Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 AC079781.3-201ENST00000449110 356 ntBASIC28.91■■■□□ 2.22
CDC42BPAQ5VT25 KRT17P6-201ENST00000453795 1220 ntBASIC28.91■■■□□ 2.22
CDC42BPAQ5VT25 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC28.91■■■□□ 2.22
CDC42BPAQ5VT25 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC28.91■■■□□ 2.22
CDC42BPAQ5VT25 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC28.91■■■□□ 2.22
CDC42BPAQ5VT25 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC28.91■■■□□ 2.22
CDC42BPAQ5VT25 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC28.91■■■□□ 2.22
CDC42BPAQ5VT25 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
CDC42BPAQ5VT25 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC28.91■■■□□ 2.22
CDC42BPAQ5VT25 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC28.91■■■□□ 2.22
CDC42BPAQ5VT25 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC28.91■■■□□ 2.22
CDC42BPAQ5VT25 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
CDC42BPAQ5VT25 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC28.9■■■□□ 2.22
CDC42BPAQ5VT25 MED17-221ENST00000639724 2317 ntTSL 5 BASIC28.9■■■□□ 2.22
CDC42BPAQ5VT25 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC28.9■■■□□ 2.22
CDC42BPAQ5VT25 TEX21P-204ENST00000641479 1693 ntBASIC28.9■■■□□ 2.22
CDC42BPAQ5VT25 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
CDC42BPAQ5VT25 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC28.9■■■□□ 2.22
CDC42BPAQ5VT25 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC28.9■■■□□ 2.22
CDC42BPAQ5VT25 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC28.9■■■□□ 2.22
CDC42BPAQ5VT25 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC28.9■■■□□ 2.22
CDC42BPAQ5VT25 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC28.9■■■□□ 2.22
CDC42BPAQ5VT25 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC28.9■■■□□ 2.22
CDC42BPAQ5VT25 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC28.9■■■□□ 2.22
CDC42BPAQ5VT25 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
CDC42BPAQ5VT25 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
CDC42BPAQ5VT25 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
CDC42BPAQ5VT25 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
CDC42BPAQ5VT25 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
CDC42BPAQ5VT25 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC28.89■■■□□ 2.22
CDC42BPAQ5VT25 GAD2-202ENST00000376248 680 ntTSL 5 BASIC28.89■■■□□ 2.22
CDC42BPAQ5VT25 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
CDC42BPAQ5VT25 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
CDC42BPAQ5VT25 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC28.89■■■□□ 2.22
CDC42BPAQ5VT25 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
CDC42BPAQ5VT25 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC28.89■■■□□ 2.22
CDC42BPAQ5VT25 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
CDC42BPAQ5VT25 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC28.89■■■□□ 2.21
CDC42BPAQ5VT25 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC28.89■■■□□ 2.21
CDC42BPAQ5VT25 DRAXINP1-201ENST00000437611 948 ntBASIC28.89■■■□□ 2.21
CDC42BPAQ5VT25 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC28.89■■■□□ 2.21
CDC42BPAQ5VT25 MPI-205ENST00000562606 1052 ntTSL 3 BASIC28.89■■■□□ 2.21
CDC42BPAQ5VT25 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC28.89■■■□□ 2.21
CDC42BPAQ5VT25 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC28.89■■■□□ 2.21
CDC42BPAQ5VT25 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC28.89■■■□□ 2.21
CDC42BPAQ5VT25 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC28.88■■■□□ 2.21
CDC42BPAQ5VT25 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC28.88■■■□□ 2.21
CDC42BPAQ5VT25 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
CDC42BPAQ5VT25 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
CDC42BPAQ5VT25 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
CDC42BPAQ5VT25 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC28.88■■■□□ 2.21
CDC42BPAQ5VT25 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC28.88■■■□□ 2.21
CDC42BPAQ5VT25 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC28.88■■■□□ 2.21
CDC42BPAQ5VT25 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC28.88■■■□□ 2.21
CDC42BPAQ5VT25 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
CDC42BPAQ5VT25 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
CDC42BPAQ5VT25 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC28.88■■■□□ 2.21
CDC42BPAQ5VT25 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC28.88■■■□□ 2.21
CDC42BPAQ5VT25 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
CDC42BPAQ5VT25 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
CDC42BPAQ5VT25 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC28.87■■■□□ 2.21
CDC42BPAQ5VT25 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC28.87■■■□□ 2.21
CDC42BPAQ5VT25 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC28.87■■■□□ 2.21
CDC42BPAQ5VT25 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
CDC42BPAQ5VT25 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
CDC42BPAQ5VT25 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
CDC42BPAQ5VT25 AC004870.1-201ENST00000315132 882 ntBASIC28.87■■■□□ 2.21
CDC42BPAQ5VT25 TP73-202ENST00000354437 2140 ntTSL 5 BASIC28.87■■■□□ 2.21
CDC42BPAQ5VT25 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC28.87■■■□□ 2.21
CDC42BPAQ5VT25 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
CDC42BPAQ5VT25 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC28.87■■■□□ 2.21
CDC42BPAQ5VT25 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC28.87■■■□□ 2.21
CDC42BPAQ5VT25 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC28.87■■■□□ 2.21
CDC42BPAQ5VT25 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC28.87■■■□□ 2.21
CDC42BPAQ5VT25 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC28.87■■■□□ 2.21
CDC42BPAQ5VT25 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC28.86■■■□□ 2.21
CDC42BPAQ5VT25 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC28.86■■■□□ 2.21
CDC42BPAQ5VT25 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
CDC42BPAQ5VT25 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC28.86■■■□□ 2.21
CDC42BPAQ5VT25 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC28.86■■■□□ 2.21
CDC42BPAQ5VT25 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
CDC42BPAQ5VT25 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
CDC42BPAQ5VT25 HOXB1-202ENST00000577092 1414 ntBASIC28.86■■■□□ 2.21
CDC42BPAQ5VT25 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
CDC42BPAQ5VT25 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
CDC42BPAQ5VT25 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
CDC42BPAQ5VT25 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC28.86■■■□□ 2.21
CDC42BPAQ5VT25 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
CDC42BPAQ5VT25 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
CDC42BPAQ5VT25 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
CDC42BPAQ5VT25 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
CDC42BPAQ5VT25 AC011498.5-201ENST00000592027 486 ntBASIC28.86■■■□□ 2.21
CDC42BPAQ5VT25 KLK8-205ENST00000593490 267 ntTSL 3 BASIC28.86■■■□□ 2.21
CDC42BPAQ5VT25 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC28.86■■■□□ 2.21
CDC42BPAQ5VT25 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC28.85■■■□□ 2.21
CDC42BPAQ5VT25 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC28.85■■■□□ 2.21
CDC42BPAQ5VT25 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC28.85■■■□□ 2.21
CDC42BPAQ5VT25 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
CDC42BPAQ5VT25 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
CDC42BPAQ5VT25 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms