Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
IFT43Q96FT9 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
IFT43Q96FT9 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
IFT43Q96FT9 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
IFT43Q96FT9 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
IFT43Q96FT9 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
IFT43Q96FT9 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
IFT43Q96FT9 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
IFT43Q96FT9 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.64■□□□□ 0.74
IFT43Q96FT9 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
IFT43Q96FT9 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
IFT43Q96FT9 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
IFT43Q96FT9 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
IFT43Q96FT9 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
IFT43Q96FT9 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
IFT43Q96FT9 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
IFT43Q96FT9 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
IFT43Q96FT9 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
IFT43Q96FT9 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
IFT43Q96FT9 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.64■□□□□ 0.73
IFT43Q96FT9 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
IFT43Q96FT9 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.64■□□□□ 0.73
IFT43Q96FT9 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
IFT43Q96FT9 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.64■□□□□ 0.73
IFT43Q96FT9 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
IFT43Q96FT9 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
IFT43Q96FT9 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
IFT43Q96FT9 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.64■□□□□ 0.73
IFT43Q96FT9 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.64■□□□□ 0.73
IFT43Q96FT9 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.64■□□□□ 0.73
IFT43Q96FT9 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.64■□□□□ 0.73
IFT43Q96FT9 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.64■□□□□ 0.73
IFT43Q96FT9 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
IFT43Q96FT9 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.63■□□□□ 0.73
IFT43Q96FT9 AC093484.2-201ENST00000580996 2166 ntBASIC19.63■□□□□ 0.73
IFT43Q96FT9 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
IFT43Q96FT9 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
IFT43Q96FT9 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
IFT43Q96FT9 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.63■□□□□ 0.73
IFT43Q96FT9 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
IFT43Q96FT9 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.63■□□□□ 0.73
IFT43Q96FT9 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
IFT43Q96FT9 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
IFT43Q96FT9 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.63■□□□□ 0.73
IFT43Q96FT9 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.63■□□□□ 0.73
IFT43Q96FT9 AL353708.3-201ENST00000610272 989 ntBASIC19.63■□□□□ 0.73
IFT43Q96FT9 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
IFT43Q96FT9 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.63■□□□□ 0.73
IFT43Q96FT9 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.63■□□□□ 0.73
IFT43Q96FT9 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
IFT43Q96FT9 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
IFT43Q96FT9 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
IFT43Q96FT9 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
IFT43Q96FT9 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
IFT43Q96FT9 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
IFT43Q96FT9 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
IFT43Q96FT9 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
IFT43Q96FT9 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
IFT43Q96FT9 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
IFT43Q96FT9 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
IFT43Q96FT9 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
IFT43Q96FT9 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
IFT43Q96FT9 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.62■□□□□ 0.73
IFT43Q96FT9 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
IFT43Q96FT9 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
IFT43Q96FT9 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
IFT43Q96FT9 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
IFT43Q96FT9 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.62■□□□□ 0.73
IFT43Q96FT9 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
IFT43Q96FT9 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19.62■□□□□ 0.73
IFT43Q96FT9 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
IFT43Q96FT9 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.62■□□□□ 0.73
IFT43Q96FT9 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
IFT43Q96FT9 AC073195.1-201ENST00000607241 877 ntBASIC19.62■□□□□ 0.73
IFT43Q96FT9 AC026471.5-201ENST00000615068 467 ntBASIC19.62■□□□□ 0.73
IFT43Q96FT9 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
IFT43Q96FT9 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
IFT43Q96FT9 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
IFT43Q96FT9 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
IFT43Q96FT9 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
IFT43Q96FT9 ZNF815P-204ENST00000434898 1737 ntBASIC19.62■□□□□ 0.73
IFT43Q96FT9 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
IFT43Q96FT9 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.61■□□□□ 0.73
IFT43Q96FT9 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
IFT43Q96FT9 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
IFT43Q96FT9 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
IFT43Q96FT9 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.61■□□□□ 0.73
IFT43Q96FT9 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
IFT43Q96FT9 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
IFT43Q96FT9 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
IFT43Q96FT9 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.61■□□□□ 0.73
IFT43Q96FT9 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
IFT43Q96FT9 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
IFT43Q96FT9 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
IFT43Q96FT9 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
IFT43Q96FT9 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
IFT43Q96FT9 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
IFT43Q96FT9 FAM210CP-201ENST00000445714 574 ntBASIC19.61■□□□□ 0.73
IFT43Q96FT9 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
IFT43Q96FT9 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms