Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RTL9Q8NET4 SPDYE15P-201ENST00000424157 909 ntBASIC23.51■■□□□ 1.35
RTL9Q8NET4 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC23.51■■□□□ 1.35
RTL9Q8NET4 AC116407.4-201ENST00000623319 1061 ntBASIC23.51■■□□□ 1.35
RTL9Q8NET4 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
RTL9Q8NET4 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
RTL9Q8NET4 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
RTL9Q8NET4 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
RTL9Q8NET4 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
RTL9Q8NET4 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
RTL9Q8NET4 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
RTL9Q8NET4 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
RTL9Q8NET4 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
RTL9Q8NET4 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC23.5■■□□□ 1.35
RTL9Q8NET4 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC23.5■■□□□ 1.35
RTL9Q8NET4 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC23.5■■□□□ 1.35
RTL9Q8NET4 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
RTL9Q8NET4 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
RTL9Q8NET4 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
RTL9Q8NET4 AC125437.2-201ENST00000625180 2167 ntBASIC23.5■■□□□ 1.35
RTL9Q8NET4 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
RTL9Q8NET4 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
RTL9Q8NET4 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
RTL9Q8NET4 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC23.5■■□□□ 1.35
RTL9Q8NET4 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC23.5■■□□□ 1.35
RTL9Q8NET4 AC093458.2-201ENST00000623150 629 ntBASIC23.5■■□□□ 1.35
RTL9Q8NET4 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC23.5■■□□□ 1.35
RTL9Q8NET4 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
RTL9Q8NET4 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC23.5■■□□□ 1.35
RTL9Q8NET4 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC23.5■■□□□ 1.35
RTL9Q8NET4 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
RTL9Q8NET4 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
RTL9Q8NET4 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
RTL9Q8NET4 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC23.49■■□□□ 1.35
RTL9Q8NET4 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
RTL9Q8NET4 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
RTL9Q8NET4 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
RTL9Q8NET4 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
RTL9Q8NET4 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
RTL9Q8NET4 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC23.49■■□□□ 1.35
RTL9Q8NET4 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
RTL9Q8NET4 LY6E-213ENST00000522528 606 ntTSL 3 BASIC23.49■■□□□ 1.35
RTL9Q8NET4 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC23.49■■□□□ 1.35
RTL9Q8NET4 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC23.49■■□□□ 1.35
RTL9Q8NET4 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC23.49■■□□□ 1.35
RTL9Q8NET4 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
RTL9Q8NET4 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
RTL9Q8NET4 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC23.49■■□□□ 1.35
RTL9Q8NET4 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC23.49■■□□□ 1.35
RTL9Q8NET4 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
RTL9Q8NET4 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC23.48■■□□□ 1.35
RTL9Q8NET4 TEX21P-204ENST00000641479 1693 ntBASIC23.48■■□□□ 1.35
RTL9Q8NET4 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
RTL9Q8NET4 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
RTL9Q8NET4 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
RTL9Q8NET4 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC23.48■■□□□ 1.35
RTL9Q8NET4 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC23.48■■□□□ 1.35
RTL9Q8NET4 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
RTL9Q8NET4 AL136038.3-201ENST00000561909 1096 ntBASIC23.48■■□□□ 1.35
RTL9Q8NET4 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC23.48■■□□□ 1.35
RTL9Q8NET4 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC23.48■■□□□ 1.35
RTL9Q8NET4 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
RTL9Q8NET4 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
RTL9Q8NET4 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC23.48■■□□□ 1.35
RTL9Q8NET4 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
RTL9Q8NET4 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC23.48■■□□□ 1.35
RTL9Q8NET4 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
RTL9Q8NET4 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC23.47■■□□□ 1.35
RTL9Q8NET4 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
RTL9Q8NET4 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
RTL9Q8NET4 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC23.47■■□□□ 1.35
RTL9Q8NET4 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC23.47■■□□□ 1.35
RTL9Q8NET4 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
RTL9Q8NET4 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC23.47■■□□□ 1.35
RTL9Q8NET4 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
RTL9Q8NET4 AC112907.2-201ENST00000448639 330 ntBASIC23.47■■□□□ 1.35
RTL9Q8NET4 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC23.47■■□□□ 1.35
RTL9Q8NET4 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
RTL9Q8NET4 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC23.47■■□□□ 1.35
RTL9Q8NET4 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC23.47■■□□□ 1.35
RTL9Q8NET4 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC23.47■■□□□ 1.35
RTL9Q8NET4 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC23.47■■□□□ 1.35
RTL9Q8NET4 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC23.47■■□□□ 1.35
RTL9Q8NET4 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC23.47■■□□□ 1.35
RTL9Q8NET4 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
RTL9Q8NET4 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
RTL9Q8NET4 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
RTL9Q8NET4 AC036111.1-201ENST00000533973 1582 ntBASIC23.47■■□□□ 1.35
RTL9Q8NET4 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
RTL9Q8NET4 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
RTL9Q8NET4 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
RTL9Q8NET4 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC23.46■■□□□ 1.35
RTL9Q8NET4 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC23.46■■□□□ 1.35
RTL9Q8NET4 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC23.46■■□□□ 1.35
RTL9Q8NET4 PWWP2AP1-201ENST00000429776 2273 ntBASIC23.46■■□□□ 1.35
RTL9Q8NET4 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC23.46■■□□□ 1.35
RTL9Q8NET4 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC23.46■■□□□ 1.35
RTL9Q8NET4 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
RTL9Q8NET4 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
RTL9Q8NET4 PTK2-216ENST00000519881 863 ntTSL 3 BASIC23.46■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms