Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.23■□□□□ 0.51
CNTNAP3BQ96NU0 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CNTNAP3BQ96NU0 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CNTNAP3BQ96NU0 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CNTNAP3BQ96NU0 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
CNTNAP3BQ96NU0 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CNTNAP3BQ96NU0 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CNTNAP3BQ96NU0 AC080038.3-201ENST00000623346 1952 ntBASIC18.22■□□□□ 0.51
CNTNAP3BQ96NU0 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CNTNAP3BQ96NU0 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CNTNAP3BQ96NU0 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CNTNAP3BQ96NU0 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.22■□□□□ 0.51
CNTNAP3BQ96NU0 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CNTNAP3BQ96NU0 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
CNTNAP3BQ96NU0 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CNTNAP3BQ96NU0 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CNTNAP3BQ96NU0 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
CNTNAP3BQ96NU0 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CNTNAP3BQ96NU0 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CNTNAP3BQ96NU0 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
CNTNAP3BQ96NU0 FAM197Y8-203ENST00000450145 560 ntBASIC18.22■□□□□ 0.51
CNTNAP3BQ96NU0 COX20P2-201ENST00000452636 358 ntBASIC18.22■□□□□ 0.51
CNTNAP3BQ96NU0 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.22■□□□□ 0.51
CNTNAP3BQ96NU0 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC18.22■□□□□ 0.51
CNTNAP3BQ96NU0 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
CNTNAP3BQ96NU0 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC18.22■□□□□ 0.51
CNTNAP3BQ96NU0 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.22■□□□□ 0.51
CNTNAP3BQ96NU0 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CNTNAP3BQ96NU0 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CNTNAP3BQ96NU0 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CNTNAP3BQ96NU0 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CNTNAP3BQ96NU0 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CNTNAP3BQ96NU0 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CNTNAP3BQ96NU0 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CNTNAP3BQ96NU0 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.22■□□□□ 0.51
CNTNAP3BQ96NU0 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.22■□□□□ 0.51
CNTNAP3BQ96NU0 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.22■□□□□ 0.51
CNTNAP3BQ96NU0 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.22■□□□□ 0.51
CNTNAP3BQ96NU0 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CNTNAP3BQ96NU0 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CNTNAP3BQ96NU0 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CNTNAP3BQ96NU0 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CNTNAP3BQ96NU0 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CNTNAP3BQ96NU0 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
CNTNAP3BQ96NU0 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.21■□□□□ 0.51
CNTNAP3BQ96NU0 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.21■□□□□ 0.51
CNTNAP3BQ96NU0 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CNTNAP3BQ96NU0 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CNTNAP3BQ96NU0 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.21■□□□□ 0.51
CNTNAP3BQ96NU0 GPX1P2-201ENST00000429271 606 ntBASIC18.21■□□□□ 0.51
CNTNAP3BQ96NU0 LHX6-205ENST00000464484 666 ntTSL 2 BASIC18.21■□□□□ 0.51
CNTNAP3BQ96NU0 AF238378.1-201ENST00000526806 358 ntBASIC18.21■□□□□ 0.51
CNTNAP3BQ96NU0 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.21■□□□□ 0.51
CNTNAP3BQ96NU0 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.21■□□□□ 0.51
CNTNAP3BQ96NU0 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.21■□□□□ 0.51
CNTNAP3BQ96NU0 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC18.21■□□□□ 0.51
CNTNAP3BQ96NU0 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CNTNAP3BQ96NU0 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CNTNAP3BQ96NU0 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CNTNAP3BQ96NU0 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CNTNAP3BQ96NU0 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CNTNAP3BQ96NU0 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CNTNAP3BQ96NU0 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CNTNAP3BQ96NU0 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.2■□□□□ 0.5
CNTNAP3BQ96NU0 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CNTNAP3BQ96NU0 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CNTNAP3BQ96NU0 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CNTNAP3BQ96NU0 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.2■□□□□ 0.5
CNTNAP3BQ96NU0 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CNTNAP3BQ96NU0 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
CNTNAP3BQ96NU0 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.2■□□□□ 0.5
CNTNAP3BQ96NU0 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CNTNAP3BQ96NU0 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CNTNAP3BQ96NU0 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
CNTNAP3BQ96NU0 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CNTNAP3BQ96NU0 CYMP-203ENST00000474680 1263 ntBASIC18.2■□□□□ 0.5
CNTNAP3BQ96NU0 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC18.2■□□□□ 0.5
CNTNAP3BQ96NU0 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC18.2■□□□□ 0.5
CNTNAP3BQ96NU0 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CNTNAP3BQ96NU0 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.2■□□□□ 0.5
CNTNAP3BQ96NU0 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CNTNAP3BQ96NU0 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CNTNAP3BQ96NU0 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CNTNAP3BQ96NU0 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CNTNAP3BQ96NU0 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CNTNAP3BQ96NU0 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CNTNAP3BQ96NU0 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
CNTNAP3BQ96NU0 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CNTNAP3BQ96NU0 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
CNTNAP3BQ96NU0 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CNTNAP3BQ96NU0 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CNTNAP3BQ96NU0 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CNTNAP3BQ96NU0 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CNTNAP3BQ96NU0 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CNTNAP3BQ96NU0 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.19■□□□□ 0.5
CNTNAP3BQ96NU0 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC18.19■□□□□ 0.5
CNTNAP3BQ96NU0 TSPY22P-201ENST00000427496 604 ntBASIC18.19■□□□□ 0.5
CNTNAP3BQ96NU0 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC18.19■□□□□ 0.5
CNTNAP3BQ96NU0 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.19■□□□□ 0.5
CNTNAP3BQ96NU0 AL162741.1-201ENST00000565563 1558 ntBASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms