.85
C4orf47A7E2U8 AC012182.1-201ENST00000570133 895 ntBASIC3.5□□□□□ -1.85
C4orf47A7E2U8 MIR5680-201ENST00000577577 84 ntBASIC3.5□□□□□ -1.85
C4orf47A7E2U8 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.5□□□□□ -1.85
C4orf47A7E2U8 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.5□□□□□ -1.85
C4orf47A7E2U8 AL669831.4-202ENST00000590817 238 ntBASIC3.5□□□□□ -1.85
C4orf47A7E2U8 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.5□□□□□ -1.85
C4orf47A7E2U8 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.5□□□□□ -1.85
C4orf47A7E2U8 Y_RNA.812-201ENST00000610788 101 ntBASIC3.5□□□□□ -1.85
C4orf47A7E2U8 Y_RNA.784-201ENST00000613803 101 ntBASIC3.5□□□□□ -1.85
C4orf47A7E2U8 Y_RNA.787-201ENST00000616522 101 ntBASIC3.5□□□□□ -1.85
C4orf47A7E2U8 Y_RNA.780-201ENST00000617336 101 ntBASIC3.5□□□□□ -1.85
C4orf47A7E2U8 Y_RNA.801-201ENST00000619005 101 ntBASIC3.5□□□□□ -1.85
C4orf47A7E2U8 U4.6-201ENST00000621618 127 ntBASIC3.5□□□□□ -1.85
C4orf47A7E2U8 AC091953.2-201ENST00000623979 160 ntBASIC3.5□□□□□ -1.85
C4orf47A7E2U8 AC009161.2-201ENST00000624626 138 ntBASIC3.5□□□□□ -1.85
C4orf47A7E2U8 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.5□□□□□ -1.85
C4orf47A7E2U8 AC092125.1-201ENST00000562568 1995 ntBASIC3.5□□□□□ -1.85
C4orf47A7E2U8 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
C4orf47A7E2U8 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
C4orf47A7E2U8 ZNF807-201ENST00000328088 1707 ntBASIC3.5□□□□□ -1.85
C4orf47A7E2U8 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
C4orf47A7E2U8 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
C4orf47A7E2U8 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.49□□□□□ -1.85
C4orf47A7E2U8 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
C4orf47A7E2U8 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
C4orf47A7E2U8 AC006504.1-201ENST00000562493 3666 ntBASIC3.49□□□□□ -1.85
C4orf47A7E2U8 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
C4orf47A7E2U8 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
C4orf47A7E2U8 RNA5SP258-201ENST00000362750 119 ntBASIC3.49□□□□□ -1.85
C4orf47A7E2U8 Y_RNA.234-201ENST00000364409 97 ntBASIC3.49□□□□□ -1.85
C4orf47A7E2U8 RNU6-1207P-201ENST00000384343 107 ntBASIC3.49□□□□□ -1.85
C4orf47A7E2U8 AL590004.1-201ENST00000405321 300 ntBASIC3.49□□□□□ -1.85
C4orf47A7E2U8 RNU2-15P-201ENST00000410692 191 ntBASIC3.49□□□□□ -1.85
C4orf47A7E2U8 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.49□□□□□ -1.85
C4orf47A7E2U8 RPL21P66-201ENST00000426566 466 ntBASIC3.49□□□□□ -1.85
C4orf47A7E2U8 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.49□□□□□ -1.85
C4orf47A7E2U8 AC006028.1-201ENST00000438379 402 ntBASIC3.49□□□□□ -1.85
C4orf47A7E2U8 AC016691.1-201ENST00000441321 413 ntBASIC3.49□□□□□ -1.85
C4orf47A7E2U8 MTCYBP6-201ENST00000441810 138 ntBASIC3.49□□□□□ -1.85
C4orf47A7E2U8 MTND4P19-201ENST00000446659 478 ntBASIC3.49□□□□□ -1.85
C4orf47A7E2U8 AP1S2P1-201ENST00000457344 379 ntBASIC3.49□□□□□ -1.85
C4orf47A7E2U8 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.49□□□□□ -1.85
C4orf47A7E2U8 snoU13.8-201ENST00000458890 104 ntBASIC3.49□□□□□ -1.85
C4orf47A7E2U8 S100A11P2-201ENST00000467589 312 ntBASIC3.49□□□□□ -1.85
C4orf47A7E2U8 AC084198.1-201ENST00000477747 402 ntBASIC3.49□□□□□ -1.85
C4orf47A7E2U8 AC096576.1-201ENST00000489014 359 ntBASIC3.49□□□□□ -1.85
C4orf47A7E2U8 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.49□□□□□ -1.85
C4orf47A7E2U8 AC010587.1-201ENST00000505809 469 ntBASIC3.49□□□□□ -1.85
C4orf47A7E2U8 RNA5SP401-201ENST00000515920 127 ntBASIC3.49□□□□□ -1.85
C4orf47A7E2U8 RNU6-1073P-201ENST00000517182 106 ntBASIC3.49□□□□□ -1.85
C4orf47A7E2U8 AC105029.1-201ENST00000520250 669 ntBASIC3.49□□□□□ -1.85
C4orf47A7E2U8 AP003072.1-201ENST00000531740 145 ntBASIC3.49□□□□□ -1.85
C4orf47A7E2U8 OR5B19P-201ENST00000531766 928 ntBASIC3.49□□□□□ -1.85
C4orf47A7E2U8 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.49□□□□□ -1.85
C4orf47A7E2U8 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.49□□□□□ -1.85
C4orf47A7E2U8 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.49□□□□□ -1.85
C4orf47A7E2U8 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC3.49□□□□□ -1.85
C4orf47A7E2U8 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.49□□□□□ -1.85
C4orf47A7E2U8 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.49□□□□□ -1.85
C4orf47A7E2U8 AL355812.1-201ENST00000603215 216 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms