Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
COL17A1Q9UMD9 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
COL17A1Q9UMD9 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC28.92■■■□□ 2.22
COL17A1Q9UMD9 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC28.92■■■□□ 2.22
COL17A1Q9UMD9 AC090616.6-201ENST00000582640 721 ntBASIC28.92■■■□□ 2.22
COL17A1Q9UMD9 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
COL17A1Q9UMD9 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC28.92■■■□□ 2.22
COL17A1Q9UMD9 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
COL17A1Q9UMD9 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
COL17A1Q9UMD9 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC28.92■■■□□ 2.22
COL17A1Q9UMD9 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC28.92■■■□□ 2.22
COL17A1Q9UMD9 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
COL17A1Q9UMD9 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
COL17A1Q9UMD9 NSUN5P1-202ENST00000421140 1535 ntBASIC28.92■■■□□ 2.22
COL17A1Q9UMD9 NSUN5P2-203ENST00000457352 1529 ntBASIC28.92■■■□□ 2.22
COL17A1Q9UMD9 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
COL17A1Q9UMD9 RPSAP43-201ENST00000402237 625 ntBASIC28.91■■■□□ 2.22
COL17A1Q9UMD9 UPF3AP3-201ENST00000420996 769 ntBASIC28.91■■■□□ 2.22
COL17A1Q9UMD9 CDV3-207ENST00000508481 661 ntTSL 3 BASIC28.91■■■□□ 2.22
COL17A1Q9UMD9 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC28.91■■■□□ 2.22
COL17A1Q9UMD9 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC28.91■■■□□ 2.22
COL17A1Q9UMD9 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC28.91■■■□□ 2.22
COL17A1Q9UMD9 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
COL17A1Q9UMD9 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
COL17A1Q9UMD9 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
COL17A1Q9UMD9 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
COL17A1Q9UMD9 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
COL17A1Q9UMD9 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC28.91■■■□□ 2.22
COL17A1Q9UMD9 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC28.91■■■□□ 2.22
COL17A1Q9UMD9 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
COL17A1Q9UMD9 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
COL17A1Q9UMD9 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC28.91■■■□□ 2.22
COL17A1Q9UMD9 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
COL17A1Q9UMD9 NUS1P2-201ENST00000417358 873 ntBASIC28.91■■■□□ 2.22
COL17A1Q9UMD9 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC28.91■■■□□ 2.22
COL17A1Q9UMD9 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC28.91■■■□□ 2.22
COL17A1Q9UMD9 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC28.91■■■□□ 2.22
COL17A1Q9UMD9 LITAF-211ENST00000572255 516 ntTSL 4 BASIC28.91■■■□□ 2.22
COL17A1Q9UMD9 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC28.91■■■□□ 2.22
COL17A1Q9UMD9 AC010327.4-202ENST00000591484 748 ntBASIC28.91■■■□□ 2.22
COL17A1Q9UMD9 Z69720.1-201ENST00000601483 472 ntBASIC28.91■■■□□ 2.22
COL17A1Q9UMD9 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC28.91■■■□□ 2.22
COL17A1Q9UMD9 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC28.91■■■□□ 2.22
COL17A1Q9UMD9 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
COL17A1Q9UMD9 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
COL17A1Q9UMD9 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
COL17A1Q9UMD9 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC28.9■■■□□ 2.22
COL17A1Q9UMD9 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
COL17A1Q9UMD9 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
COL17A1Q9UMD9 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
COL17A1Q9UMD9 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC28.9■■■□□ 2.22
COL17A1Q9UMD9 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC28.9■■■□□ 2.22
COL17A1Q9UMD9 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC28.9■■■□□ 2.22
COL17A1Q9UMD9 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC28.9■■■□□ 2.22
COL17A1Q9UMD9 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC28.9■■■□□ 2.22
COL17A1Q9UMD9 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC28.9■■■□□ 2.22
COL17A1Q9UMD9 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
COL17A1Q9UMD9 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC28.89■■■□□ 2.22
COL17A1Q9UMD9 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC28.89■■■□□ 2.22
COL17A1Q9UMD9 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
COL17A1Q9UMD9 FEM1AP4-201ENST00000443167 1987 ntBASIC28.89■■■□□ 2.22
COL17A1Q9UMD9 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
COL17A1Q9UMD9 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC28.89■■■□□ 2.22
COL17A1Q9UMD9 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC28.89■■■□□ 2.22
COL17A1Q9UMD9 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
COL17A1Q9UMD9 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC28.89■■■□□ 2.22
COL17A1Q9UMD9 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC28.89■■■□□ 2.22
COL17A1Q9UMD9 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC28.89■■■□□ 2.22
COL17A1Q9UMD9 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC28.89■■■□□ 2.22
COL17A1Q9UMD9 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC28.89■■■□□ 2.22
COL17A1Q9UMD9 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC28.89■■■□□ 2.22
COL17A1Q9UMD9 AC112497.1-201ENST00000624824 639 ntBASIC28.89■■■□□ 2.22
COL17A1Q9UMD9 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC28.89■■■□□ 2.22
COL17A1Q9UMD9 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC28.89■■■□□ 2.22
COL17A1Q9UMD9 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
COL17A1Q9UMD9 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC28.88■■■□□ 2.21
COL17A1Q9UMD9 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
COL17A1Q9UMD9 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
COL17A1Q9UMD9 GPX1P2-201ENST00000429271 606 ntBASIC28.88■■■□□ 2.21
COL17A1Q9UMD9 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC28.88■■■□□ 2.21
COL17A1Q9UMD9 AC139887.3-201ENST00000568585 713 ntBASIC28.88■■■□□ 2.21
COL17A1Q9UMD9 MIR3197-201ENST00000582241 73 ntBASIC28.88■■■□□ 2.21
COL17A1Q9UMD9 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC28.88■■■□□ 2.21
COL17A1Q9UMD9 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC28.88■■■□□ 2.21
COL17A1Q9UMD9 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
COL17A1Q9UMD9 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC28.88■■■□□ 2.21
COL17A1Q9UMD9 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC28.88■■■□□ 2.21
COL17A1Q9UMD9 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC28.88■■■□□ 2.21
COL17A1Q9UMD9 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
COL17A1Q9UMD9 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
COL17A1Q9UMD9 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC28.88■■■□□ 2.21
COL17A1Q9UMD9 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
COL17A1Q9UMD9 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC28.87■■■□□ 2.21
COL17A1Q9UMD9 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC28.87■■■□□ 2.21
COL17A1Q9UMD9 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC28.87■■■□□ 2.21
COL17A1Q9UMD9 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
COL17A1Q9UMD9 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC28.87■■■□□ 2.21
COL17A1Q9UMD9 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC28.87■■■□□ 2.21
COL17A1Q9UMD9 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
COL17A1Q9UMD9 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC28.87■■■□□ 2.21
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms