Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NOTCH4Q99466 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
NOTCH4Q99466 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.67■□□□□ 0.74
NOTCH4Q99466 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
NOTCH4Q99466 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NOTCH4Q99466 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NOTCH4Q99466 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.67■□□□□ 0.74
NOTCH4Q99466 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.67■□□□□ 0.74
NOTCH4Q99466 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
NOTCH4Q99466 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NOTCH4Q99466 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.67■□□□□ 0.74
NOTCH4Q99466 MIR3180-5-201ENST00000583743 153 ntBASIC19.67■□□□□ 0.74
NOTCH4Q99466 IFNL4P1-201ENST00000607083 540 ntBASIC19.67■□□□□ 0.74
NOTCH4Q99466 IRF5-214ENST00000613821 595 ntTSL 5 BASIC19.67■□□□□ 0.74
NOTCH4Q99466 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NOTCH4Q99466 AC079602.3-201ENST00000623931 403 ntBASIC19.67■□□□□ 0.74
NOTCH4Q99466 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NOTCH4Q99466 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NOTCH4Q99466 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.67■□□□□ 0.74
NOTCH4Q99466 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
NOTCH4Q99466 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NOTCH4Q99466 AC125437.2-201ENST00000625180 2167 ntBASIC19.67■□□□□ 0.74
NOTCH4Q99466 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NOTCH4Q99466 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.66■□□□□ 0.74
NOTCH4Q99466 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.66■□□□□ 0.74
NOTCH4Q99466 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.66■□□□□ 0.74
NOTCH4Q99466 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC19.66■□□□□ 0.74
NOTCH4Q99466 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.66■□□□□ 0.74
NOTCH4Q99466 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NOTCH4Q99466 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NOTCH4Q99466 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.66■□□□□ 0.74
NOTCH4Q99466 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.66■□□□□ 0.74
NOTCH4Q99466 KRT8P10-201ENST00000450021 1447 ntBASIC19.66■□□□□ 0.74
NOTCH4Q99466 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.66■□□□□ 0.74
NOTCH4Q99466 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.66■□□□□ 0.74
NOTCH4Q99466 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.66■□□□□ 0.74
NOTCH4Q99466 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.66■□□□□ 0.74
NOTCH4Q99466 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.66■□□□□ 0.74
NOTCH4Q99466 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NOTCH4Q99466 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.66■□□□□ 0.74
NOTCH4Q99466 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.66■□□□□ 0.74
NOTCH4Q99466 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NOTCH4Q99466 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.66■□□□□ 0.74
NOTCH4Q99466 SKP2-204ENST00000508514 821 ntTSL 3 BASIC19.66■□□□□ 0.74
NOTCH4Q99466 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC19.66■□□□□ 0.74
NOTCH4Q99466 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC19.66■□□□□ 0.74
NOTCH4Q99466 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.66■□□□□ 0.74
NOTCH4Q99466 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NOTCH4Q99466 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.66■□□□□ 0.74
NOTCH4Q99466 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NOTCH4Q99466 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
NOTCH4Q99466 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.65■□□□□ 0.74
NOTCH4Q99466 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.65■□□□□ 0.74
NOTCH4Q99466 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.65■□□□□ 0.74
NOTCH4Q99466 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
NOTCH4Q99466 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NOTCH4Q99466 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
NOTCH4Q99466 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.65■□□□□ 0.74
NOTCH4Q99466 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NOTCH4Q99466 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.65■□□□□ 0.74
NOTCH4Q99466 AC024243.1-201ENST00000609234 778 ntBASIC19.65■□□□□ 0.74
NOTCH4Q99466 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC19.65■□□□□ 0.74
NOTCH4Q99466 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.65■□□□□ 0.74
NOTCH4Q99466 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
NOTCH4Q99466 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
NOTCH4Q99466 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NOTCH4Q99466 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.65■□□□□ 0.74
NOTCH4Q99466 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NOTCH4Q99466 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
NOTCH4Q99466 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.74
NOTCH4Q99466 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
NOTCH4Q99466 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.64■□□□□ 0.74
NOTCH4Q99466 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC19.64■□□□□ 0.74
NOTCH4Q99466 RN7SL510P-201ENST00000581311 263 ntBASIC19.64■□□□□ 0.74
NOTCH4Q99466 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC19.64■□□□□ 0.74
NOTCH4Q99466 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
NOTCH4Q99466 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.74
NOTCH4Q99466 AL391807.1-203ENST00000604392 2365 ntBASIC19.64■□□□□ 0.73
NOTCH4Q99466 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.64■□□□□ 0.73
NOTCH4Q99466 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NOTCH4Q99466 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.64■□□□□ 0.73
NOTCH4Q99466 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
NOTCH4Q99466 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NOTCH4Q99466 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.64■□□□□ 0.73
NOTCH4Q99466 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC19.64■□□□□ 0.73
NOTCH4Q99466 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.64■□□□□ 0.73
NOTCH4Q99466 KRT8P3-201ENST00000519669 1449 ntBASIC19.64■□□□□ 0.73
NOTCH4Q99466 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NOTCH4Q99466 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
NOTCH4Q99466 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
NOTCH4Q99466 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19.64■□□□□ 0.73
NOTCH4Q99466 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NOTCH4Q99466 AC026396.1-201ENST00000419388 421 ntBASIC19.64■□□□□ 0.73
NOTCH4Q99466 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC19.64■□□□□ 0.73
NOTCH4Q99466 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NOTCH4Q99466 TPSP2-201ENST00000561760 610 ntBASIC19.64■□□□□ 0.73
NOTCH4Q99466 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.64■□□□□ 0.73
NOTCH4Q99466 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
NOTCH4Q99466 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NOTCH4Q99466 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms