Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
HCFC1P51610 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HCFC1P51610 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HCFC1P51610 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC16.64■□□□□ 0.25
HCFC1P51610 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC16.64■□□□□ 0.25
HCFC1P51610 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC16.64■□□□□ 0.25
HCFC1P51610 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC16.64■□□□□ 0.25
HCFC1P51610 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.64■□□□□ 0.25
HCFC1P51610 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HCFC1P51610 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC16.64■□□□□ 0.25
HCFC1P51610 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HCFC1P51610 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HCFC1P51610 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HCFC1P51610 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HCFC1P51610 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.63■□□□□ 0.25
HCFC1P51610 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HCFC1P51610 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.63■□□□□ 0.25
HCFC1P51610 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.63■□□□□ 0.25
HCFC1P51610 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.63■□□□□ 0.25
HCFC1P51610 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
HCFC1P51610 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HCFC1P51610 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HCFC1P51610 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.63■□□□□ 0.25
HCFC1P51610 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HCFC1P51610 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HCFC1P51610 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HCFC1P51610 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
HCFC1P51610 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC16.63■□□□□ 0.25
HCFC1P51610 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
HCFC1P51610 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HCFC1P51610 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
HCFC1P51610 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HCFC1P51610 AC246785.2-201ENST00000432512 513 ntBASIC16.63■□□□□ 0.25
HCFC1P51610 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.63■□□□□ 0.25
HCFC1P51610 MIR3652-201ENST00000579335 131 ntBASIC16.63■□□□□ 0.25
HCFC1P51610 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HCFC1P51610 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC16.63■□□□□ 0.25
HCFC1P51610 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HCFC1P51610 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC16.63■□□□□ 0.25
HCFC1P51610 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HCFC1P51610 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
HCFC1P51610 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
HCFC1P51610 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC16.63■□□□□ 0.25
HCFC1P51610 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.63■□□□□ 0.25
HCFC1P51610 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC16.62■□□□□ 0.25
HCFC1P51610 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
HCFC1P51610 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC16.62■□□□□ 0.25
HCFC1P51610 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
HCFC1P51610 USP39-204ENST00000409766 2033 ntTSL 2 BASIC16.62■□□□□ 0.25
HCFC1P51610 AL512408.1-201ENST00000569378 2000 ntBASIC16.62■□□□□ 0.25
HCFC1P51610 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
HCFC1P51610 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HCFC1P51610 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.62■□□□□ 0.25
HCFC1P51610 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.62■□□□□ 0.25
HCFC1P51610 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.62■□□□□ 0.25
HCFC1P51610 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.62■□□□□ 0.25
HCFC1P51610 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.62■□□□□ 0.25
HCFC1P51610 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.62■□□□□ 0.25
HCFC1P51610 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
HCFC1P51610 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
HCFC1P51610 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HCFC1P51610 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
HCFC1P51610 AC104417.2-201ENST00000562989 1793 ntBASIC16.62■□□□□ 0.25
HCFC1P51610 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.62■□□□□ 0.25
HCFC1P51610 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HCFC1P51610 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC16.62■□□□□ 0.25
HCFC1P51610 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.62■□□□□ 0.25
HCFC1P51610 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
HCFC1P51610 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
HCFC1P51610 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
HCFC1P51610 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HCFC1P51610 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC16.61■□□□□ 0.25
HCFC1P51610 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
HCFC1P51610 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HCFC1P51610 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HCFC1P51610 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
HCFC1P51610 RASA4DP-201ENST00000460726 1199 ntBASIC16.61■□□□□ 0.25
HCFC1P51610 AC092597.1-201ENST00000487352 616 ntBASIC16.61■□□□□ 0.25
HCFC1P51610 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
HCFC1P51610 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.61■□□□□ 0.25
HCFC1P51610 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HCFC1P51610 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
HCFC1P51610 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.61■□□□□ 0.25
HCFC1P51610 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.61■□□□□ 0.25
HCFC1P51610 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC16.61■□□□□ 0.25
HCFC1P51610 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
HCFC1P51610 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HCFC1P51610 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HCFC1P51610 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HCFC1P51610 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.6■□□□□ 0.25
HCFC1P51610 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HCFC1P51610 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.6■□□□□ 0.25
HCFC1P51610 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC16.6■□□□□ 0.25
HCFC1P51610 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.6■□□□□ 0.25
HCFC1P51610 AC012615.1-201ENST00000565797 1299 ntBASIC16.6■□□□□ 0.25
HCFC1P51610 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HCFC1P51610 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HCFC1P51610 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.6■□□□□ 0.25
HCFC1P51610 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.6■□□□□ 0.25
HCFC1P51610 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms