Protein–RNA interactions for Protein: Q9NY93

DDX56, Probable ATP-dependent RNA helicase DDX56, humanhuman

Known RBP Predictions only

Length 547 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56Q9NY93 RNU6-1025P-201ENST00000410629 104 ntBASIC4.1□□□□□ -1.75
DDX56Q9NY93 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC4.1□□□□□ -1.75
DDX56Q9NY93 USP9YP27-201ENST00000418455 438 ntBASIC4.1□□□□□ -1.75
DDX56Q9NY93 USP9YP18-201ENST00000425912 695 ntBASIC4.1□□□□□ -1.75
DDX56Q9NY93 SEPT14P3-201ENST00000439401 183 ntBASIC4.1□□□□□ -1.75
DDX56Q9NY93 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC4.1□□□□□ -1.75
DDX56Q9NY93 AL732372.2-207ENST00000445840 183 ntBASIC4.1□□□□□ -1.75
DDX56Q9NY93 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
DDX56Q9NY93 SEPT14P2-201ENST00000453405 183 ntBASIC4.1□□□□□ -1.75
DDX56Q9NY93 RPL7P19-201ENST00000469948 618 ntBASIC4.1□□□□□ -1.75
DDX56Q9NY93 SUMO2P6-201ENST00000505273 288 ntBASIC4.1□□□□□ -1.75
DDX56Q9NY93 AC092436.1-201ENST00000506450 503 ntBASIC4.1□□□□□ -1.75
DDX56Q9NY93 SEPT14P4-201ENST00000513445 186 ntBASIC4.1□□□□□ -1.75
DDX56Q9NY93 LRRC34P2-201ENST00000514850 553 ntBASIC4.1□□□□□ -1.75
DDX56Q9NY93 FO082796.1-201ENST00000523795 183 ntBASIC4.1□□□□□ -1.75
DDX56Q9NY93 AC109635.3-201ENST00000529536 185 ntBASIC4.1□□□□□ -1.75
DDX56Q9NY93 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
DDX56Q9NY93 AC090517.2-201ENST00000614966 680 ntBASIC4.1□□□□□ -1.75
DDX56Q9NY93 5S_rRNA.12-201ENST00000617631 107 ntBASIC4.1□□□□□ -1.75
DDX56Q9NY93 U6.42-201ENST00000618440 107 ntBASIC4.1□□□□□ -1.75
DDX56Q9NY93 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC4.1□□□□□ -1.75
DDX56Q9NY93 MIR1321-201ENST00000637766 79 ntBASIC4.1□□□□□ -1.75
DDX56Q9NY93 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
DDX56Q9NY93 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.1□□□□□ -1.75
DDX56Q9NY93 ANKRD36BP1-202ENST00000604892 1417 ntBASIC4.1□□□□□ -1.75
DDX56Q9NY93 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
DDX56Q9NY93 IL33-203ENST00000456383 2501 ntTSL 5 BASIC4.1□□□□□ -1.75
DDX56Q9NY93 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.09□□□□□ -1.75
DDX56Q9NY93 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC4.09□□□□□ -1.75
DDX56Q9NY93 CKAP2P1-201ENST00000555477 2049 ntBASIC4.09□□□□□ -1.75
DDX56Q9NY93 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.09□□□□□ -1.75
DDX56Q9NY93 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
DDX56Q9NY93 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
DDX56Q9NY93 RNU4-12P-201ENST00000365233 139 ntBASIC4.09□□□□□ -1.75
DDX56Q9NY93 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.09□□□□□ -1.75
DDX56Q9NY93 SNORA69-201ENST00000383895 132 ntBASIC4.09□□□□□ -1.75
DDX56Q9NY93 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
DDX56Q9NY93 SNORD37.1-201ENST00000390968 65 ntBASIC4.09□□□□□ -1.75
DDX56Q9NY93 RNU6-780P-201ENST00000391030 104 ntBASIC4.09□□□□□ -1.75
DDX56Q9NY93 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC4.09□□□□□ -1.75
DDX56Q9NY93 HLFP1-201ENST00000402375 499 ntBASIC4.09□□□□□ -1.75
DDX56Q9NY93 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.09□□□□□ -1.75
DDX56Q9NY93 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC4.09□□□□□ -1.75
DDX56Q9NY93 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.09□□□□□ -1.75
DDX56Q9NY93 AL159169.1-201ENST00000421119 127 ntBASIC4.09□□□□□ -1.75
DDX56Q9NY93 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC4.09□□□□□ -1.75
DDX56Q9NY93 UBE2V1P8-201ENST00000437166 265 ntBASIC4.09□□□□□ -1.75
DDX56Q9NY93 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC4.09□□□□□ -1.75
DDX56Q9NY93 BRK1P2-201ENST00000442875 223 ntBASIC4.09□□□□□ -1.75
DDX56Q9NY93 RANP8-201ENST00000444720 713 ntBASIC4.09□□□□□ -1.75
DDX56Q9NY93 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.09□□□□□ -1.75
DDX56Q9NY93 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC4.09□□□□□ -1.75
DDX56Q9NY93 AC073415.1-201ENST00000449240 153 ntBASIC4.09□□□□□ -1.75
DDX56Q9NY93 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC4.09□□□□□ -1.75
DDX56Q9NY93 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC4.09□□□□□ -1.75
DDX56Q9NY93 MTATP6P7-201ENST00000453315 681 ntBASIC4.09□□□□□ -1.75
DDX56Q9NY93 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC4.09□□□□□ -1.75
DDX56Q9NY93 AL049830.2-201ENST00000480072 201 ntBASIC4.09□□□□□ -1.75
DDX56Q9NY93 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC4.09□□□□□ -1.75
DDX56Q9NY93 RNU6-718P-201ENST00000516166 105 ntBASIC4.09□□□□□ -1.75
DDX56Q9NY93 RNU4ATAC8P-201ENST00000516196 109 ntBASIC4.09□□□□□ -1.75
DDX56Q9NY93 RNA5SP179-201ENST00000517284 121 ntBASIC4.09□□□□□ -1.75
DDX56Q9NY93 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.09□□□□□ -1.75
DDX56Q9NY93 AC087369.1-201ENST00000520775 996 ntBASIC4.09□□□□□ -1.75
DDX56Q9NY93 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.09□□□□□ -1.75
DDX56Q9NY93 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.09□□□□□ -1.75
DDX56Q9NY93 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.09□□□□□ -1.75
DDX56Q9NY93 AC106782.4-201ENST00000568264 210 ntBASIC4.09□□□□□ -1.75
DDX56Q9NY93 AC023575.1-201ENST00000580510 358 ntBASIC4.09□□□□□ -1.75
DDX56Q9NY93 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC4.09□□□□□ -1.75
DDX56Q9NY93 HMGB1P50-201ENST00000605814 607 ntBASIC4.09□□□□□ -1.75
DDX56Q9NY93 AC079684.1-201ENST00000621405 437 ntBASIC4.09□□□□□ -1.75
DDX56Q9NY93 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC4.09□□□□□ -1.75
DDX56Q9NY93 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
DDX56Q9NY93 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
DDX56Q9NY93 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
DDX56Q9NY93 EFTUD1P2-201ENST00000514817 1603 ntBASIC4.09□□□□□ -1.76
DDX56Q9NY93 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
DDX56Q9NY93 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
DDX56Q9NY93 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.76
DDX56Q9NY93 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
DDX56Q9NY93 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
DDX56Q9NY93 FAM35DP-201ENST00000323387 2712 ntBASIC4.08□□□□□ -1.76
DDX56Q9NY93 RNU6-552P-201ENST00000362869 119 ntBASIC4.08□□□□□ -1.76
DDX56Q9NY93 MDM4-202ENST00000367180 547 ntTSL 3 BASIC4.08□□□□□ -1.76
DDX56Q9NY93 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
DDX56Q9NY93 RNU1-73P-201ENST00000383971 164 ntBASIC4.08□□□□□ -1.76
DDX56Q9NY93 RNU6-903P-201ENST00000391270 109 ntBASIC4.08□□□□□ -1.76
DDX56Q9NY93 AL354719.1-201ENST00000406535 843 ntBASIC4.08□□□□□ -1.76
DDX56Q9NY93 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC4.08□□□□□ -1.76
DDX56Q9NY93 MTCYBP8-201ENST00000422855 651 ntBASIC4.08□□□□□ -1.76
DDX56Q9NY93 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC4.08□□□□□ -1.76
DDX56Q9NY93 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.08□□□□□ -1.76
DDX56Q9NY93 ELF2P3-201ENST00000445099 1506 ntBASIC4.08□□□□□ -1.76
DDX56Q9NY93 RPL21P11-201ENST00000461458 483 ntBASIC4.08□□□□□ -1.76
DDX56Q9NY93 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
DDX56Q9NY93 AC233702.1-201ENST00000482905 502 ntBASIC4.08□□□□□ -1.76
DDX56Q9NY93 BTF3L4P4-201ENST00000506381 449 ntBASIC4.08□□□□□ -1.76
DDX56Q9NY93 AC104136.1-201ENST00000512969 394 ntBASIC4.08□□□□□ -1.76
DDX56Q9NY93 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 195.5 ms