Protein–RNA interactions for Protein: Q9Y2N7

HIF3A, Hypoxia-inducible factor 3-alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3AQ9Y2N7 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC4.62□□□□□ -1.67
HIF3AQ9Y2N7 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.62□□□□□ -1.67
HIF3AQ9Y2N7 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.62□□□□□ -1.67
HIF3AQ9Y2N7 SNORD95-201ENST00000579879 68 ntBASIC4.62□□□□□ -1.67
HIF3AQ9Y2N7 SNORD84-203ENST00000584275 78 ntBASIC4.62□□□□□ -1.67
HIF3AQ9Y2N7 AC107294.1-201ENST00000609524 467 ntBASIC4.62□□□□□ -1.67
HIF3AQ9Y2N7 AC109309.2-201ENST00000612597 332 ntBASIC4.62□□□□□ -1.67
HIF3AQ9Y2N7 AC099669.2-201ENST00000616549 437 ntBASIC4.62□□□□□ -1.67
HIF3AQ9Y2N7 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.62□□□□□ -1.67
HIF3AQ9Y2N7 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HIF3AQ9Y2N7 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HIF3AQ9Y2N7 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HIF3AQ9Y2N7 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HIF3AQ9Y2N7 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HIF3AQ9Y2N7 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HIF3AQ9Y2N7 SDAD1P2-201ENST00000441308 2028 ntBASIC4.62□□□□□ -1.67
HIF3AQ9Y2N7 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.62□□□□□ -1.67
HIF3AQ9Y2N7 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.61□□□□□ -1.67
HIF3AQ9Y2N7 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HIF3AQ9Y2N7 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.61□□□□□ -1.67
HIF3AQ9Y2N7 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HIF3AQ9Y2N7 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.61□□□□□ -1.67
HIF3AQ9Y2N7 AL139811.1-201ENST00000424779 2299 ntBASIC4.61□□□□□ -1.67
HIF3AQ9Y2N7 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
HIF3AQ9Y2N7 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HIF3AQ9Y2N7 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC4.61□□□□□ -1.67
HIF3AQ9Y2N7 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
HIF3AQ9Y2N7 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.61□□□□□ -1.67
HIF3AQ9Y2N7 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HIF3AQ9Y2N7 RNU6-37P-201ENST00000362692 107 ntBASIC4.61□□□□□ -1.67
HIF3AQ9Y2N7 RN7SKP113-201ENST00000363891 295 ntBASIC4.61□□□□□ -1.67
HIF3AQ9Y2N7 RNU6-11P-201ENST00000364234 107 ntBASIC4.61□□□□□ -1.67
HIF3AQ9Y2N7 RNU6-7-201ENST00000364784 107 ntBASIC4.61□□□□□ -1.67
HIF3AQ9Y2N7 U3.13-201ENST00000364804 214 ntBASIC4.61□□□□□ -1.67
HIF3AQ9Y2N7 RNU6-8-201ENST00000365467 107 ntBASIC4.61□□□□□ -1.67
HIF3AQ9Y2N7 RNU6-25P-201ENST00000383873 107 ntBASIC4.61□□□□□ -1.67
HIF3AQ9Y2N7 RNU6-1-201ENST00000383898 107 ntBASIC4.61□□□□□ -1.67
HIF3AQ9Y2N7 SNORA2.3-201ENST00000383920 135 ntBASIC4.61□□□□□ -1.67
HIF3AQ9Y2N7 RNU6-1074P-201ENST00000383995 104 ntBASIC4.61□□□□□ -1.67
HIF3AQ9Y2N7 RNU6-36P-201ENST00000384172 107 ntBASIC4.61□□□□□ -1.67
HIF3AQ9Y2N7 RNU6-4P-201ENST00000384205 107 ntBASIC4.61□□□□□ -1.67
HIF3AQ9Y2N7 RNU6-5P-201ENST00000384238 107 ntBASIC4.61□□□□□ -1.67
HIF3AQ9Y2N7 RNU6-3P-201ENST00000384314 107 ntBASIC4.61□□□□□ -1.67
HIF3AQ9Y2N7 RNU6-16P-201ENST00000384385 107 ntBASIC4.61□□□□□ -1.67
HIF3AQ9Y2N7 RNU6-102P-201ENST00000384485 104 ntBASIC4.61□□□□□ -1.67
HIF3AQ9Y2N7 RNU6-15P-201ENST00000384534 107 ntBASIC4.61□□□□□ -1.67
HIF3AQ9Y2N7 RNU6-1081P-201ENST00000384537 107 ntBASIC4.61□□□□□ -1.67
HIF3AQ9Y2N7 RNU6-2-201ENST00000384627 107 ntBASIC4.61□□□□□ -1.67
HIF3AQ9Y2N7 RNU6-29P-201ENST00000384637 107 ntBASIC4.61□□□□□ -1.67
HIF3AQ9Y2N7 RNU6-9-201ENST00000384776 107 ntBASIC4.61□□□□□ -1.67
HIF3AQ9Y2N7 RPS29P13-201ENST00000402041 169 ntBASIC4.61□□□□□ -1.67
HIF3AQ9Y2N7 AC087650.1-201ENST00000431445 468 ntBASIC4.61□□□□□ -1.67
HIF3AQ9Y2N7 AL591043.1-201ENST00000432461 424 ntBASIC4.61□□□□□ -1.67
HIF3AQ9Y2N7 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC4.61□□□□□ -1.67
HIF3AQ9Y2N7 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.61□□□□□ -1.67
HIF3AQ9Y2N7 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.61□□□□□ -1.67
HIF3AQ9Y2N7 AC073073.1-201ENST00000493920 463 ntBASIC4.61□□□□□ -1.67
HIF3AQ9Y2N7 RPS23P5-201ENST00000495419 428 ntBASIC4.61□□□□□ -1.67
HIF3AQ9Y2N7 AL136038.1-201ENST00000497246 351 ntBASIC4.61□□□□□ -1.67
HIF3AQ9Y2N7 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.61□□□□□ -1.67
HIF3AQ9Y2N7 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC4.61□□□□□ -1.67
HIF3AQ9Y2N7 MIR892C-201ENST00000516410 77 ntBASIC4.61□□□□□ -1.67
HIF3AQ9Y2N7 AC024940.3-201ENST00000538551 316 ntBASIC4.61□□□□□ -1.67
HIF3AQ9Y2N7 AL157871.3-201ENST00000557231 293 ntBASIC4.61□□□□□ -1.67
HIF3AQ9Y2N7 NDUFB4P11-201ENST00000560510 395 ntBASIC4.61□□□□□ -1.67
HIF3AQ9Y2N7 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC4.61□□□□□ -1.67
HIF3AQ9Y2N7 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.61□□□□□ -1.67
HIF3AQ9Y2N7 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.61□□□□□ -1.67
HIF3AQ9Y2N7 MZT1P2-201ENST00000604387 248 ntBASIC4.61□□□□□ -1.67
HIF3AQ9Y2N7 RNU6-6P-201ENST00000606623 107 ntBASIC4.61□□□□□ -1.67
HIF3AQ9Y2N7 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.61□□□□□ -1.67
HIF3AQ9Y2N7 AC093799.2-201ENST00000610062 578 ntBASIC4.61□□□□□ -1.67
HIF3AQ9Y2N7 MIR6768-201ENST00000610734 72 ntBASIC4.61□□□□□ -1.67
HIF3AQ9Y2N7 SDR42E1P1-201ENST00000611327 477 ntBASIC4.61□□□□□ -1.67
HIF3AQ9Y2N7 RPSAP73-201ENST00000614820 330 ntBASIC4.61□□□□□ -1.67
HIF3AQ9Y2N7 MIR6837-201ENST00000620884 64 ntBASIC4.61□□□□□ -1.67
HIF3AQ9Y2N7 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.61□□□□□ -1.67
HIF3AQ9Y2N7 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.61□□□□□ -1.67
HIF3AQ9Y2N7 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HIF3AQ9Y2N7 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HIF3AQ9Y2N7 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
HIF3AQ9Y2N7 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.61□□□□□ -1.67
HIF3AQ9Y2N7 AL391684.1-202ENST00000641293 1636 ntBASIC4.61□□□□□ -1.67
HIF3AQ9Y2N7 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HIF3AQ9Y2N7 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HIF3AQ9Y2N7 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.6□□□□□ -1.67
HIF3AQ9Y2N7 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HIF3AQ9Y2N7 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
HIF3AQ9Y2N7 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.6□□□□□ -1.67
HIF3AQ9Y2N7 AC063976.2-201ENST00000425667 3556 ntBASIC4.6□□□□□ -1.67
HIF3AQ9Y2N7 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HIF3AQ9Y2N7 SNORD113-8-201ENST00000363497 74 ntBASIC4.6□□□□□ -1.67
HIF3AQ9Y2N7 RNA5SP242-201ENST00000364171 118 ntBASIC4.6□□□□□ -1.67
HIF3AQ9Y2N7 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
HIF3AQ9Y2N7 Y_RNA.581-201ENST00000391017 97 ntBASIC4.6□□□□□ -1.67
HIF3AQ9Y2N7 RPL21P75-201ENST00000396599 483 ntBASIC4.6□□□□□ -1.67
HIF3AQ9Y2N7 RPL21P28-201ENST00000401418 483 ntBASIC4.6□□□□□ -1.67
HIF3AQ9Y2N7 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.6□□□□□ -1.67
HIF3AQ9Y2N7 AC016769.2-201ENST00000414815 475 ntBASIC4.6□□□□□ -1.67
HIF3AQ9Y2N7 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 137.7 ms