Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC23.19■■□□□ 1.3
RTFDC1Q9BY42 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RTFDC1Q9BY42 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC23.19■■□□□ 1.3
RTFDC1Q9BY42 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RTFDC1Q9BY42 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
RTFDC1Q9BY42 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RTFDC1Q9BY42 PVRIG2P-201ENST00000435460 978 ntBASIC23.19■■□□□ 1.3
RTFDC1Q9BY42 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RTFDC1Q9BY42 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RTFDC1Q9BY42 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RTFDC1Q9BY42 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RTFDC1Q9BY42 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC23.19■■□□□ 1.3
RTFDC1Q9BY42 MPI-205ENST00000562606 1052 ntTSL 3 BASIC23.19■■□□□ 1.3
RTFDC1Q9BY42 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC23.19■■□□□ 1.3
RTFDC1Q9BY42 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
RTFDC1Q9BY42 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
RTFDC1Q9BY42 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RTFDC1Q9BY42 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RTFDC1Q9BY42 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC23.19■■□□□ 1.3
RTFDC1Q9BY42 CLDN5-201ENST00000403084 2357 ntBASIC23.19■■□□□ 1.3
RTFDC1Q9BY42 AC036111.1-201ENST00000533973 1582 ntBASIC23.18■■□□□ 1.3
RTFDC1Q9BY42 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
RTFDC1Q9BY42 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RTFDC1Q9BY42 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RTFDC1Q9BY42 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RTFDC1Q9BY42 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
RTFDC1Q9BY42 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RTFDC1Q9BY42 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC23.18■■□□□ 1.3
RTFDC1Q9BY42 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC23.18■■□□□ 1.3
RTFDC1Q9BY42 AP002414.4-201ENST00000589764 1148 ntBASIC23.18■■□□□ 1.3
RTFDC1Q9BY42 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
RTFDC1Q9BY42 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC23.18■■□□□ 1.3
RTFDC1Q9BY42 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
RTFDC1Q9BY42 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC23.18■■□□□ 1.3
RTFDC1Q9BY42 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RTFDC1Q9BY42 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
RTFDC1Q9BY42 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
RTFDC1Q9BY42 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RTFDC1Q9BY42 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RTFDC1Q9BY42 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC23.18■■□□□ 1.3
RTFDC1Q9BY42 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
RTFDC1Q9BY42 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC23.17■■□□□ 1.3
RTFDC1Q9BY42 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
RTFDC1Q9BY42 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RTFDC1Q9BY42 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC23.17■■□□□ 1.3
RTFDC1Q9BY42 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
RTFDC1Q9BY42 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC23.17■■□□□ 1.3
RTFDC1Q9BY42 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
RTFDC1Q9BY42 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RTFDC1Q9BY42 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RTFDC1Q9BY42 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
RTFDC1Q9BY42 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RTFDC1Q9BY42 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RTFDC1Q9BY42 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
RTFDC1Q9BY42 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
RTFDC1Q9BY42 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC23.16■■□□□ 1.3
RTFDC1Q9BY42 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC23.16■■□□□ 1.3
RTFDC1Q9BY42 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC23.16■■□□□ 1.3
RTFDC1Q9BY42 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
RTFDC1Q9BY42 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RTFDC1Q9BY42 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
RTFDC1Q9BY42 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RTFDC1Q9BY42 MIR662-201ENST00000384847 95 ntBASIC23.16■■□□□ 1.3
RTFDC1Q9BY42 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC23.16■■□□□ 1.3
RTFDC1Q9BY42 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC23.16■■□□□ 1.3
RTFDC1Q9BY42 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC23.16■■□□□ 1.3
RTFDC1Q9BY42 MIR3180-5-201ENST00000583743 153 ntBASIC23.16■■□□□ 1.3
RTFDC1Q9BY42 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC23.16■■□□□ 1.3
RTFDC1Q9BY42 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC23.16■■□□□ 1.3
RTFDC1Q9BY42 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RTFDC1Q9BY42 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC23.16■■□□□ 1.3
RTFDC1Q9BY42 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
RTFDC1Q9BY42 KRT8P10-201ENST00000450021 1447 ntBASIC23.16■■□□□ 1.3
RTFDC1Q9BY42 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RTFDC1Q9BY42 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC23.16■■□□□ 1.3
RTFDC1Q9BY42 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC23.16■■□□□ 1.3
RTFDC1Q9BY42 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RTFDC1Q9BY42 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
RTFDC1Q9BY42 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RTFDC1Q9BY42 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
RTFDC1Q9BY42 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
RTFDC1Q9BY42 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RTFDC1Q9BY42 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RTFDC1Q9BY42 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
RTFDC1Q9BY42 CHCHD2P8-201ENST00000429873 447 ntBASIC23.15■■□□□ 1.3
RTFDC1Q9BY42 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC23.15■■□□□ 1.3
RTFDC1Q9BY42 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC23.15■■□□□ 1.3
RTFDC1Q9BY42 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
RTFDC1Q9BY42 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC23.15■■□□□ 1.3
RTFDC1Q9BY42 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC23.15■■□□□ 1.3
RTFDC1Q9BY42 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
RTFDC1Q9BY42 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
RTFDC1Q9BY42 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC23.14■■□□□ 1.3
RTFDC1Q9BY42 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.3
RTFDC1Q9BY42 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
RTFDC1Q9BY42 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
RTFDC1Q9BY42 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
RTFDC1Q9BY42 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
RTFDC1Q9BY42 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
RTFDC1Q9BY42 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms