Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.69■□□□□ 0.42
BEST3Q8N1M1 KRT18P35-201ENST00000510488 1269 ntBASIC17.69■□□□□ 0.42
BEST3Q8N1M1 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
BEST3Q8N1M1 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.69■□□□□ 0.42
BEST3Q8N1M1 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.69■□□□□ 0.42
BEST3Q8N1M1 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
BEST3Q8N1M1 AL590326.2-201ENST00000625139 305 ntBASIC17.69■□□□□ 0.42
BEST3Q8N1M1 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.69■□□□□ 0.42
BEST3Q8N1M1 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
BEST3Q8N1M1 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
BEST3Q8N1M1 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.69■□□□□ 0.42
BEST3Q8N1M1 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
BEST3Q8N1M1 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.69■□□□□ 0.42
BEST3Q8N1M1 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
BEST3Q8N1M1 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
BEST3Q8N1M1 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
BEST3Q8N1M1 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
BEST3Q8N1M1 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
BEST3Q8N1M1 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
BEST3Q8N1M1 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
BEST3Q8N1M1 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BEST3Q8N1M1 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
BEST3Q8N1M1 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
BEST3Q8N1M1 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BEST3Q8N1M1 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BEST3Q8N1M1 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
BEST3Q8N1M1 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
BEST3Q8N1M1 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
BEST3Q8N1M1 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BEST3Q8N1M1 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BEST3Q8N1M1 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
BEST3Q8N1M1 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BEST3Q8N1M1 AC007663.1-201ENST00000438948 1240 ntBASIC17.68■□□□□ 0.42
BEST3Q8N1M1 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.68■□□□□ 0.42
BEST3Q8N1M1 AL020996.1-203ENST00000536896 2307 ntBASIC17.68■□□□□ 0.42
BEST3Q8N1M1 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
BEST3Q8N1M1 CKBP1-201ENST00000565489 1086 ntBASIC17.68■□□□□ 0.42
BEST3Q8N1M1 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.68■□□□□ 0.42
BEST3Q8N1M1 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.68■□□□□ 0.42
BEST3Q8N1M1 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.68■□□□□ 0.42
BEST3Q8N1M1 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BEST3Q8N1M1 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.68■□□□□ 0.42
BEST3Q8N1M1 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
BEST3Q8N1M1 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
BEST3Q8N1M1 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.68■□□□□ 0.42
BEST3Q8N1M1 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
BEST3Q8N1M1 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
BEST3Q8N1M1 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BEST3Q8N1M1 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
BEST3Q8N1M1 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
BEST3Q8N1M1 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BEST3Q8N1M1 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BEST3Q8N1M1 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
BEST3Q8N1M1 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
BEST3Q8N1M1 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.67■□□□□ 0.42
BEST3Q8N1M1 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
BEST3Q8N1M1 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
BEST3Q8N1M1 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.67■□□□□ 0.42
BEST3Q8N1M1 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BEST3Q8N1M1 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BEST3Q8N1M1 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.67■□□□□ 0.42
BEST3Q8N1M1 AC104076.2-201ENST00000448912 469 ntBASIC17.67■□□□□ 0.42
BEST3Q8N1M1 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BEST3Q8N1M1 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.67■□□□□ 0.42
BEST3Q8N1M1 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
BEST3Q8N1M1 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
BEST3Q8N1M1 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
BEST3Q8N1M1 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.67■□□□□ 0.42
BEST3Q8N1M1 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.67■□□□□ 0.42
BEST3Q8N1M1 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.67■□□□□ 0.42
BEST3Q8N1M1 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
BEST3Q8N1M1 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BEST3Q8N1M1 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BEST3Q8N1M1 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
BEST3Q8N1M1 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
BEST3Q8N1M1 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BEST3Q8N1M1 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BEST3Q8N1M1 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
BEST3Q8N1M1 AC092338.2-201ENST00000568827 1415 ntBASIC17.66■□□□□ 0.42
BEST3Q8N1M1 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
BEST3Q8N1M1 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
BEST3Q8N1M1 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.66■□□□□ 0.42
BEST3Q8N1M1 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BEST3Q8N1M1 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
BEST3Q8N1M1 ARMC10P1-201ENST00000313754 855 ntBASIC17.66■□□□□ 0.42
BEST3Q8N1M1 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BEST3Q8N1M1 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.66■□□□□ 0.42
BEST3Q8N1M1 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.66■□□□□ 0.42
BEST3Q8N1M1 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.66■□□□□ 0.42
BEST3Q8N1M1 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.66■□□□□ 0.42
BEST3Q8N1M1 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BEST3Q8N1M1 DUX4L26-201ENST00000489078 1255 ntBASIC17.66■□□□□ 0.42
BEST3Q8N1M1 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.66■□□□□ 0.42
BEST3Q8N1M1 AL023803.3-201ENST00000615559 522 ntBASIC17.66■□□□□ 0.42
BEST3Q8N1M1 AC006011.2-201ENST00000621313 1158 ntBASIC17.66■□□□□ 0.42
BEST3Q8N1M1 AC010653.2-201ENST00000623505 997 ntBASIC17.66■□□□□ 0.42
BEST3Q8N1M1 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BEST3Q8N1M1 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.66■□□□□ 0.42
BEST3Q8N1M1 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.66■□□□□ 0.42
BEST3Q8N1M1 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms