Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.24■□□□□ 0.19
CSMD1Q96PZ7 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CSMD1Q96PZ7 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
CSMD1Q96PZ7 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
CSMD1Q96PZ7 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC16.24■□□□□ 0.19
CSMD1Q96PZ7 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CSMD1Q96PZ7 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CSMD1Q96PZ7 TUB-203ENST00000534099 1759 ntTSL 2 BASIC16.24■□□□□ 0.19
CSMD1Q96PZ7 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CSMD1Q96PZ7 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.24■□□□□ 0.19
CSMD1Q96PZ7 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.24■□□□□ 0.19
CSMD1Q96PZ7 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CSMD1Q96PZ7 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.24■□□□□ 0.19
CSMD1Q96PZ7 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.24■□□□□ 0.19
CSMD1Q96PZ7 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.24■□□□□ 0.19
CSMD1Q96PZ7 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CSMD1Q96PZ7 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CSMD1Q96PZ7 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC16.24■□□□□ 0.19
CSMD1Q96PZ7 PMS2P7-201ENST00000506558 1336 ntBASIC16.24■□□□□ 0.19
CSMD1Q96PZ7 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CSMD1Q96PZ7 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CSMD1Q96PZ7 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CSMD1Q96PZ7 GPX1P2-201ENST00000429271 606 ntBASIC16.23■□□□□ 0.19
CSMD1Q96PZ7 LINC00265-3P-201ENST00000447588 903 ntBASIC16.23■□□□□ 0.19
CSMD1Q96PZ7 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.23■□□□□ 0.19
CSMD1Q96PZ7 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.23■□□□□ 0.19
CSMD1Q96PZ7 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC16.23■□□□□ 0.19
CSMD1Q96PZ7 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CSMD1Q96PZ7 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CSMD1Q96PZ7 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CSMD1Q96PZ7 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
CSMD1Q96PZ7 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CSMD1Q96PZ7 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CSMD1Q96PZ7 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CSMD1Q96PZ7 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CSMD1Q96PZ7 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.23■□□□□ 0.19
CSMD1Q96PZ7 AC106730.1-201ENST00000566722 1090 ntBASIC16.23■□□□□ 0.19
CSMD1Q96PZ7 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CSMD1Q96PZ7 AC138894.3-201ENST00000603787 634 ntBASIC16.23■□□□□ 0.19
CSMD1Q96PZ7 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.23■□□□□ 0.19
CSMD1Q96PZ7 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.23■□□□□ 0.19
CSMD1Q96PZ7 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CSMD1Q96PZ7 FP700111.2-201ENST00000619190 1892 ntBASIC16.23■□□□□ 0.19
CSMD1Q96PZ7 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC16.23■□□□□ 0.19
CSMD1Q96PZ7 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CSMD1Q96PZ7 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CSMD1Q96PZ7 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CSMD1Q96PZ7 RPSAP43-201ENST00000402237 625 ntBASIC16.23■□□□□ 0.19
CSMD1Q96PZ7 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.23■□□□□ 0.19
CSMD1Q96PZ7 DERL1-203ENST00000419562 918 ntTSL 2 BASIC16.23■□□□□ 0.19
CSMD1Q96PZ7 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CSMD1Q96PZ7 AL121772.3-201ENST00000610840 674 ntBASIC16.23■□□□□ 0.19
CSMD1Q96PZ7 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CSMD1Q96PZ7 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.23■□□□□ 0.19
CSMD1Q96PZ7 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
CSMD1Q96PZ7 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC16.23■□□□□ 0.19
CSMD1Q96PZ7 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC16.23■□□□□ 0.19
CSMD1Q96PZ7 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.23■□□□□ 0.19
CSMD1Q96PZ7 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CSMD1Q96PZ7 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC16.23■□□□□ 0.19
CSMD1Q96PZ7 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CSMD1Q96PZ7 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CSMD1Q96PZ7 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CSMD1Q96PZ7 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CSMD1Q96PZ7 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CSMD1Q96PZ7 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CSMD1Q96PZ7 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CSMD1Q96PZ7 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.22■□□□□ 0.19
CSMD1Q96PZ7 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.22■□□□□ 0.19
CSMD1Q96PZ7 AC064862.7-201ENST00000604520 867 ntBASIC16.22■□□□□ 0.19
CSMD1Q96PZ7 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CSMD1Q96PZ7 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CSMD1Q96PZ7 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CSMD1Q96PZ7 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC16.22■□□□□ 0.19
CSMD1Q96PZ7 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CSMD1Q96PZ7 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CSMD1Q96PZ7 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.22■□□□□ 0.19
CSMD1Q96PZ7 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CSMD1Q96PZ7 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC16.22■□□□□ 0.19
CSMD1Q96PZ7 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CSMD1Q96PZ7 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CSMD1Q96PZ7 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.22■□□□□ 0.19
CSMD1Q96PZ7 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.22■□□□□ 0.19
CSMD1Q96PZ7 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CSMD1Q96PZ7 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CSMD1Q96PZ7 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC16.22■□□□□ 0.19
CSMD1Q96PZ7 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC16.21■□□□□ 0.19
CSMD1Q96PZ7 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CSMD1Q96PZ7 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CSMD1Q96PZ7 MIR662-201ENST00000384847 95 ntBASIC16.21■□□□□ 0.19
CSMD1Q96PZ7 AL031284.1-201ENST00000419297 478 ntBASIC16.21■□□□□ 0.19
CSMD1Q96PZ7 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CSMD1Q96PZ7 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.21■□□□□ 0.19
CSMD1Q96PZ7 AL691403.2-201ENST00000618460 490 ntBASIC16.21■□□□□ 0.19
CSMD1Q96PZ7 MIR2861-201ENST00000636310 90 ntBASIC16.21■□□□□ 0.19
CSMD1Q96PZ7 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CSMD1Q96PZ7 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC16.21■□□□□ 0.19
CSMD1Q96PZ7 AC073314.1-201ENST00000568729 2216 ntBASIC16.21■□□□□ 0.19
CSMD1Q96PZ7 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC16.21■□□□□ 0.19
CSMD1Q96PZ7 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms