Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RHOP08100 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RHOP08100 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
RHOP08100 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RHOP08100 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RHOP08100 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RHOP08100 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.76■□□□□ 0.75
RHOP08100 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RHOP08100 AL157384.1-201ENST00000445995 2473 ntBASIC19.76■□□□□ 0.75
RHOP08100 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RHOP08100 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RHOP08100 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RHOP08100 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.76■□□□□ 0.75
RHOP08100 ATP5G2P1-201ENST00000433580 426 ntBASIC19.76■□□□□ 0.75
RHOP08100 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC19.76■□□□□ 0.75
RHOP08100 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.76■□□□□ 0.75
RHOP08100 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
RHOP08100 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.76■□□□□ 0.75
RHOP08100 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.76■□□□□ 0.75
RHOP08100 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RHOP08100 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
RHOP08100 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RHOP08100 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RHOP08100 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RHOP08100 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
RHOP08100 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RHOP08100 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RHOP08100 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.75■□□□□ 0.75
RHOP08100 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.75■□□□□ 0.75
RHOP08100 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
RHOP08100 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RHOP08100 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.75■□□□□ 0.75
RHOP08100 AL645929.1-201ENST00000420084 975 ntBASIC19.75■□□□□ 0.75
RHOP08100 MCCD1P1-208ENST00000445732 328 ntBASIC19.75■□□□□ 0.75
RHOP08100 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.75■□□□□ 0.75
RHOP08100 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.75■□□□□ 0.75
RHOP08100 BCL10-202ENST00000620248 774 ntTSL 5 BASIC19.75■□□□□ 0.75
RHOP08100 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RHOP08100 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RHOP08100 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
RHOP08100 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RHOP08100 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
RHOP08100 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RHOP08100 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RHOP08100 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.75■□□□□ 0.75
RHOP08100 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RHOP08100 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
RHOP08100 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
RHOP08100 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
RHOP08100 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RHOP08100 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.74■□□□□ 0.75
RHOP08100 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.74■□□□□ 0.75
RHOP08100 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RHOP08100 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
RHOP08100 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.74■□□□□ 0.75
RHOP08100 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.74■□□□□ 0.75
RHOP08100 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.74■□□□□ 0.75
RHOP08100 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RHOP08100 MIR3180-5-201ENST00000583743 153 ntBASIC19.74■□□□□ 0.75
RHOP08100 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.74■□□□□ 0.75
RHOP08100 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
RHOP08100 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RHOP08100 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RHOP08100 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.74■□□□□ 0.75
RHOP08100 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.74■□□□□ 0.75
RHOP08100 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
RHOP08100 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RHOP08100 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RHOP08100 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RHOP08100 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
RHOP08100 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RHOP08100 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RHOP08100 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
RHOP08100 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC19.73■□□□□ 0.75
RHOP08100 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RHOP08100 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC19.73■□□□□ 0.75
RHOP08100 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RHOP08100 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RHOP08100 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RHOP08100 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.73■□□□□ 0.75
RHOP08100 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RHOP08100 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.72■□□□□ 0.75
RHOP08100 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.72■□□□□ 0.75
RHOP08100 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
RHOP08100 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RHOP08100 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
RHOP08100 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.72■□□□□ 0.75
RHOP08100 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RHOP08100 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.72■□□□□ 0.75
RHOP08100 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RHOP08100 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RHOP08100 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RHOP08100 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RHOP08100 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RHOP08100 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RHOP08100 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC19.72■□□□□ 0.75
RHOP08100 PP7080-204ENST00000510714 601 ntTSL 3 BASIC19.72■□□□□ 0.75
RHOP08100 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RHOP08100 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.72■□□□□ 0.75
RHOP08100 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms