Protein–RNA interactions for Protein: O60563

CCNT1, Cyclin-T1, humanhuman

Known RBP Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1O60563 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC21.68■■□□□ 1.06
CCNT1O60563 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
CCNT1O60563 AC097488.1-201ENST00000507834 756 ntBASIC21.68■■□□□ 1.06
CCNT1O60563 PRSS44-201ENST00000515154 1146 ntBASIC21.68■■□□□ 1.06
CCNT1O60563 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC21.68■■□□□ 1.06
CCNT1O60563 SLC25A1P4-201ENST00000567977 778 ntBASIC21.68■■□□□ 1.06
CCNT1O60563 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC21.68■■□□□ 1.06
CCNT1O60563 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC21.68■■□□□ 1.06
CCNT1O60563 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC21.68■■□□□ 1.06
CCNT1O60563 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC21.68■■□□□ 1.06
CCNT1O60563 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC21.68■■□□□ 1.06
CCNT1O60563 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC21.68■■□□□ 1.06
CCNT1O60563 FEM1AP3-201ENST00000403722 1741 ntBASIC21.68■■□□□ 1.06
CCNT1O60563 UBQLN4P1-201ENST00000461599 1801 ntBASIC21.68■■□□□ 1.06
CCNT1O60563 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC21.68■■□□□ 1.06
CCNT1O60563 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCNT1O60563 FP475955.4-201ENST00000623131 1990 ntBASIC21.68■■□□□ 1.06
CCNT1O60563 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCNT1O60563 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CCNT1O60563 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CCNT1O60563 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC21.68■■□□□ 1.06
CCNT1O60563 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCNT1O60563 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
CCNT1O60563 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCNT1O60563 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCNT1O60563 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCNT1O60563 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC21.67■■□□□ 1.06
CCNT1O60563 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC21.67■■□□□ 1.06
CCNT1O60563 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCNT1O60563 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC21.67■■□□□ 1.06
CCNT1O60563 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCNT1O60563 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
CCNT1O60563 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
CCNT1O60563 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCNT1O60563 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC21.67■■□□□ 1.06
CCNT1O60563 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CCNT1O60563 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCNT1O60563 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCNT1O60563 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CCNT1O60563 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCNT1O60563 AC079598.2-202ENST00000546624 1451 ntBASIC21.67■■□□□ 1.06
CCNT1O60563 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC21.67■■□□□ 1.06
CCNT1O60563 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CCNT1O60563 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
CCNT1O60563 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC21.67■■□□□ 1.06
CCNT1O60563 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
CCNT1O60563 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC21.67■■□□□ 1.06
CCNT1O60563 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC21.67■■□□□ 1.06
CCNT1O60563 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
CCNT1O60563 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC21.67■■□□□ 1.06
CCNT1O60563 CKBP1-201ENST00000565489 1086 ntBASIC21.67■■□□□ 1.06
CCNT1O60563 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC21.67■■□□□ 1.06
CCNT1O60563 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC21.67■■□□□ 1.06
CCNT1O60563 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCNT1O60563 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
CCNT1O60563 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC21.67■■□□□ 1.06
CCNT1O60563 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCNT1O60563 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCNT1O60563 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CCNT1O60563 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC21.66■■□□□ 1.06
CCNT1O60563 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
CCNT1O60563 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC21.66■■□□□ 1.06
CCNT1O60563 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
CCNT1O60563 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CCNT1O60563 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC21.66■■□□□ 1.06
CCNT1O60563 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
CCNT1O60563 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC21.66■■□□□ 1.06
CCNT1O60563 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC21.66■■□□□ 1.06
CCNT1O60563 FDX2-206ENST00000492239 773 ntTSL 2 BASIC21.66■■□□□ 1.06
CCNT1O60563 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CCNT1O60563 AP000525.1-201ENST00000608286 694 ntBASIC21.66■■□□□ 1.06
CCNT1O60563 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCNT1O60563 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC21.66■■□□□ 1.06
CCNT1O60563 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCNT1O60563 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CCNT1O60563 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
CCNT1O60563 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCNT1O60563 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CCNT1O60563 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCNT1O60563 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC21.65■■□□□ 1.06
CCNT1O60563 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
CCNT1O60563 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCNT1O60563 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
CCNT1O60563 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
CCNT1O60563 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCNT1O60563 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCNT1O60563 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCNT1O60563 CRYGFP-201ENST00000418459 633 ntBASIC21.65■■□□□ 1.06
CCNT1O60563 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC21.65■■□□□ 1.06
CCNT1O60563 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CCNT1O60563 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CCNT1O60563 GRAMD4P8-201ENST00000605465 1115 ntBASIC21.65■■□□□ 1.06
CCNT1O60563 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CCNT1O60563 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCNT1O60563 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC21.65■■□□□ 1.06
CCNT1O60563 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CCNT1O60563 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
CCNT1O60563 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CCNT1O60563 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC21.64■■□□□ 1.06
CCNT1O60563 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC21.64■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms