Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.48■□□□□ 0.55
RSPO4Q2I0M5 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.48■□□□□ 0.55
RSPO4Q2I0M5 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RSPO4Q2I0M5 AL136038.4-201ENST00000603606 1261 ntBASIC18.48■□□□□ 0.55
RSPO4Q2I0M5 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RSPO4Q2I0M5 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RSPO4Q2I0M5 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.48■□□□□ 0.55
RSPO4Q2I0M5 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RSPO4Q2I0M5 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
RSPO4Q2I0M5 Z98882.1-201ENST00000622160 2253 ntBASIC18.48■□□□□ 0.55
RSPO4Q2I0M5 KRT8P11-201ENST00000409686 1436 ntBASIC18.48■□□□□ 0.55
RSPO4Q2I0M5 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RSPO4Q2I0M5 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
RSPO4Q2I0M5 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
RSPO4Q2I0M5 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.47■□□□□ 0.55
RSPO4Q2I0M5 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RSPO4Q2I0M5 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RSPO4Q2I0M5 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.47■□□□□ 0.55
RSPO4Q2I0M5 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RSPO4Q2I0M5 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RSPO4Q2I0M5 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.47■□□□□ 0.55
RSPO4Q2I0M5 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
RSPO4Q2I0M5 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RSPO4Q2I0M5 AC233702.3-201ENST00000578656 1387 ntBASIC18.47■□□□□ 0.55
RSPO4Q2I0M5 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RSPO4Q2I0M5 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RSPO4Q2I0M5 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RSPO4Q2I0M5 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.47■□□□□ 0.55
RSPO4Q2I0M5 KRT18P67-201ENST00000432816 1264 ntBASIC18.47■□□□□ 0.55
RSPO4Q2I0M5 URGCP-206ENST00000446958 365 ntTSL 2 BASIC18.47■□□□□ 0.55
RSPO4Q2I0M5 PGAM5P1-201ENST00000518923 814 ntBASIC18.47■□□□□ 0.55
RSPO4Q2I0M5 AC009065.1-201ENST00000564055 1225 ntBASIC18.47■□□□□ 0.55
RSPO4Q2I0M5 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.47■□□□□ 0.55
RSPO4Q2I0M5 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
RSPO4Q2I0M5 Z69720.1-201ENST00000601483 472 ntBASIC18.47■□□□□ 0.55
RSPO4Q2I0M5 IGHV3-41-201ENST00000613121 348 ntBASIC18.47■□□□□ 0.55
RSPO4Q2I0M5 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.47■□□□□ 0.55
RSPO4Q2I0M5 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.47■□□□□ 0.55
RSPO4Q2I0M5 AC244015.2-201ENST00000616358 1861 ntBASIC18.47■□□□□ 0.55
RSPO4Q2I0M5 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RSPO4Q2I0M5 AL121603.2-201ENST00000557373 2117 ntBASIC18.47■□□□□ 0.55
RSPO4Q2I0M5 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RSPO4Q2I0M5 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RSPO4Q2I0M5 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RSPO4Q2I0M5 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RSPO4Q2I0M5 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
RSPO4Q2I0M5 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.46■□□□□ 0.55
RSPO4Q2I0M5 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.46■□□□□ 0.55
RSPO4Q2I0M5 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
RSPO4Q2I0M5 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RSPO4Q2I0M5 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RSPO4Q2I0M5 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RSPO4Q2I0M5 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.46■□□□□ 0.55
RSPO4Q2I0M5 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.46■□□□□ 0.55
RSPO4Q2I0M5 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC18.46■□□□□ 0.55
RSPO4Q2I0M5 AC090616.6-201ENST00000582640 721 ntBASIC18.46■□□□□ 0.55
RSPO4Q2I0M5 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.46■□□□□ 0.55
RSPO4Q2I0M5 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.46■□□□□ 0.55
RSPO4Q2I0M5 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.46■□□□□ 0.55
RSPO4Q2I0M5 AC148477.8-201ENST00000624298 468 ntBASIC18.46■□□□□ 0.55
RSPO4Q2I0M5 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.46■□□□□ 0.55
RSPO4Q2I0M5 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
RSPO4Q2I0M5 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RSPO4Q2I0M5 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.46■□□□□ 0.55
RSPO4Q2I0M5 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RSPO4Q2I0M5 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
RSPO4Q2I0M5 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RSPO4Q2I0M5 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
RSPO4Q2I0M5 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RSPO4Q2I0M5 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RSPO4Q2I0M5 AL391807.1-203ENST00000604392 2365 ntBASIC18.45■□□□□ 0.54
RSPO4Q2I0M5 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RSPO4Q2I0M5 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
RSPO4Q2I0M5 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RSPO4Q2I0M5 UPF3AP3-201ENST00000420996 769 ntBASIC18.45■□□□□ 0.54
RSPO4Q2I0M5 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC18.45■□□□□ 0.54
RSPO4Q2I0M5 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
RSPO4Q2I0M5 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.45■□□□□ 0.54
RSPO4Q2I0M5 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC18.45■□□□□ 0.54
RSPO4Q2I0M5 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RSPO4Q2I0M5 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.45■□□□□ 0.54
RSPO4Q2I0M5 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.45■□□□□ 0.54
RSPO4Q2I0M5 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RSPO4Q2I0M5 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.45■□□□□ 0.54
RSPO4Q2I0M5 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RSPO4Q2I0M5 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RSPO4Q2I0M5 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RSPO4Q2I0M5 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RSPO4Q2I0M5 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.44■□□□□ 0.54
RSPO4Q2I0M5 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
RSPO4Q2I0M5 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RSPO4Q2I0M5 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.44■□□□□ 0.54
RSPO4Q2I0M5 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RSPO4Q2I0M5 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC18.44■□□□□ 0.54
RSPO4Q2I0M5 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RSPO4Q2I0M5 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.44■□□□□ 0.54
RSPO4Q2I0M5 AC083906.6-201ENST00000641366 219 ntBASIC18.44■□□□□ 0.54
RSPO4Q2I0M5 AC079781.4-201ENST00000641908 219 ntBASIC18.44■□□□□ 0.54
RSPO4Q2I0M5 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RSPO4Q2I0M5 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms