Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 OR5AL2P-201ENST00000532185 920 ntBASIC3.53□□□□□ -1.84
PKP3Q9Y446 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.53□□□□□ -1.84
PKP3Q9Y446 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.53□□□□□ -1.84
PKP3Q9Y446 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.53□□□□□ -1.84
PKP3Q9Y446 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.53□□□□□ -1.84
PKP3Q9Y446 MIR3921-201ENST00000577308 85 ntBASIC3.53□□□□□ -1.84
PKP3Q9Y446 AP002826.1-201ENST00000608835 315 ntBASIC3.53□□□□□ -1.84
PKP3Q9Y446 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
PKP3Q9Y446 U4.6-201ENST00000621618 127 ntBASIC3.53□□□□□ -1.84
PKP3Q9Y446 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.53□□□□□ -1.84
PKP3Q9Y446 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.53□□□□□ -1.84
PKP3Q9Y446 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.53□□□□□ -1.84
PKP3Q9Y446 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
PKP3Q9Y446 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
PKP3Q9Y446 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
PKP3Q9Y446 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PKP3Q9Y446 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
PKP3Q9Y446 AC068647.1-201ENST00000489539 2265 ntBASIC3.53□□□□□ -1.85
PKP3Q9Y446 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PKP3Q9Y446 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PKP3Q9Y446 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PKP3Q9Y446 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PKP3Q9Y446 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
PKP3Q9Y446 OTUD4P1-201ENST00000237841 3067 ntBASIC3.52□□□□□ -1.85
PKP3Q9Y446 FRG1CP-201ENST00000358464 769 ntBASIC3.52□□□□□ -1.85
PKP3Q9Y446 RNU6-877P-201ENST00000383868 107 ntBASIC3.52□□□□□ -1.85
PKP3Q9Y446 SNORA69-201ENST00000383895 132 ntBASIC3.52□□□□□ -1.85
PKP3Q9Y446 RNU2-71P-201ENST00000411395 189 ntBASIC3.52□□□□□ -1.85
PKP3Q9Y446 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.52□□□□□ -1.85
PKP3Q9Y446 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.52□□□□□ -1.85
PKP3Q9Y446 AC068533.1-201ENST00000418542 415 ntBASIC3.52□□□□□ -1.85
PKP3Q9Y446 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.52□□□□□ -1.85
PKP3Q9Y446 HSPD1P21-201ENST00000436541 245 ntBASIC3.52□□□□□ -1.85
PKP3Q9Y446 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC3.52□□□□□ -1.85
PKP3Q9Y446 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.52□□□□□ -1.85
PKP3Q9Y446 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.52□□□□□ -1.85
PKP3Q9Y446 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.52□□□□□ -1.85
PKP3Q9Y446 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.52□□□□□ -1.85
PKP3Q9Y446 RPS29P15-201ENST00000458329 171 ntBASIC3.52□□□□□ -1.85
PKP3Q9Y446 RPS20P20-201ENST00000460498 340 ntBASIC3.52□□□□□ -1.85
PKP3Q9Y446 AC106707.2-201ENST00000484182 374 ntBASIC3.52□□□□□ -1.85
PKP3Q9Y446 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.52□□□□□ -1.85
PKP3Q9Y446 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.52□□□□□ -1.85
PKP3Q9Y446 AC026403.1-201ENST00000518938 295 ntBASIC3.52□□□□□ -1.85
PKP3Q9Y446 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.52□□□□□ -1.85
PKP3Q9Y446 AC103843.2-201ENST00000530523 682 ntBASIC3.52□□□□□ -1.85
PKP3Q9Y446 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.52□□□□□ -1.85
PKP3Q9Y446 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.52□□□□□ -1.85
PKP3Q9Y446 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.52□□□□□ -1.85
PKP3Q9Y446 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.52□□□□□ -1.85
PKP3Q9Y446 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.52□□□□□ -1.85
PKP3Q9Y446 RNVU1-4-201ENST00000612985 164 ntBASIC3.52□□□□□ -1.85
PKP3Q9Y446 AC002553.4-201ENST00000616896 331 ntBASIC3.52□□□□□ -1.85
PKP3Q9Y446 AL354950.2-201ENST00000617939 290 ntBASIC3.52□□□□□ -1.85
PKP3Q9Y446 YWHAEP7-203ENST00000622054 312 ntBASIC3.52□□□□□ -1.85
PKP3Q9Y446 AC025034.2-201ENST00000623264 286 ntBASIC3.52□□□□□ -1.85
PKP3Q9Y446 FER-210ENST00000628534 558 ntTSL 5 BASIC3.52□□□□□ -1.85
PKP3Q9Y446 U6.114-201ENST00000636407 96 ntBASIC3.52□□□□□ -1.85
PKP3Q9Y446 AC012442.3-202ENST00000636742 206 ntBASIC3.52□□□□□ -1.85
PKP3Q9Y446 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC3.52□□□□□ -1.85
PKP3Q9Y446 AC009093.8-201ENST00000641769 292 ntBASIC3.52□□□□□ -1.85
PKP3Q9Y446 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.52□□□□□ -1.85
PKP3Q9Y446 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PKP3Q9Y446 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
PKP3Q9Y446 PRO1804-201ENST00000623780 2050 ntBASIC3.51□□□□□ -1.85
PKP3Q9Y446 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.51□□□□□ -1.85
PKP3Q9Y446 CKAP2P1-201ENST00000555477 2049 ntBASIC3.51□□□□□ -1.85
PKP3Q9Y446 OR4G2P-202ENST00000641004 1759 ntBASIC3.51□□□□□ -1.85
PKP3Q9Y446 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.51□□□□□ -1.85
PKP3Q9Y446 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PKP3Q9Y446 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
PKP3Q9Y446 RNU6-996P-201ENST00000365438 107 ntBASIC3.51□□□□□ -1.85
PKP3Q9Y446 RNU6-946P-201ENST00000383878 107 ntBASIC3.51□□□□□ -1.85
PKP3Q9Y446 SNORA24.1-201ENST00000384401 135 ntBASIC3.51□□□□□ -1.85
PKP3Q9Y446 MIR514A1-201ENST00000385133 98 ntBASIC3.51□□□□□ -1.85
PKP3Q9Y446 AL136116.1-201ENST00000403591 381 ntBASIC3.51□□□□□ -1.85
PKP3Q9Y446 MIR1290-201ENST00000408735 78 ntBASIC3.51□□□□□ -1.85
PKP3Q9Y446 RNU6-908P-201ENST00000410160 94 ntBASIC3.51□□□□□ -1.85
PKP3Q9Y446 RN7SKP140-201ENST00000411196 284 ntBASIC3.51□□□□□ -1.85
PKP3Q9Y446 AC114491.1-201ENST00000416095 246 ntBASIC3.51□□□□□ -1.85
PKP3Q9Y446 SYF2P2-201ENST00000417620 583 ntBASIC3.51□□□□□ -1.85
PKP3Q9Y446 DBIP2-201ENST00000419076 262 ntBASIC3.51□□□□□ -1.85
PKP3Q9Y446 ZNF90P2-204ENST00000419323 1075 ntBASIC3.51□□□□□ -1.85
PKP3Q9Y446 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.51□□□□□ -1.85
PKP3Q9Y446 TXNP1-201ENST00000441872 371 ntBASIC3.51□□□□□ -1.85
PKP3Q9Y446 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.51□□□□□ -1.85
PKP3Q9Y446 NEFMP1-201ENST00000443423 1006 ntBASIC3.51□□□□□ -1.85
PKP3Q9Y446 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.51□□□□□ -1.85
PKP3Q9Y446 AC233702.1-201ENST00000482905 502 ntBASIC3.51□□□□□ -1.85
PKP3Q9Y446 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.51□□□□□ -1.85
PKP3Q9Y446 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.51□□□□□ -1.85
PKP3Q9Y446 PRDX4P1-201ENST00000507189 574 ntBASIC3.51□□□□□ -1.85
PKP3Q9Y446 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.51□□□□□ -1.85
PKP3Q9Y446 AC108078.2-201ENST00000510750 236 ntBASIC3.51□□□□□ -1.85
PKP3Q9Y446 RNA5SP503-201ENST00000517047 117 ntBASIC3.51□□□□□ -1.85
PKP3Q9Y446 RN7SKP258-201ENST00000517151 304 ntBASIC3.51□□□□□ -1.85
PKP3Q9Y446 AC134698.4-201ENST00000523451 826 ntBASIC3.51□□□□□ -1.85
PKP3Q9Y446 AP006587.4-201ENST00000526053 529 ntBASIC3.51□□□□□ -1.85
PKP3Q9Y446 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.51□□□□□ -1.85
PKP3Q9Y446 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms