Protein–RNA interactions for Protein: Q9Y223

GNE, Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase, humanhuman

Known RBP Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GNEQ9Y223 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
GNEQ9Y223 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
GNEQ9Y223 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC21.24■□□□□ 0.99
GNEQ9Y223 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
GNEQ9Y223 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
GNEQ9Y223 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC21.24■□□□□ 0.99
GNEQ9Y223 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC21.24■□□□□ 0.99
GNEQ9Y223 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC21.24■□□□□ 0.99
GNEQ9Y223 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC21.24■□□□□ 0.99
GNEQ9Y223 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC21.24■□□□□ 0.99
GNEQ9Y223 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
GNEQ9Y223 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC21.24■□□□□ 0.99
GNEQ9Y223 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
GNEQ9Y223 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
GNEQ9Y223 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
GNEQ9Y223 LBX2-AS1-202ENST00000603175 2083 ntBASIC21.24■□□□□ 0.99
GNEQ9Y223 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
GNEQ9Y223 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
GNEQ9Y223 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
GNEQ9Y223 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
GNEQ9Y223 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
GNEQ9Y223 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
GNEQ9Y223 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
GNEQ9Y223 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
GNEQ9Y223 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
GNEQ9Y223 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
GNEQ9Y223 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
GNEQ9Y223 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC21.23■□□□□ 0.99
GNEQ9Y223 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC21.23■□□□□ 0.99
GNEQ9Y223 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
GNEQ9Y223 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
GNEQ9Y223 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
GNEQ9Y223 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC21.23■□□□□ 0.99
GNEQ9Y223 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC21.23■□□□□ 0.99
GNEQ9Y223 AC092119.3-201ENST00000612618 583 ntBASIC21.23■□□□□ 0.99
GNEQ9Y223 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
GNEQ9Y223 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
GNEQ9Y223 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
GNEQ9Y223 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
GNEQ9Y223 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
GNEQ9Y223 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
GNEQ9Y223 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
GNEQ9Y223 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC21.23■□□□□ 0.99
GNEQ9Y223 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC21.23■□□□□ 0.99
GNEQ9Y223 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC21.23■□□□□ 0.99
GNEQ9Y223 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC21.23■□□□□ 0.99
GNEQ9Y223 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC21.23■□□□□ 0.99
GNEQ9Y223 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21.23■□□□□ 0.99
GNEQ9Y223 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
GNEQ9Y223 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
GNEQ9Y223 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
GNEQ9Y223 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
GNEQ9Y223 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
GNEQ9Y223 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
GNEQ9Y223 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC21.22■□□□□ 0.99
GNEQ9Y223 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC21.22■□□□□ 0.99
GNEQ9Y223 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC21.22■□□□□ 0.99
GNEQ9Y223 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC21.22■□□□□ 0.99
GNEQ9Y223 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC21.22■□□□□ 0.99
GNEQ9Y223 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
GNEQ9Y223 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
GNEQ9Y223 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
GNEQ9Y223 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
GNEQ9Y223 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
GNEQ9Y223 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
GNEQ9Y223 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
GNEQ9Y223 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC21.22■□□□□ 0.99
GNEQ9Y223 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
GNEQ9Y223 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC21.21■□□□□ 0.99
GNEQ9Y223 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC21.21■□□□□ 0.99
GNEQ9Y223 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.21■□□□□ 0.99
GNEQ9Y223 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
GNEQ9Y223 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
GNEQ9Y223 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
GNEQ9Y223 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
GNEQ9Y223 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
GNEQ9Y223 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
GNEQ9Y223 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC21.21■□□□□ 0.99
GNEQ9Y223 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC21.21■□□□□ 0.99
GNEQ9Y223 SEC1P-202ENST00000473944 940 ntBASIC21.21■□□□□ 0.99
GNEQ9Y223 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC21.21■□□□□ 0.99
GNEQ9Y223 MIR3180-5-201ENST00000583743 153 ntBASIC21.21■□□□□ 0.99
GNEQ9Y223 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC21.21■□□□□ 0.99
GNEQ9Y223 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC21.21■□□□□ 0.99
GNEQ9Y223 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
GNEQ9Y223 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC21.21■□□□□ 0.99
GNEQ9Y223 VPS72-207ENST00000640458 689 ntTSL 5 BASIC21.21■□□□□ 0.99
GNEQ9Y223 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
GNEQ9Y223 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
GNEQ9Y223 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
GNEQ9Y223 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
GNEQ9Y223 KRT8P3-201ENST00000519669 1449 ntBASIC21.21■□□□□ 0.99
GNEQ9Y223 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC21.2■□□□□ 0.98
GNEQ9Y223 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC21.2■□□□□ 0.98
GNEQ9Y223 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
GNEQ9Y223 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
GNEQ9Y223 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
GNEQ9Y223 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
GNEQ9Y223 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
GNEQ9Y223 MCCD1P1-208ENST00000445732 328 ntBASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms