Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHAC2Q9Y5I4 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHAC2Q9Y5I4 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHAC2Q9Y5I4 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHAC2Q9Y5I4 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHAC2Q9Y5I4 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHAC2Q9Y5I4 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC22.68■■□□□ 1.22
PCDHAC2Q9Y5I4 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHAC2Q9Y5I4 SEC1P-202ENST00000473944 940 ntBASIC22.68■■□□□ 1.22
PCDHAC2Q9Y5I4 UNC93B7-201ENST00000509439 705 ntBASIC22.68■■□□□ 1.22
PCDHAC2Q9Y5I4 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHAC2Q9Y5I4 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC22.68■■□□□ 1.22
PCDHAC2Q9Y5I4 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHAC2Q9Y5I4 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHAC2Q9Y5I4 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC22.68■■□□□ 1.22
PCDHAC2Q9Y5I4 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHAC2Q9Y5I4 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC22.68■■□□□ 1.22
PCDHAC2Q9Y5I4 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
PCDHAC2Q9Y5I4 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC22.68■■□□□ 1.22
PCDHAC2Q9Y5I4 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHAC2Q9Y5I4 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHAC2Q9Y5I4 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
PCDHAC2Q9Y5I4 PWWP2AP1-201ENST00000429776 2273 ntBASIC22.68■■□□□ 1.22
PCDHAC2Q9Y5I4 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC22.68■■□□□ 1.22
PCDHAC2Q9Y5I4 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHAC2Q9Y5I4 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PCDHAC2Q9Y5I4 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
PCDHAC2Q9Y5I4 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
PCDHAC2Q9Y5I4 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
PCDHAC2Q9Y5I4 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
PCDHAC2Q9Y5I4 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC22.67■■□□□ 1.22
PCDHAC2Q9Y5I4 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC22.67■■□□□ 1.22
PCDHAC2Q9Y5I4 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC22.67■■□□□ 1.22
PCDHAC2Q9Y5I4 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC22.67■■□□□ 1.22
PCDHAC2Q9Y5I4 AC011498.5-201ENST00000592027 486 ntBASIC22.67■■□□□ 1.22
PCDHAC2Q9Y5I4 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC22.67■■□□□ 1.22
PCDHAC2Q9Y5I4 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
PCDHAC2Q9Y5I4 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PCDHAC2Q9Y5I4 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC22.67■■□□□ 1.22
PCDHAC2Q9Y5I4 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PCDHAC2Q9Y5I4 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PCDHAC2Q9Y5I4 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
PCDHAC2Q9Y5I4 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC22.67■■□□□ 1.22
PCDHAC2Q9Y5I4 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PCDHAC2Q9Y5I4 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC22.67■■□□□ 1.22
PCDHAC2Q9Y5I4 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC22.67■■□□□ 1.22
PCDHAC2Q9Y5I4 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PCDHAC2Q9Y5I4 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
PCDHAC2Q9Y5I4 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC22.66■■□□□ 1.22
PCDHAC2Q9Y5I4 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC22.66■■□□□ 1.22
PCDHAC2Q9Y5I4 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
PCDHAC2Q9Y5I4 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
PCDHAC2Q9Y5I4 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
PCDHAC2Q9Y5I4 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC22.66■■□□□ 1.22
PCDHAC2Q9Y5I4 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHAC2Q9Y5I4 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC22.66■■□□□ 1.22
PCDHAC2Q9Y5I4 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC22.66■■□□□ 1.22
PCDHAC2Q9Y5I4 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC22.66■■□□□ 1.22
PCDHAC2Q9Y5I4 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHAC2Q9Y5I4 AC092329.2-201ENST00000598402 547 ntBASIC22.66■■□□□ 1.22
PCDHAC2Q9Y5I4 AL157888.1-201ENST00000631930 593 ntBASIC22.66■■□□□ 1.22
PCDHAC2Q9Y5I4 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHAC2Q9Y5I4 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
PCDHAC2Q9Y5I4 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
PCDHAC2Q9Y5I4 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHAC2Q9Y5I4 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHAC2Q9Y5I4 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHAC2Q9Y5I4 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
PCDHAC2Q9Y5I4 TSSC2-201ENST00000450217 709 ntBASIC22.65■■□□□ 1.22
PCDHAC2Q9Y5I4 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC22.65■■□□□ 1.22
PCDHAC2Q9Y5I4 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC22.65■■□□□ 1.22
PCDHAC2Q9Y5I4 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
PCDHAC2Q9Y5I4 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
PCDHAC2Q9Y5I4 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC22.65■■□□□ 1.22
PCDHAC2Q9Y5I4 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC22.65■■□□□ 1.22
PCDHAC2Q9Y5I4 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
PCDHAC2Q9Y5I4 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHAC2Q9Y5I4 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHAC2Q9Y5I4 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
PCDHAC2Q9Y5I4 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC22.64■■□□□ 1.22
PCDHAC2Q9Y5I4 PCDHAC2-203ENST00000615316 3011 ntBASIC22.64■■□□□ 1.22
PCDHAC2Q9Y5I4 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PCDHAC2Q9Y5I4 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PCDHAC2Q9Y5I4 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PCDHAC2Q9Y5I4 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PCDHAC2Q9Y5I4 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
PCDHAC2Q9Y5I4 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
PCDHAC2Q9Y5I4 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
PCDHAC2Q9Y5I4 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC22.64■■□□□ 1.21
PCDHAC2Q9Y5I4 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC22.64■■□□□ 1.21
PCDHAC2Q9Y5I4 PRR29-207ENST00000580752 458 ntTSL 3 BASIC22.64■■□□□ 1.21
PCDHAC2Q9Y5I4 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC22.64■■□□□ 1.21
PCDHAC2Q9Y5I4 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
PCDHAC2Q9Y5I4 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PCDHAC2Q9Y5I4 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PCDHAC2Q9Y5I4 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PCDHAC2Q9Y5I4 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
PCDHAC2Q9Y5I4 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC22.64■■□□□ 1.21
PCDHAC2Q9Y5I4 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
PCDHAC2Q9Y5I4 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms