Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 CUL1P1-201ENST00000509510 2425 ntBASIC5.2□□□□□ -1.58
CDK11AQ9UQ88 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CDK11AQ9UQ88 USP33-201ENST00000357428 4155 ntTSL 5 BASIC5.2□□□□□ -1.58
CDK11AQ9UQ88 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC5.19□□□□□ -1.58
CDK11AQ9UQ88 IDE-202ENST00000371581 4480 ntTSL 2 BASIC5.19□□□□□ -1.58
CDK11AQ9UQ88 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC5.19□□□□□ -1.58
CDK11AQ9UQ88 RNU6-223P-201ENST00000362830 107 ntBASIC5.19□□□□□ -1.58
CDK11AQ9UQ88 PARD3-204ENST00000374768 799 ntTSL 3 BASIC5.19□□□□□ -1.58
CDK11AQ9UQ88 RNU6-1103P-201ENST00000384150 107 ntBASIC5.19□□□□□ -1.58
CDK11AQ9UQ88 MIR493-201ENST00000385254 89 ntBASIC5.19□□□□□ -1.58
CDK11AQ9UQ88 RNU6-754P-201ENST00000391166 107 ntBASIC5.19□□□□□ -1.58
CDK11AQ9UQ88 FAT1P1-201ENST00000406588 507 ntBASIC5.19□□□□□ -1.58
CDK11AQ9UQ88 RNU4-55P-201ENST00000410731 137 ntBASIC5.19□□□□□ -1.58
CDK11AQ9UQ88 AC063979.1-201ENST00000415539 377 ntBASIC5.19□□□□□ -1.58
CDK11AQ9UQ88 AL451074.3-201ENST00000437709 472 ntBASIC5.19□□□□□ -1.58
CDK11AQ9UQ88 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC5.19□□□□□ -1.58
CDK11AQ9UQ88 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC5.19□□□□□ -1.58
CDK11AQ9UQ88 HMGN2P13-201ENST00000476476 274 ntBASIC5.19□□□□□ -1.58
CDK11AQ9UQ88 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CDK11AQ9UQ88 AC023194.1-201ENST00000493084 308 ntBASIC5.19□□□□□ -1.58
CDK11AQ9UQ88 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC5.19□□□□□ -1.58
CDK11AQ9UQ88 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC5.19□□□□□ -1.58
CDK11AQ9UQ88 AC011979.2-201ENST00000527568 352 ntBASIC5.19□□□□□ -1.58
CDK11AQ9UQ88 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC5.19□□□□□ -1.58
CDK11AQ9UQ88 AL133271.1-201ENST00000538229 291 ntBASIC5.19□□□□□ -1.58
CDK11AQ9UQ88 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC5.19□□□□□ -1.58
CDK11AQ9UQ88 MIR3921-201ENST00000577308 85 ntBASIC5.19□□□□□ -1.58
CDK11AQ9UQ88 AL451007.1-201ENST00000595491 289 ntBASIC5.19□□□□□ -1.58
CDK11AQ9UQ88 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC5.19□□□□□ -1.58
CDK11AQ9UQ88 AL603758.1-201ENST00000618654 241 ntBASIC5.19□□□□□ -1.58
CDK11AQ9UQ88 MIR6130-201ENST00000619419 109 ntBASIC5.19□□□□□ -1.58
CDK11AQ9UQ88 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC5.19□□□□□ -1.58
CDK11AQ9UQ88 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CDK11AQ9UQ88 DEFB108F-201ENST00000344638 222 ntBASIC5.18□□□□□ -1.58
CDK11AQ9UQ88 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CDK11AQ9UQ88 RNU4-1-201ENST00000363925 141 ntBASIC5.18□□□□□ -1.58
CDK11AQ9UQ88 RNY3P13-201ENST00000365542 102 ntBASIC5.18□□□□□ -1.58
CDK11AQ9UQ88 MTCO3P40-201ENST00000392516 676 ntBASIC5.18□□□□□ -1.58
CDK11AQ9UQ88 RPS3AP24-201ENST00000407896 734 ntBASIC5.18□□□□□ -1.58
CDK11AQ9UQ88 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC5.18□□□□□ -1.58
CDK11AQ9UQ88 Z99755.1-201ENST00000414048 380 ntBASIC5.18□□□□□ -1.58
CDK11AQ9UQ88 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC5.18□□□□□ -1.58
CDK11AQ9UQ88 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
CDK11AQ9UQ88 AC002486.1-201ENST00000435098 391 ntBASIC5.18□□□□□ -1.58
CDK11AQ9UQ88 AL357552.1-201ENST00000445254 415 ntBASIC5.18□□□□□ -1.58
CDK11AQ9UQ88 AC132479.1-201ENST00000449160 144 ntBASIC5.18□□□□□ -1.58
CDK11AQ9UQ88 RNA5SP310-201ENST00000459084 116 ntBASIC5.18□□□□□ -1.58
CDK11AQ9UQ88 SNORA70.16-201ENST00000516390 95 ntBASIC5.18□□□□□ -1.58
CDK11AQ9UQ88 DEFB108D-201ENST00000527787 222 ntBASIC5.18□□□□□ -1.58
CDK11AQ9UQ88 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC5.18□□□□□ -1.58
CDK11AQ9UQ88 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC5.18□□□□□ -1.58
CDK11AQ9UQ88 AP001429.1-201ENST00000602568 530 ntBASIC5.18□□□□□ -1.58
CDK11AQ9UQ88 AF250324.2-201ENST00000608299 610 ntBASIC5.18□□□□□ -1.58
CDK11AQ9UQ88 AC093838.1-201ENST00000613014 469 ntBASIC5.18□□□□□ -1.58
CDK11AQ9UQ88 MIR6852-201ENST00000621699 66 ntBASIC5.18□□□□□ -1.58
CDK11AQ9UQ88 AC006111.3-201ENST00000622137 383 ntBASIC5.18□□□□□ -1.58
CDK11AQ9UQ88 LRRC77P-213ENST00000637727 880 ntBASIC5.18□□□□□ -1.58
CDK11AQ9UQ88 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
CDK11AQ9UQ88 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC5.18□□□□□ -1.58
CDK11AQ9UQ88 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CDK11AQ9UQ88 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CDK11AQ9UQ88 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CDK11AQ9UQ88 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
CDK11AQ9UQ88 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CDK11AQ9UQ88 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CDK11AQ9UQ88 ANKRD36BP1-202ENST00000604892 1417 ntBASIC5.17□□□□□ -1.58
CDK11AQ9UQ88 MIR422A-201ENST00000362286 90 ntBASIC5.17□□□□□ -1.58
CDK11AQ9UQ88 Y_RNA.500-201ENST00000384466 111 ntBASIC5.17□□□□□ -1.58
CDK11AQ9UQ88 RNU1-101P-201ENST00000391171 127 ntBASIC5.17□□□□□ -1.58
CDK11AQ9UQ88 FGFR1OP2P1-201ENST00000395943 500 ntBASIC5.17□□□□□ -1.58
CDK11AQ9UQ88 MIR1290-201ENST00000408735 78 ntBASIC5.17□□□□□ -1.58
CDK11AQ9UQ88 RNU6-1077P-201ENST00000410506 102 ntBASIC5.17□□□□□ -1.58
CDK11AQ9UQ88 RPL30P2-201ENST00000414021 291 ntBASIC5.17□□□□□ -1.58
CDK11AQ9UQ88 MTATP6P4-201ENST00000427725 675 ntBASIC5.17□□□□□ -1.58
CDK11AQ9UQ88 RN7SL330P-201ENST00000469709 307 ntBASIC5.17□□□□□ -1.58
CDK11AQ9UQ88 RPS3AP50-201ENST00000487064 803 ntBASIC5.17□□□□□ -1.58
CDK11AQ9UQ88 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC5.17□□□□□ -1.58
CDK11AQ9UQ88 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC5.17□□□□□ -1.58
CDK11AQ9UQ88 AC026801.2-201ENST00000515352 425 ntBASIC5.17□□□□□ -1.58
CDK11AQ9UQ88 RNA5SP337-201ENST00000517007 109 ntBASIC5.17□□□□□ -1.58
CDK11AQ9UQ88 RNU6-711P-201ENST00000517255 106 ntBASIC5.17□□□□□ -1.58
CDK11AQ9UQ88 AP001893.2-201ENST00000526949 202 ntBASIC5.17□□□□□ -1.58
CDK11AQ9UQ88 FAM92A1P1-201ENST00000528023 890 ntBASIC5.17□□□□□ -1.58
CDK11AQ9UQ88 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC5.17□□□□□ -1.58
CDK11AQ9UQ88 AL133153.1-201ENST00000557756 303 ntBASIC5.17□□□□□ -1.58
CDK11AQ9UQ88 MIR3167-201ENST00000579623 85 ntBASIC5.17□□□□□ -1.58
CDK11AQ9UQ88 MIR4801-201ENST00000582704 82 ntBASIC5.17□□□□□ -1.58
CDK11AQ9UQ88 AL162713.1-201ENST00000604480 262 ntBASIC5.17□□□□□ -1.58
CDK11AQ9UQ88 AC090517.2-201ENST00000614966 680 ntBASIC5.17□□□□□ -1.58
CDK11AQ9UQ88 MIR6076-201ENST00000617521 113 ntBASIC5.17□□□□□ -1.58
CDK11AQ9UQ88 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC5.17□□□□□ -1.58
CDK11AQ9UQ88 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CDK11AQ9UQ88 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CDK11AQ9UQ88 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CDK11AQ9UQ88 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC5.17□□□□□ -1.58
CDK11AQ9UQ88 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CDK11AQ9UQ88 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC5.16□□□□□ -1.58
CDK11AQ9UQ88 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC5.16□□□□□ -1.58
CDK11AQ9UQ88 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC5.16□□□□□ -1.58
CDK11AQ9UQ88 RNU6-181P-201ENST00000363225 107 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms