Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
TCRBV7S3A2A0A539 AC098591.2-201ENST00000510152 315 ntBASIC3.45□□□□□ -1.86
TCRBV7S3A2A0A539 AC108078.2-201ENST00000510750 236 ntBASIC3.45□□□□□ -1.86
TCRBV7S3A2A0A539 AL359273.1-201ENST00000510918 627 ntBASIC3.45□□□□□ -1.86
TCRBV7S3A2A0A539 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.45□□□□□ -1.86
TCRBV7S3A2A0A539 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.45□□□□□ -1.86
TCRBV7S3A2A0A539 RNU6-927P-201ENST00000516199 100 ntBASIC3.45□□□□□ -1.86
TCRBV7S3A2A0A539 RNU1-95P-201ENST00000516357 160 ntBASIC3.45□□□□□ -1.86
TCRBV7S3A2A0A539 RNU1-128P-201ENST00000516704 160 ntBASIC3.45□□□□□ -1.86
TCRBV7S3A2A0A539 AC104027.1-201ENST00000521887 300 ntBASIC3.45□□□□□ -1.86
TCRBV7S3A2A0A539 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.45□□□□□ -1.86
TCRBV7S3A2A0A539 OR5AL2P-201ENST00000532185 920 ntBASIC3.45□□□□□ -1.86
TCRBV7S3A2A0A539 NRBF2P5-201ENST00000603087 788 ntBASIC3.45□□□□□ -1.86
TCRBV7S3A2A0A539 AC104763.2-201ENST00000604179 382 ntBASIC3.45□□□□□ -1.86
TCRBV7S3A2A0A539 AP002826.1-201ENST00000608835 315 ntBASIC3.45□□□□□ -1.86
TCRBV7S3A2A0A539 AC006023.2-201ENST00000609916 167 ntBASIC3.45□□□□□ -1.86
TCRBV7S3A2A0A539 DISC2.1-201ENST00000612827 205 ntBASIC3.45□□□□□ -1.86
TCRBV7S3A2A0A539 AC130324.3-201ENST00000614165 542 ntBASIC3.45□□□□□ -1.86
TCRBV7S3A2A0A539 AL391261.4-201ENST00000616012 481 ntBASIC3.45□□□□□ -1.86
TCRBV7S3A2A0A539 AL589994.2-201ENST00000621124 579 ntBASIC3.45□□□□□ -1.86
TCRBV7S3A2A0A539 AC024940.5-201ENST00000622889 474 ntBASIC3.45□□□□□ -1.86
TCRBV7S3A2A0A539 AC011155.2-201ENST00000623202 216 ntBASIC3.45□□□□□ -1.86
TCRBV7S3A2A0A539 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
TCRBV7S3A2A0A539 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
TCRBV7S3A2A0A539 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
TCRBV7S3A2A0A539 API5P2-201ENST00000397055 1498 ntBASIC3.44□□□□□ -1.86
TCRBV7S3A2A0A539 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
TCRBV7S3A2A0A539 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
TCRBV7S3A2A0A539 RNU1-75P-201ENST00000347264 129 ntBASIC3.44□□□□□ -1.86
TCRBV7S3A2A0A539 RN7SKP227-201ENST00000364445 330 ntBASIC3.44□□□□□ -1.86
TCRBV7S3A2A0A539 RNU6-1029P-201ENST00000384109 107 ntBASIC3.44□□□□□ -1.86
TCRBV7S3A2A0A539 RNU6-817P-201ENST00000391083 104 ntBASIC3.44□□□□□ -1.86
TCRBV7S3A2A0A539 RNU2-29P-201ENST00000410423 189 ntBASIC3.44□□□□□ -1.86
TCRBV7S3A2A0A539 RNU2-71P-201ENST00000411395 189 ntBASIC3.44□□□□□ -1.86
TCRBV7S3A2A0A539 RAB9AP3-201ENST00000412737 573 ntBASIC3.44□□□□□ -1.86
TCRBV7S3A2A0A539 RPL31P12-201ENST00000422587 358 ntBASIC3.44□□□□□ -1.86
TCRBV7S3A2A0A539 RPL7L1P10-201ENST00000427790 463 ntBASIC3.44□□□□□ -1.86
TCRBV7S3A2A0A539 AL353572.1-201ENST00000442490 417 ntBASIC3.44□□□□□ -1.86
TCRBV7S3A2A0A539 NEFMP1-201ENST00000443423 1006 ntBASIC3.44□□□□□ -1.86
TCRBV7S3A2A0A539 VN1R34P-201ENST00000447387 883 ntBASIC3.44□□□□□ -1.86
TCRBV7S3A2A0A539 MTND1P18-201ENST00000448191 573 ntBASIC3.44□□□□□ -1.86
TCRBV7S3A2A0A539 RAB9AP1-201ENST00000449393 573 ntBASIC3.44□□□□□ -1.86
TCRBV7S3A2A0A539 HMGN1P18-201ENST00000457642 277 ntBASIC3.44□□□□□ -1.86
TCRBV7S3A2A0A539 SNORD105B-201ENST00000458770 79 ntBASIC3.44□□□□□ -1.86
TCRBV7S3A2A0A539 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.44□□□□□ -1.86
TCRBV7S3A2A0A539 AC092436.1-201ENST00000506450 503 ntBASIC3.44□□□□□ -1.86
TCRBV7S3A2A0A539 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
TCRBV7S3A2A0A539 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.44□□□□□ -1.86
TCRBV7S3A2A0A539 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
TCRBV7S3A2A0A539 RNA5SP401-201ENST00000515920 127 ntBASIC3.44□□□□□ -1.86
TCRBV7S3A2A0A539 RN7SKP18-201ENST00000516005 275 ntBASIC3.44□□□□□ -1.86
TCRBV7S3A2A0A539 SNORA70.16-201ENST00000516390 95 ntBASIC3.44□□□□□ -1.86
TCRBV7S3A2A0A539 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.44□□□□□ -1.86
TCRBV7S3A2A0A539 SNORD60.2-201ENST00000516883 86 ntBASIC3.44□□□□□ -1.86
TCRBV7S3A2A0A539 IGKV2-26-201ENST00000518305 343 ntBASIC3.44□□□□□ -1.86
TCRBV7S3A2A0A539 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.44□□□□□ -1.86
TCRBV7S3A2A0A539 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.44□□□□□ -1.86
TCRBV7S3A2A0A539 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.44□□□□□ -1.86
TCRBV7S3A2A0A539 AL138976.2-201ENST00000563989 694 ntBASIC3.44□□□□□ -1.86
TCRBV7S3A2A0A539 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3.44□□□□□ -1.86
TCRBV7S3A2A0A539 AC007619.2-201ENST00000605743 379 ntBASIC3.44□□□□□ -1.86
TCRBV7S3A2A0A539 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.44□□□□□ -1.86
TCRBV7S3A2A0A539 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.44□□□□□ -1.86
TCRBV7S3A2A0A539 AC007496.3-201ENST00000624987 3443 ntBASIC3.44□□□□□ -1.86
TCRBV7S3A2A0A539 AL356274.2-201ENST00000624379 3752 ntBASIC3.44□□□□□ -1.86
TCRBV7S3A2A0A539 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
TCRBV7S3A2A0A539 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
TCRBV7S3A2A0A539 PWAR6-201ENST00000552334 4618 ntBASIC3.43□□□□□ -1.86
TCRBV7S3A2A0A539 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
TCRBV7S3A2A0A539 RNU4-35P-201ENST00000362588 141 ntBASIC3.43□□□□□ -1.86
TCRBV7S3A2A0A539 SNORA5A-201ENST00000384111 134 ntBASIC3.43□□□□□ -1.86
TCRBV7S3A2A0A539 Y_RNA.576-201ENST00000384781 102 ntBASIC3.43□□□□□ -1.86
TCRBV7S3A2A0A539 RNU6-903P-201ENST00000391270 109 ntBASIC3.43□□□□□ -1.86
TCRBV7S3A2A0A539 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.43□□□□□ -1.86
TCRBV7S3A2A0A539 RNA5SP118-201ENST00000410385 109 ntBASIC3.43□□□□□ -1.86
TCRBV7S3A2A0A539 Y_RNA.604-201ENST00000410574 102 ntBASIC3.43□□□□□ -1.86
TCRBV7S3A2A0A539 AC093578.1-201ENST00000415219 368 ntBASIC3.43□□□□□ -1.86
TCRBV7S3A2A0A539 AL109913.1-201ENST00000421173 514 ntBASIC3.43□□□□□ -1.86
TCRBV7S3A2A0A539 AL139413.1-201ENST00000421309 217 ntBASIC3.43□□□□□ -1.86
TCRBV7S3A2A0A539 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.43□□□□□ -1.86
TCRBV7S3A2A0A539 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.43□□□□□ -1.86
TCRBV7S3A2A0A539 HMGB3P11-201ENST00000440127 604 ntBASIC3.43□□□□□ -1.86
TCRBV7S3A2A0A539 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.43□□□□□ -1.86
TCRBV7S3A2A0A539 AC006539.3-201ENST00000454258 129 ntBASIC3.43□□□□□ -1.86
TCRBV7S3A2A0A539 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.43□□□□□ -1.86
TCRBV7S3A2A0A539 RPS29P15-201ENST00000458329 171 ntBASIC3.43□□□□□ -1.86
TCRBV7S3A2A0A539 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.43□□□□□ -1.86
TCRBV7S3A2A0A539 AC087588.1-201ENST00000462203 316 ntBASIC3.43□□□□□ -1.86
TCRBV7S3A2A0A539 VN1R17P-201ENST00000472048 1090 ntBASIC3.43□□□□□ -1.86
TCRBV7S3A2A0A539 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.43□□□□□ -1.86
TCRBV7S3A2A0A539 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.43□□□□□ -1.86
TCRBV7S3A2A0A539 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.43□□□□□ -1.86
TCRBV7S3A2A0A539 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.43□□□□□ -1.86
TCRBV7S3A2A0A539 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.43□□□□□ -1.86
TCRBV7S3A2A0A539 RNA5SP503-201ENST00000517047 117 ntBASIC3.43□□□□□ -1.86
TCRBV7S3A2A0A539 RNU6-685P-201ENST00000517088 95 ntBASIC3.43□□□□□ -1.86
TCRBV7S3A2A0A539 SCARNA20.6-201ENST00000517251 106 ntBASIC3.43□□□□□ -1.86
TCRBV7S3A2A0A539 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.43□□□□□ -1.86
TCRBV7S3A2A0A539 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.43□□□□□ -1.86
TCRBV7S3A2A0A539 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 151.7 ms