Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 RPL35AP22-201ENST00000436855 335 ntBASIC2.33□□□□□ -2.04
TRAPPC4Q9Y296 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC2.33□□□□□ -2.04
TRAPPC4Q9Y296 TPT1P14-201ENST00000448018 505 ntBASIC2.33□□□□□ -2.04
TRAPPC4Q9Y296 OR6C5P-201ENST00000452388 923 ntBASIC2.33□□□□□ -2.04
TRAPPC4Q9Y296 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC2.33□□□□□ -2.04
TRAPPC4Q9Y296 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.33□□□□□ -2.04
TRAPPC4Q9Y296 AC100870.1-201ENST00000522035 505 ntBASIC2.33□□□□□ -2.04
TRAPPC4Q9Y296 AP000867.2-201ENST00000532468 320 ntBASIC2.33□□□□□ -2.04
TRAPPC4Q9Y296 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC2.33□□□□□ -2.04
TRAPPC4Q9Y296 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.33□□□□□ -2.04
TRAPPC4Q9Y296 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.33□□□□□ -2.04
TRAPPC4Q9Y296 AC060771.1-201ENST00000582031 164 ntBASIC2.33□□□□□ -2.04
TRAPPC4Q9Y296 AC008739.2-201ENST00000597006 317 ntBASIC2.33□□□□□ -2.04
TRAPPC4Q9Y296 AC112187.2-201ENST00000604345 283 ntBASIC2.33□□□□□ -2.04
TRAPPC4Q9Y296 AP002791.1-201ENST00000623291 381 ntBASIC2.33□□□□□ -2.04
TRAPPC4Q9Y296 AC019226.1-201ENST00000625666 515 ntBASIC2.33□□□□□ -2.04
TRAPPC4Q9Y296 AC099063.3-201ENST00000642066 185 ntBASIC2.33□□□□□ -2.04
TRAPPC4Q9Y296 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.33□□□□□ -2.04
TRAPPC4Q9Y296 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.33□□□□□ -2.04
TRAPPC4Q9Y296 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
TRAPPC4Q9Y296 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
TRAPPC4Q9Y296 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
TRAPPC4Q9Y296 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.33□□□□□ -2.04
TRAPPC4Q9Y296 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
TRAPPC4Q9Y296 AL138713.1-201ENST00000624026 2130 ntBASIC2.32□□□□□ -2.04
TRAPPC4Q9Y296 AC062016.1-201ENST00000355719 319 ntBASIC2.32□□□□□ -2.04
TRAPPC4Q9Y296 SNORA5B-201ENST00000363786 132 ntBASIC2.32□□□□□ -2.04
TRAPPC4Q9Y296 SNORA23-201ENST00000365128 182 ntBASIC2.32□□□□□ -2.04
TRAPPC4Q9Y296 RNU6-253P-201ENST00000384730 105 ntBASIC2.32□□□□□ -2.04
TRAPPC4Q9Y296 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.32□□□□□ -2.04
TRAPPC4Q9Y296 NUP35P1-201ENST00000422734 947 ntBASIC2.32□□□□□ -2.04
TRAPPC4Q9Y296 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.32□□□□□ -2.04
TRAPPC4Q9Y296 AC008850.1-201ENST00000427546 362 ntBASIC2.32□□□□□ -2.04
TRAPPC4Q9Y296 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.32□□□□□ -2.04
TRAPPC4Q9Y296 LARP1BP3-201ENST00000437229 869 ntBASIC2.32□□□□□ -2.04
TRAPPC4Q9Y296 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.32□□□□□ -2.04
TRAPPC4Q9Y296 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.32□□□□□ -2.04
TRAPPC4Q9Y296 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.32□□□□□ -2.04
TRAPPC4Q9Y296 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.32□□□□□ -2.04
TRAPPC4Q9Y296 SNRPGP6-201ENST00000451124 220 ntBASIC2.32□□□□□ -2.04
TRAPPC4Q9Y296 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC2.32□□□□□ -2.04
TRAPPC4Q9Y296 CACYBPP2-201ENST00000453625 678 ntBASIC2.32□□□□□ -2.04
TRAPPC4Q9Y296 ATG12P2-201ENST00000456830 416 ntBASIC2.32□□□□□ -2.04
TRAPPC4Q9Y296 AP1S2P1-201ENST00000457344 379 ntBASIC2.32□□□□□ -2.04
TRAPPC4Q9Y296 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.32□□□□□ -2.04
TRAPPC4Q9Y296 AC135721.1-201ENST00000497954 479 ntBASIC2.32□□□□□ -2.04
TRAPPC4Q9Y296 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC2.32□□□□□ -2.04
TRAPPC4Q9Y296 RNU6-1129P-201ENST00000515964 104 ntBASIC2.32□□□□□ -2.04
TRAPPC4Q9Y296 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC2.32□□□□□ -2.04
TRAPPC4Q9Y296 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.32□□□□□ -2.04
TRAPPC4Q9Y296 AC013828.2-201ENST00000532487 235 ntBASIC2.32□□□□□ -2.04
TRAPPC4Q9Y296 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.32□□□□□ -2.04
TRAPPC4Q9Y296 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
TRAPPC4Q9Y296 AC243972.3-201ENST00000539655 198 ntBASIC2.32□□□□□ -2.04
TRAPPC4Q9Y296 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC2.32□□□□□ -2.04
TRAPPC4Q9Y296 ELOCP32-201ENST00000548625 324 ntBASIC2.32□□□□□ -2.04
TRAPPC4Q9Y296 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC2.32□□□□□ -2.04
TRAPPC4Q9Y296 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.32□□□□□ -2.04
TRAPPC4Q9Y296 AP001004.1-201ENST00000582468 324 ntBASIC2.32□□□□□ -2.04
TRAPPC4Q9Y296 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.32□□□□□ -2.04
TRAPPC4Q9Y296 BNIP3P23-201ENST00000599655 511 ntBASIC2.32□□□□□ -2.04
TRAPPC4Q9Y296 AC093838.1-201ENST00000613014 469 ntBASIC2.32□□□□□ -2.04
TRAPPC4Q9Y296 TUG1_2.1-201ENST00000614234 87 ntBASIC2.32□□□□□ -2.04
TRAPPC4Q9Y296 AC013476.2-201ENST00000614456 459 ntBASIC2.32□□□□□ -2.04
TRAPPC4Q9Y296 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC2.32□□□□□ -2.04
TRAPPC4Q9Y296 AC012150.2-201ENST00000621300 544 ntBASIC2.32□□□□□ -2.04
TRAPPC4Q9Y296 AP000676.3-201ENST00000623299 569 ntBASIC2.32□□□□□ -2.04
TRAPPC4Q9Y296 AC017037.3-201ENST00000625016 472 ntBASIC2.32□□□□□ -2.04
TRAPPC4Q9Y296 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.32□□□□□ -2.04
TRAPPC4Q9Y296 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.32□□□□□ -2.04
TRAPPC4Q9Y296 AC110079.1-202ENST00000635213 138 ntBASIC2.32□□□□□ -2.04
TRAPPC4Q9Y296 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
TRAPPC4Q9Y296 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
TRAPPC4Q9Y296 CCT4P2-201ENST00000233836 1548 ntBASIC2.32□□□□□ -2.04
TRAPPC4Q9Y296 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.31□□□□□ -2.04
TRAPPC4Q9Y296 OR4G2P-202ENST00000641004 1759 ntBASIC2.31□□□□□ -2.04
TRAPPC4Q9Y296 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
TRAPPC4Q9Y296 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
TRAPPC4Q9Y296 SNORD62.1-201ENST00000362541 86 ntBASIC2.31□□□□□ -2.04
TRAPPC4Q9Y296 RNU6-223P-201ENST00000362830 107 ntBASIC2.31□□□□□ -2.04
TRAPPC4Q9Y296 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
TRAPPC4Q9Y296 RNU6-432P-201ENST00000384196 109 ntBASIC2.31□□□□□ -2.04
TRAPPC4Q9Y296 MIR34A-201ENST00000385130 110 ntBASIC2.31□□□□□ -2.04
TRAPPC4Q9Y296 RNU2-52P-201ENST00000410680 190 ntBASIC2.31□□□□□ -2.04
TRAPPC4Q9Y296 RNU2-25P-201ENST00000411041 191 ntBASIC2.31□□□□□ -2.04
TRAPPC4Q9Y296 HMGB1P11-201ENST00000413899 637 ntBASIC2.31□□□□□ -2.04
TRAPPC4Q9Y296 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC2.31□□□□□ -2.04
TRAPPC4Q9Y296 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.31□□□□□ -2.04
TRAPPC4Q9Y296 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.31□□□□□ -2.04
TRAPPC4Q9Y296 AC009237.8-201ENST00000445492 379 ntBASIC2.31□□□□□ -2.04
TRAPPC4Q9Y296 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.31□□□□□ -2.04
TRAPPC4Q9Y296 AL049874.1-201ENST00000489560 388 ntBASIC2.31□□□□□ -2.04
TRAPPC4Q9Y296 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.31□□□□□ -2.04
TRAPPC4Q9Y296 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC2.31□□□□□ -2.04
TRAPPC4Q9Y296 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.31□□□□□ -2.04
TRAPPC4Q9Y296 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.31□□□□□ -2.04
TRAPPC4Q9Y296 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.31□□□□□ -2.04
TRAPPC4Q9Y296 HMGN1P28-201ENST00000521340 364 ntBASIC2.31□□□□□ -2.04
TRAPPC4Q9Y296 AC087241.2-201ENST00000535801 324 ntBASIC2.31□□□□□ -2.04
TRAPPC4Q9Y296 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms