Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH12P55289 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH12P55289 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH12P55289 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.78■□□□□ 0.44
CDH12P55289 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.78■□□□□ 0.44
CDH12P55289 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CDH12P55289 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CDH12P55289 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH12P55289 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH12P55289 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.78■□□□□ 0.44
CDH12P55289 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.78■□□□□ 0.44
CDH12P55289 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CDH12P55289 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CDH12P55289 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH12P55289 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CDH12P55289 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CDH12P55289 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDH12P55289 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CDH12P55289 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.77■□□□□ 0.44
CDH12P55289 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.77■□□□□ 0.44
CDH12P55289 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDH12P55289 AC090164.3-201ENST00000610780 2143 ntBASIC17.77■□□□□ 0.44
CDH12P55289 AC104417.2-201ENST00000562989 1793 ntBASIC17.77■□□□□ 0.44
CDH12P55289 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.77■□□□□ 0.44
CDH12P55289 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDH12P55289 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CDH12P55289 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
CDH12P55289 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CDH12P55289 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.44
CDH12P55289 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.77■□□□□ 0.44
CDH12P55289 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.77■□□□□ 0.44
CDH12P55289 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.77■□□□□ 0.44
CDH12P55289 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.77■□□□□ 0.44
CDH12P55289 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.77■□□□□ 0.44
CDH12P55289 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC17.77■□□□□ 0.44
CDH12P55289 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CDH12P55289 AL121906.2-201ENST00000621597 723 ntBASIC17.77■□□□□ 0.44
CDH12P55289 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDH12P55289 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDH12P55289 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
CDH12P55289 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.77■□□□□ 0.43
CDH12P55289 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CDH12P55289 IRX1P1-201ENST00000438849 1838 ntBASIC17.77■□□□□ 0.43
CDH12P55289 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.77■□□□□ 0.43
CDH12P55289 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CDH12P55289 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH12P55289 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH12P55289 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDH12P55289 Z98044.1-201ENST00000632503 1764 ntBASIC17.76■□□□□ 0.43
CDH12P55289 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDH12P55289 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH12P55289 AC093525.10-201ENST00000625130 1569 ntBASIC17.76■□□□□ 0.43
CDH12P55289 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH12P55289 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH12P55289 AC069152.1-201ENST00000438030 544 ntBASIC17.76■□□□□ 0.43
CDH12P55289 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC17.76■□□□□ 0.43
CDH12P55289 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.76■□□□□ 0.43
CDH12P55289 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.76■□□□□ 0.43
CDH12P55289 AC120498.8-201ENST00000614275 531 ntBASIC17.76■□□□□ 0.43
CDH12P55289 AC133041.1-202ENST00000642053 222 ntBASIC17.76■□□□□ 0.43
CDH12P55289 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH12P55289 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH12P55289 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.76■□□□□ 0.43
CDH12P55289 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH12P55289 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH12P55289 AP006587.1-201ENST00000534129 1502 ntBASIC17.76■□□□□ 0.43
CDH12P55289 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH12P55289 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
CDH12P55289 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH12P55289 AC018470.1-201ENST00000624790 3129 ntBASIC17.76■□□□□ 0.43
CDH12P55289 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
CDH12P55289 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH12P55289 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH12P55289 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.76■□□□□ 0.43
CDH12P55289 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CDH12P55289 AL390961.4-201ENST00000623958 2535 ntBASIC17.75■□□□□ 0.43
CDH12P55289 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH12P55289 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH12P55289 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH12P55289 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDH12P55289 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDH12P55289 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.75■□□□□ 0.43
CDH12P55289 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDH12P55289 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH12P55289 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CDH12P55289 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH12P55289 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH12P55289 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.75■□□□□ 0.43
CDH12P55289 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.75■□□□□ 0.43
CDH12P55289 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.75■□□□□ 0.43
CDH12P55289 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.75■□□□□ 0.43
CDH12P55289 AC104771.1-201ENST00000603335 964 ntBASIC17.75■□□□□ 0.43
CDH12P55289 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.75■□□□□ 0.43
CDH12P55289 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.75■□□□□ 0.43
CDH12P55289 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.75■□□□□ 0.43
CDH12P55289 AC135050.7-201ENST00000624508 2218 ntBASIC17.75■□□□□ 0.43
CDH12P55289 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH12P55289 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.75■□□□□ 0.43
CDH12P55289 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH12P55289 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms