Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.92□□□□□ -1.78
COL20A1Q9P218 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.92□□□□□ -1.78
COL20A1Q9P218 MTND1P2-201ENST00000430604 821 ntBASIC3.92□□□□□ -1.78
COL20A1Q9P218 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.92□□□□□ -1.78
COL20A1Q9P218 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.92□□□□□ -1.78
COL20A1Q9P218 RPL7P28-201ENST00000437739 740 ntBASIC3.92□□□□□ -1.78
COL20A1Q9P218 SEPT14P3-201ENST00000439401 183 ntBASIC3.92□□□□□ -1.78
COL20A1Q9P218 TXNP1-201ENST00000441872 371 ntBASIC3.92□□□□□ -1.78
COL20A1Q9P218 AL732372.2-207ENST00000445840 183 ntBASIC3.92□□□□□ -1.78
COL20A1Q9P218 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.92□□□□□ -1.78
COL20A1Q9P218 FDX1P2-201ENST00000450769 375 ntBASIC3.92□□□□□ -1.78
COL20A1Q9P218 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.92□□□□□ -1.78
COL20A1Q9P218 SEPT14P2-201ENST00000453405 183 ntBASIC3.92□□□□□ -1.78
COL20A1Q9P218 MRPS17P3-201ENST00000465453 385 ntBASIC3.92□□□□□ -1.78
COL20A1Q9P218 AC006512.1-201ENST00000468816 291 ntBASIC3.92□□□□□ -1.78
COL20A1Q9P218 SEPT14P4-201ENST00000513445 186 ntBASIC3.92□□□□□ -1.78
COL20A1Q9P218 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.92□□□□□ -1.78
COL20A1Q9P218 SNORA40.12-201ENST00000516329 111 ntBASIC3.92□□□□□ -1.78
COL20A1Q9P218 MIR2114-201ENST00000516645 80 ntBASIC3.92□□□□□ -1.78
COL20A1Q9P218 SNORA70.24-201ENST00000517233 118 ntBASIC3.92□□□□□ -1.78
COL20A1Q9P218 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.92□□□□□ -1.78
COL20A1Q9P218 FO082796.1-201ENST00000523795 183 ntBASIC3.92□□□□□ -1.78
COL20A1Q9P218 MTND1P35-201ENST00000526739 508 ntBASIC3.92□□□□□ -1.78
COL20A1Q9P218 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.92□□□□□ -1.78
COL20A1Q9P218 AC026333.2-201ENST00000542164 106 ntBASIC3.92□□□□□ -1.78
COL20A1Q9P218 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.92□□□□□ -1.78
COL20A1Q9P218 MIR3690-201ENST00000580266 75 ntBASIC3.92□□□□□ -1.78
COL20A1Q9P218 AC104763.2-201ENST00000604179 382 ntBASIC3.92□□□□□ -1.78
COL20A1Q9P218 MIR7112-201ENST00000616126 65 ntBASIC3.92□□□□□ -1.78
COL20A1Q9P218 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.92□□□□□ -1.78
COL20A1Q9P218 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.92□□□□□ -1.78
COL20A1Q9P218 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
COL20A1Q9P218 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
COL20A1Q9P218 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
COL20A1Q9P218 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.91□□□□□ -1.78
COL20A1Q9P218 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.91□□□□□ -1.78
COL20A1Q9P218 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
COL20A1Q9P218 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC3.91□□□□□ -1.78
COL20A1Q9P218 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
COL20A1Q9P218 AL391417.1-201ENST00000404100 426 ntBASIC3.91□□□□□ -1.78
COL20A1Q9P218 RNA5SP129-201ENST00000410276 118 ntBASIC3.91□□□□□ -1.78
COL20A1Q9P218 RN7SKP111-201ENST00000410349 271 ntBASIC3.91□□□□□ -1.78
COL20A1Q9P218 AL513331.1-201ENST00000411908 397 ntBASIC3.91□□□□□ -1.78
COL20A1Q9P218 SDCBPP3-201ENST00000419629 891 ntBASIC3.91□□□□□ -1.78
COL20A1Q9P218 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC3.91□□□□□ -1.78
COL20A1Q9P218 AL590383.1-201ENST00000428602 75 ntBASIC3.91□□□□□ -1.78
COL20A1Q9P218 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.91□□□□□ -1.78
COL20A1Q9P218 HMGB1P27-201ENST00000431429 603 ntBASIC3.91□□□□□ -1.78
COL20A1Q9P218 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.91□□□□□ -1.78
COL20A1Q9P218 NEFMP1-201ENST00000443423 1006 ntBASIC3.91□□□□□ -1.78
COL20A1Q9P218 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.91□□□□□ -1.78
COL20A1Q9P218 RNU6-420P-201ENST00000458780 107 ntBASIC3.91□□□□□ -1.78
COL20A1Q9P218 RNU6-953P-201ENST00000459154 107 ntBASIC3.91□□□□□ -1.78
COL20A1Q9P218 AC078785.3-201ENST00000476607 425 ntBASIC3.91□□□□□ -1.78
COL20A1Q9P218 AL049874.1-201ENST00000489560 388 ntBASIC3.91□□□□□ -1.78
COL20A1Q9P218 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.91□□□□□ -1.78
COL20A1Q9P218 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.91□□□□□ -1.78
COL20A1Q9P218 SNORA74D-201ENST00000516404 141 ntBASIC3.91□□□□□ -1.78
COL20A1Q9P218 AC011611.1-201ENST00000552179 197 ntBASIC3.91□□□□□ -1.78
COL20A1Q9P218 AC005476.1-201ENST00000554427 397 ntBASIC3.91□□□□□ -1.78
COL20A1Q9P218 CKAP2P1-201ENST00000555477 2049 ntBASIC3.91□□□□□ -1.78
COL20A1Q9P218 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.91□□□□□ -1.78
COL20A1Q9P218 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.91□□□□□ -1.78
COL20A1Q9P218 NRBF2P5-201ENST00000603087 788 ntBASIC3.91□□□□□ -1.78
COL20A1Q9P218 AC093648.1-201ENST00000623546 606 ntBASIC3.91□□□□□ -1.78
COL20A1Q9P218 FER-210ENST00000628534 558 ntTSL 5 BASIC3.91□□□□□ -1.78
COL20A1Q9P218 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.91□□□□□ -1.78
COL20A1Q9P218 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
COL20A1Q9P218 AC068647.1-201ENST00000489539 2265 ntBASIC3.91□□□□□ -1.78
COL20A1Q9P218 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.91□□□□□ -1.78
COL20A1Q9P218 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.91□□□□□ -1.78
COL20A1Q9P218 MFSD8-233ENST00000641482 4860 ntBASIC3.9□□□□□ -1.78
COL20A1Q9P218 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
COL20A1Q9P218 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.9□□□□□ -1.78
COL20A1Q9P218 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
COL20A1Q9P218 RNU6-1090P-201ENST00000364065 94 ntBASIC3.9□□□□□ -1.79
COL20A1Q9P218 SNORA62.1-201ENST00000364287 154 ntBASIC3.9□□□□□ -1.79
COL20A1Q9P218 SMIM11P1-201ENST00000369586 178 ntBASIC3.9□□□□□ -1.79
COL20A1Q9P218 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.9□□□□□ -1.79
COL20A1Q9P218 RNU6-877P-201ENST00000383868 107 ntBASIC3.9□□□□□ -1.79
COL20A1Q9P218 RNU6-946P-201ENST00000383878 107 ntBASIC3.9□□□□□ -1.79
COL20A1Q9P218 AC068050.1-201ENST00000394891 380 ntBASIC3.9□□□□□ -1.79
COL20A1Q9P218 AMD1P2-201ENST00000412936 992 ntBASIC3.9□□□□□ -1.79
COL20A1Q9P218 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
COL20A1Q9P218 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.9□□□□□ -1.79
COL20A1Q9P218 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.9□□□□□ -1.79
COL20A1Q9P218 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.9□□□□□ -1.79
COL20A1Q9P218 AL451054.2-201ENST00000420896 202 ntBASIC3.9□□□□□ -1.79
COL20A1Q9P218 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC3.9□□□□□ -1.79
COL20A1Q9P218 RBMX2P4-201ENST00000441256 376 ntBASIC3.9□□□□□ -1.79
COL20A1Q9P218 AC016691.1-201ENST00000441321 413 ntBASIC3.9□□□□□ -1.79
COL20A1Q9P218 CALM1P1-201ENST00000442082 433 ntBASIC3.9□□□□□ -1.79
COL20A1Q9P218 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.9□□□□□ -1.79
COL20A1Q9P218 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.9□□□□□ -1.79
COL20A1Q9P218 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.9□□□□□ -1.79
COL20A1Q9P218 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.9□□□□□ -1.79
COL20A1Q9P218 PRDX4P1-201ENST00000507189 574 ntBASIC3.9□□□□□ -1.79
COL20A1Q9P218 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3.9□□□□□ -1.79
COL20A1Q9P218 SCARNA15.2-201ENST00000516409 127 ntBASIC3.9□□□□□ -1.79
COL20A1Q9P218 NRON-201ENST00000517270 370 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms