Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RAB40ALP0C0E4 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RAB40ALP0C0E4 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
RAB40ALP0C0E4 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RAB40ALP0C0E4 PCDHAC2-203ENST00000615316 3011 ntBASIC17.99■□□□□ 0.47
RAB40ALP0C0E4 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RAB40ALP0C0E4 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.99■□□□□ 0.47
RAB40ALP0C0E4 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.99■□□□□ 0.47
RAB40ALP0C0E4 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RAB40ALP0C0E4 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
RAB40ALP0C0E4 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
RAB40ALP0C0E4 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
RAB40ALP0C0E4 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
RAB40ALP0C0E4 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RAB40ALP0C0E4 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RAB40ALP0C0E4 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RAB40ALP0C0E4 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.98■□□□□ 0.47
RAB40ALP0C0E4 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.98■□□□□ 0.47
RAB40ALP0C0E4 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RAB40ALP0C0E4 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
RAB40ALP0C0E4 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RAB40ALP0C0E4 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.98■□□□□ 0.47
RAB40ALP0C0E4 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RAB40ALP0C0E4 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RAB40ALP0C0E4 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.98■□□□□ 0.47
RAB40ALP0C0E4 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.98■□□□□ 0.47
RAB40ALP0C0E4 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RAB40ALP0C0E4 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.98■□□□□ 0.47
RAB40ALP0C0E4 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.98■□□□□ 0.47
RAB40ALP0C0E4 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.98■□□□□ 0.47
RAB40ALP0C0E4 AC092647.4-201ENST00000457211 535 ntBASIC17.98■□□□□ 0.47
RAB40ALP0C0E4 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.98■□□□□ 0.47
RAB40ALP0C0E4 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.98■□□□□ 0.47
RAB40ALP0C0E4 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.98■□□□□ 0.47
RAB40ALP0C0E4 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
RAB40ALP0C0E4 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
RAB40ALP0C0E4 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.98■□□□□ 0.47
RAB40ALP0C0E4 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.98■□□□□ 0.47
RAB40ALP0C0E4 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RAB40ALP0C0E4 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RAB40ALP0C0E4 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RAB40ALP0C0E4 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RAB40ALP0C0E4 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
RAB40ALP0C0E4 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RAB40ALP0C0E4 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RAB40ALP0C0E4 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RAB40ALP0C0E4 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.98■□□□□ 0.47
RAB40ALP0C0E4 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
RAB40ALP0C0E4 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.98■□□□□ 0.47
RAB40ALP0C0E4 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.98■□□□□ 0.47
RAB40ALP0C0E4 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.98■□□□□ 0.47
RAB40ALP0C0E4 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RAB40ALP0C0E4 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RAB40ALP0C0E4 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RAB40ALP0C0E4 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RAB40ALP0C0E4 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RAB40ALP0C0E4 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RAB40ALP0C0E4 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RAB40ALP0C0E4 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
RAB40ALP0C0E4 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.97■□□□□ 0.47
RAB40ALP0C0E4 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.97■□□□□ 0.47
RAB40ALP0C0E4 AC011558.1-201ENST00000623459 338 ntBASIC17.97■□□□□ 0.47
RAB40ALP0C0E4 MYC-208ENST00000641036 567 ntBASIC17.97■□□□□ 0.47
RAB40ALP0C0E4 AC099778.1-201ENST00000568593 1911 ntBASIC17.97■□□□□ 0.47
RAB40ALP0C0E4 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.97■□□□□ 0.47
RAB40ALP0C0E4 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.97■□□□□ 0.47
RAB40ALP0C0E4 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.97■□□□□ 0.47
RAB40ALP0C0E4 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RAB40ALP0C0E4 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
RAB40ALP0C0E4 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RAB40ALP0C0E4 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.97■□□□□ 0.47
RAB40ALP0C0E4 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.97■□□□□ 0.47
RAB40ALP0C0E4 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RAB40ALP0C0E4 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
RAB40ALP0C0E4 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
RAB40ALP0C0E4 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAB40ALP0C0E4 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAB40ALP0C0E4 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAB40ALP0C0E4 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAB40ALP0C0E4 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RAB40ALP0C0E4 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAB40ALP0C0E4 HOMER2P1-201ENST00000455653 964 ntBASIC17.96■□□□□ 0.47
RAB40ALP0C0E4 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.96■□□□□ 0.47
RAB40ALP0C0E4 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RAB40ALP0C0E4 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.96■□□□□ 0.47
RAB40ALP0C0E4 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.96■□□□□ 0.47
RAB40ALP0C0E4 AC140113.3-201ENST00000605663 199 ntBASIC17.96■□□□□ 0.47
RAB40ALP0C0E4 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.96■□□□□ 0.47
RAB40ALP0C0E4 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.96■□□□□ 0.47
RAB40ALP0C0E4 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAB40ALP0C0E4 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
RAB40ALP0C0E4 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
RAB40ALP0C0E4 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.96■□□□□ 0.46
RAB40ALP0C0E4 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
RAB40ALP0C0E4 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.96■□□□□ 0.46
RAB40ALP0C0E4 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.46
RAB40ALP0C0E4 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.96■□□□□ 0.46
RAB40ALP0C0E4 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
RAB40ALP0C0E4 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RAB40ALP0C0E4 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 278.4 ms