Protein–RNA interactions for Protein: A0A0B4J280

TRAV40, T-cell receptor alpha variable 40 (Fragment), humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40A0A0B4J280 RPS27AP8-201ENST00000452665 445 ntBASIC2.01□□□□□ -2.09
TRAV40A0A0B4J280 AC027673.1-201ENST00000456245 405 ntBASIC2.01□□□□□ -2.09
TRAV40A0A0B4J280 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.01□□□□□ -2.09
TRAV40A0A0B4J280 RNA5SP310-201ENST00000459084 116 ntBASIC2.01□□□□□ -2.09
TRAV40A0A0B4J280 RPS23P3-201ENST00000470993 430 ntBASIC2.01□□□□□ -2.09
TRAV40A0A0B4J280 MTND3P7-201ENST00000474435 343 ntBASIC2.01□□□□□ -2.09
TRAV40A0A0B4J280 AC126182.1-201ENST00000478134 357 ntBASIC2.01□□□□□ -2.09
TRAV40A0A0B4J280 AC087190.1-201ENST00000484462 480 ntBASIC2.01□□□□□ -2.09
TRAV40A0A0B4J280 RPS15AP36-201ENST00000492022 382 ntBASIC2.01□□□□□ -2.09
TRAV40A0A0B4J280 AC106872.3-201ENST00000495104 446 ntBASIC2.01□□□□□ -2.09
TRAV40A0A0B4J280 RN7SL636P-201ENST00000497504 294 ntBASIC2.01□□□□□ -2.09
TRAV40A0A0B4J280 AC022447.3-201ENST00000506865 495 ntBASIC2.01□□□□□ -2.09
TRAV40A0A0B4J280 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
TRAV40A0A0B4J280 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC2.01□□□□□ -2.09
TRAV40A0A0B4J280 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.01□□□□□ -2.09
TRAV40A0A0B4J280 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.01□□□□□ -2.09
TRAV40A0A0B4J280 RNU6-678P-201ENST00000516832 109 ntBASIC2.01□□□□□ -2.09
TRAV40A0A0B4J280 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC2.01□□□□□ -2.09
TRAV40A0A0B4J280 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.01□□□□□ -2.09
TRAV40A0A0B4J280 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC2.01□□□□□ -2.09
TRAV40A0A0B4J280 ZNF519P3-201ENST00000557158 1032 ntBASIC2.01□□□□□ -2.09
TRAV40A0A0B4J280 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.01□□□□□ -2.09
TRAV40A0A0B4J280 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.01□□□□□ -2.09
TRAV40A0A0B4J280 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.01□□□□□ -2.09
TRAV40A0A0B4J280 SNORD53-201ENST00000579969 78 ntBASIC2.01□□□□□ -2.09
TRAV40A0A0B4J280 AP001004.1-201ENST00000582468 324 ntBASIC2.01□□□□□ -2.09
TRAV40A0A0B4J280 MIR5092-201ENST00000583139 88 ntBASIC2.01□□□□□ -2.09
TRAV40A0A0B4J280 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.01□□□□□ -2.09
TRAV40A0A0B4J280 AC004987.4-201ENST00000603383 338 ntBASIC2.01□□□□□ -2.09
TRAV40A0A0B4J280 AL022161.1-201ENST00000604390 213 ntBASIC2.01□□□□□ -2.09
TRAV40A0A0B4J280 AL031775.1-201ENST00000607014 887 ntBASIC2.01□□□□□ -2.09
TRAV40A0A0B4J280 AC006023.2-201ENST00000609916 167 ntBASIC2.01□□□□□ -2.09
TRAV40A0A0B4J280 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.01□□□□□ -2.09
TRAV40A0A0B4J280 AC027807.2-201ENST00000616099 408 ntBASIC2.01□□□□□ -2.09
TRAV40A0A0B4J280 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.01□□□□□ -2.09
TRAV40A0A0B4J280 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.01□□□□□ -2.09
TRAV40A0A0B4J280 AC019226.1-201ENST00000625666 515 ntBASIC2.01□□□□□ -2.09
TRAV40A0A0B4J280 AC007256.1-201ENST00000392253 2765 ntBASIC2.01□□□□□ -2.09
TRAV40A0A0B4J280 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
TRAV40A0A0B4J280 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.01□□□□□ -2.09
TRAV40A0A0B4J280 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
TRAV40A0A0B4J280 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
TRAV40A0A0B4J280 MTCO1P9-201ENST00000505577 1534 ntBASIC2.01□□□□□ -2.09
TRAV40A0A0B4J280 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
TRAV40A0A0B4J280 AC009902.3-201ENST00000606235 2172 ntBASIC2□□□□□ -2.09
TRAV40A0A0B4J280 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
TRAV40A0A0B4J280 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
TRAV40A0A0B4J280 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
TRAV40A0A0B4J280 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
TRAV40A0A0B4J280 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
TRAV40A0A0B4J280 SNORA23-201ENST00000365128 182 ntBASIC2□□□□□ -2.09
TRAV40A0A0B4J280 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2□□□□□ -2.09
TRAV40A0A0B4J280 RNU6-637P-201ENST00000384050 107 ntBASIC2□□□□□ -2.09
TRAV40A0A0B4J280 SNORA67.4-201ENST00000384688 142 ntBASIC2□□□□□ -2.09
TRAV40A0A0B4J280 MIR325-201ENST00000385260 98 ntBASIC2□□□□□ -2.09
TRAV40A0A0B4J280 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2□□□□□ -2.09
TRAV40A0A0B4J280 AL359511.1-201ENST00000402970 211 ntBASIC2□□□□□ -2.09
TRAV40A0A0B4J280 AL139095.1-201ENST00000404326 391 ntBASIC2□□□□□ -2.09
TRAV40A0A0B4J280 AL021407.1-201ENST00000404531 386 ntBASIC2□□□□□ -2.09
TRAV40A0A0B4J280 RPS4XP7-201ENST00000406274 780 ntBASIC2□□□□□ -2.09
TRAV40A0A0B4J280 MIR1305-201ENST00000408300 86 ntBASIC2□□□□□ -2.09
TRAV40A0A0B4J280 RNU4-53P-201ENST00000410828 140 ntBASIC2□□□□□ -2.09
TRAV40A0A0B4J280 RN7SKP284-201ENST00000411002 343 ntBASIC2□□□□□ -2.09
TRAV40A0A0B4J280 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC2□□□□□ -2.09
TRAV40A0A0B4J280 UBE2FP1-201ENST00000416536 447 ntBASIC2□□□□□ -2.09
TRAV40A0A0B4J280 USP9YP13-201ENST00000417797 480 ntBASIC2□□□□□ -2.09
TRAV40A0A0B4J280 MTND2P18-201ENST00000419962 1030 ntBASIC2□□□□□ -2.09
TRAV40A0A0B4J280 AC118469.1-201ENST00000442943 488 ntBASIC2□□□□□ -2.09
TRAV40A0A0B4J280 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2□□□□□ -2.09
TRAV40A0A0B4J280 HIGD1AP2-201ENST00000446367 280 ntBASIC2□□□□□ -2.09
TRAV40A0A0B4J280 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2□□□□□ -2.09
TRAV40A0A0B4J280 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2□□□□□ -2.09
TRAV40A0A0B4J280 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2□□□□□ -2.09
TRAV40A0A0B4J280 AC012181.1-201ENST00000479895 423 ntBASIC2□□□□□ -2.09
TRAV40A0A0B4J280 BET1P1-201ENST00000482276 359 ntBASIC2□□□□□ -2.09
TRAV40A0A0B4J280 LARP1BP2-201ENST00000486594 519 ntBASIC2□□□□□ -2.09
TRAV40A0A0B4J280 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2□□□□□ -2.09
TRAV40A0A0B4J280 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2□□□□□ -2.09
TRAV40A0A0B4J280 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2□□□□□ -2.09
TRAV40A0A0B4J280 AC022483.1-201ENST00000514020 567 ntBASIC2□□□□□ -2.09
TRAV40A0A0B4J280 HMGB1P41-201ENST00000520234 440 ntBASIC2□□□□□ -2.09
TRAV40A0A0B4J280 AP003122.3-201ENST00000526316 255 ntBASIC2□□□□□ -2.09
TRAV40A0A0B4J280 AC022690.1-201ENST00000526681 550 ntBASIC2□□□□□ -2.09
TRAV40A0A0B4J280 AP002748.2-201ENST00000528671 348 ntBASIC2□□□□□ -2.09
TRAV40A0A0B4J280 AC021269.2-201ENST00000532318 330 ntBASIC2□□□□□ -2.09
TRAV40A0A0B4J280 AC007834.2-201ENST00000536310 343 ntBASIC2□□□□□ -2.09
TRAV40A0A0B4J280 AC123904.3-201ENST00000547218 814 ntBASIC2□□□□□ -2.09
TRAV40A0A0B4J280 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2□□□□□ -2.09
TRAV40A0A0B4J280 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC2□□□□□ -2.09
TRAV40A0A0B4J280 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2□□□□□ -2.09
TRAV40A0A0B4J280 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2□□□□□ -2.09
TRAV40A0A0B4J280 AL133153.1-201ENST00000557756 303 ntBASIC2□□□□□ -2.09
TRAV40A0A0B4J280 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC2□□□□□ -2.09
TRAV40A0A0B4J280 AC091489.2-201ENST00000566263 604 ntBASIC2□□□□□ -2.09
TRAV40A0A0B4J280 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2□□□□□ -2.09
TRAV40A0A0B4J280 AC012414.6-201ENST00000568241 401 ntBASIC2□□□□□ -2.09
TRAV40A0A0B4J280 MIR5697-201ENST00000578045 78 ntBASIC2□□□□□ -2.09
TRAV40A0A0B4J280 MIR3945-201ENST00000581853 98 ntBASIC2□□□□□ -2.09
TRAV40A0A0B4J280 NIFKP6-201ENST00000598115 845 ntBASIC2□□□□□ -2.09
TRAV40A0A0B4J280 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms