Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 AL445529.1-201ENST00000398713 389 ntBASIC4.78□□□□□ -1.64
AP4E1Q9UPM8 MIR921-201ENST00000401133 56 ntBASIC4.78□□□□□ -1.64
AP4E1Q9UPM8 MIR298-201ENST00000401212 88 ntBASIC4.78□□□□□ -1.64
AP4E1Q9UPM8 MIR548M-201ENST00000408260 86 ntBASIC4.78□□□□□ -1.64
AP4E1Q9UPM8 UBE2D3P2-201ENST00000424409 445 ntBASIC4.78□□□□□ -1.64
AP4E1Q9UPM8 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.78□□□□□ -1.64
AP4E1Q9UPM8 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC4.78□□□□□ -1.64
AP4E1Q9UPM8 RPS3AP46-201ENST00000448352 682 ntBASIC4.78□□□□□ -1.64
AP4E1Q9UPM8 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC4.78□□□□□ -1.64
AP4E1Q9UPM8 ISCUP1-201ENST00000454451 448 ntBASIC4.78□□□□□ -1.64
AP4E1Q9UPM8 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC4.78□□□□□ -1.64
AP4E1Q9UPM8 SCARNA10-201ENST00000459255 330 ntBASIC4.78□□□□□ -1.64
AP4E1Q9UPM8 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
AP4E1Q9UPM8 AC113155.1-201ENST00000511141 769 ntBASIC4.78□□□□□ -1.64
AP4E1Q9UPM8 AC007016.1-201ENST00000512110 244 ntBASIC4.78□□□□□ -1.64
AP4E1Q9UPM8 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC4.78□□□□□ -1.64
AP4E1Q9UPM8 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC4.78□□□□□ -1.64
AP4E1Q9UPM8 IGKV1-32-201ENST00000519290 311 ntBASIC4.78□□□□□ -1.64
AP4E1Q9UPM8 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.78□□□□□ -1.64
AP4E1Q9UPM8 OR4H12P-201ENST00000556269 907 ntBASIC4.78□□□□□ -1.64
AP4E1Q9UPM8 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.78□□□□□ -1.64
AP4E1Q9UPM8 MIR5692A1-201ENST00000580523 69 ntBASIC4.78□□□□□ -1.64
AP4E1Q9UPM8 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC4.78□□□□□ -1.64
AP4E1Q9UPM8 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.78□□□□□ -1.64
AP4E1Q9UPM8 AC006023.2-201ENST00000609916 167 ntBASIC4.78□□□□□ -1.64
AP4E1Q9UPM8 Mico1.1-201ENST00000611698 204 ntBASIC4.78□□□□□ -1.64
AP4E1Q9UPM8 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.78□□□□□ -1.64
AP4E1Q9UPM8 AC130454.1-201ENST00000622948 401 ntBASIC4.78□□□□□ -1.64
AP4E1Q9UPM8 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.78□□□□□ -1.64
AP4E1Q9UPM8 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
AP4E1Q9UPM8 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
AP4E1Q9UPM8 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.78□□□□□ -1.64
AP4E1Q9UPM8 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
AP4E1Q9UPM8 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
AP4E1Q9UPM8 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.78□□□□□ -1.65
AP4E1Q9UPM8 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.77□□□□□ -1.65
AP4E1Q9UPM8 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
AP4E1Q9UPM8 RNU4-50P-201ENST00000364361 141 ntBASIC4.77□□□□□ -1.65
AP4E1Q9UPM8 Y_RNA.478-201ENST00000384358 107 ntBASIC4.77□□□□□ -1.65
AP4E1Q9UPM8 SNORA51.11-201ENST00000384442 131 ntBASIC4.77□□□□□ -1.65
AP4E1Q9UPM8 Y_RNA.555-201ENST00000384673 110 ntBASIC4.77□□□□□ -1.65
AP4E1Q9UPM8 SNORD96B-201ENST00000386148 79 ntBASIC4.77□□□□□ -1.65
AP4E1Q9UPM8 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
AP4E1Q9UPM8 AL133270.1-201ENST00000402635 279 ntBASIC4.77□□□□□ -1.65
AP4E1Q9UPM8 RNU6-607P-201ENST00000411283 108 ntBASIC4.77□□□□□ -1.65
AP4E1Q9UPM8 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.77□□□□□ -1.65
AP4E1Q9UPM8 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.77□□□□□ -1.65
AP4E1Q9UPM8 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.77□□□□□ -1.65
AP4E1Q9UPM8 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.77□□□□□ -1.65
AP4E1Q9UPM8 AC110792.1-201ENST00000491826 472 ntBASIC4.77□□□□□ -1.65
AP4E1Q9UPM8 RNU6-397P-201ENST00000516226 104 ntBASIC4.77□□□□□ -1.65
AP4E1Q9UPM8 Y_RNA.687-201ENST00000516558 91 ntBASIC4.77□□□□□ -1.65
AP4E1Q9UPM8 RNU6-914P-201ENST00000516749 109 ntBASIC4.77□□□□□ -1.65
AP4E1Q9UPM8 SNORA40.15-201ENST00000516884 107 ntBASIC4.77□□□□□ -1.65
AP4E1Q9UPM8 RNU6-897P-201ENST00000517135 105 ntBASIC4.77□□□□□ -1.65
AP4E1Q9UPM8 RNU6-111P-201ENST00000517179 105 ntBASIC4.77□□□□□ -1.65
AP4E1Q9UPM8 AC109329.1-201ENST00000518744 317 ntBASIC4.77□□□□□ -1.65
AP4E1Q9UPM8 RRN3P3-201ENST00000549207 578 ntBASIC4.77□□□□□ -1.65
AP4E1Q9UPM8 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC4.77□□□□□ -1.65
AP4E1Q9UPM8 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.77□□□□□ -1.65
AP4E1Q9UPM8 MIR4270-201ENST00000581799 70 ntBASIC4.77□□□□□ -1.65
AP4E1Q9UPM8 AC012433.1-201ENST00000588916 398 ntBASIC4.77□□□□□ -1.65
AP4E1Q9UPM8 HMGB2P1-201ENST00000591146 634 ntBASIC4.77□□□□□ -1.65
AP4E1Q9UPM8 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.77□□□□□ -1.65
AP4E1Q9UPM8 AL159153.1-201ENST00000619688 317 ntBASIC4.77□□□□□ -1.65
AP4E1Q9UPM8 AL512643.1-201ENST00000635735 524 ntBASIC4.77□□□□□ -1.65
AP4E1Q9UPM8 MIR4496-201ENST00000635896 61 ntBASIC4.77□□□□□ -1.65
AP4E1Q9UPM8 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC4.77□□□□□ -1.65
AP4E1Q9UPM8 AL596275.2-204ENST00000641628 552 ntBASIC4.77□□□□□ -1.65
AP4E1Q9UPM8 AL596275.2-206ENST00000641957 626 ntBASIC4.77□□□□□ -1.65
AP4E1Q9UPM8 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
AP4E1Q9UPM8 MAPK10-303ENST00000641324 3959 ntBASIC4.77□□□□□ -1.65
AP4E1Q9UPM8 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.77□□□□□ -1.65
AP4E1Q9UPM8 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
AP4E1Q9UPM8 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
AP4E1Q9UPM8 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
AP4E1Q9UPM8 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
AP4E1Q9UPM8 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
AP4E1Q9UPM8 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
AP4E1Q9UPM8 MTND5P6-201ENST00000422338 1798 ntBASIC4.76□□□□□ -1.65
AP4E1Q9UPM8 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
AP4E1Q9UPM8 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
AP4E1Q9UPM8 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.76□□□□□ -1.65
AP4E1Q9UPM8 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
AP4E1Q9UPM8 MAPK10-286ENST00000641208 8747 ntBASIC4.76□□□□□ -1.65
AP4E1Q9UPM8 RN7SKP103-201ENST00000363848 320 ntBASIC4.76□□□□□ -1.65
AP4E1Q9UPM8 Y_RNA.785-201ENST00000384290 109 ntBASIC4.76□□□□□ -1.65
AP4E1Q9UPM8 RNU6-790P-201ENST00000384479 105 ntBASIC4.76□□□□□ -1.65
AP4E1Q9UPM8 Y_RNA.534-201ENST00000384599 112 ntBASIC4.76□□□□□ -1.65
AP4E1Q9UPM8 RNU2-43P-201ENST00000410306 190 ntBASIC4.76□□□□□ -1.65
AP4E1Q9UPM8 RNU6-325P-201ENST00000411132 105 ntBASIC4.76□□□□□ -1.65
AP4E1Q9UPM8 CYCSP33-201ENST00000414485 327 ntBASIC4.76□□□□□ -1.65
AP4E1Q9UPM8 RAC1P3-201ENST00000416129 580 ntBASIC4.76□□□□□ -1.65
AP4E1Q9UPM8 BX842559.1-201ENST00000419615 532 ntBASIC4.76□□□□□ -1.65
AP4E1Q9UPM8 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.76□□□□□ -1.65
AP4E1Q9UPM8 AC006946.1-201ENST00000429106 328 ntBASIC4.76□□□□□ -1.65
AP4E1Q9UPM8 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.76□□□□□ -1.65
AP4E1Q9UPM8 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.76□□□□□ -1.65
AP4E1Q9UPM8 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC4.76□□□□□ -1.65
AP4E1Q9UPM8 AC006466.1-201ENST00000438721 289 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms