Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC1.41□□□□□ -2.18
KIAA1549Q9HCM3 AC124293.1-201ENST00000530034 493 ntBASIC1.41□□□□□ -2.18
KIAA1549Q9HCM3 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.41□□□□□ -2.18
KIAA1549Q9HCM3 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.41□□□□□ -2.18
KIAA1549Q9HCM3 AC068135.2-201ENST00000569293 1028 ntBASIC1.41□□□□□ -2.18
KIAA1549Q9HCM3 AC007229.1-201ENST00000590455 412 ntBASIC1.41□□□□□ -2.18
KIAA1549Q9HCM3 AL355877.2-201ENST00000603670 358 ntBASIC1.41□□□□□ -2.18
KIAA1549Q9HCM3 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.41□□□□□ -2.18
KIAA1549Q9HCM3 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
KIAA1549Q9HCM3 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.41□□□□□ -2.18
KIAA1549Q9HCM3 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.41□□□□□ -2.18
KIAA1549Q9HCM3 RNU6-461P-201ENST00000364195 107 ntBASIC1.41□□□□□ -2.18
KIAA1549Q9HCM3 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
KIAA1549Q9HCM3 AL121978.1-201ENST00000402778 359 ntBASIC1.41□□□□□ -2.18
KIAA1549Q9HCM3 USP12PX-201ENST00000432383 1057 ntBASIC1.41□□□□□ -2.18
KIAA1549Q9HCM3 AL353689.1-201ENST00000438895 199 ntBASIC1.41□□□□□ -2.18
KIAA1549Q9HCM3 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC1.41□□□□□ -2.18
KIAA1549Q9HCM3 AC097493.1-201ENST00000463958 372 ntBASIC1.41□□□□□ -2.18
KIAA1549Q9HCM3 SCARNA11.3-201ENST00000517276 130 ntBASIC1.41□□□□□ -2.18
KIAA1549Q9HCM3 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC1.41□□□□□ -2.18
KIAA1549Q9HCM3 AL391261.3-201ENST00000557194 520 ntBASIC1.41□□□□□ -2.18
KIAA1549Q9HCM3 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.41□□□□□ -2.18
KIAA1549Q9HCM3 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC1.41□□□□□ -2.18
KIAA1549Q9HCM3 AC010546.1-201ENST00000569391 485 ntBASIC1.41□□□□□ -2.18
KIAA1549Q9HCM3 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC1.41□□□□□ -2.18
KIAA1549Q9HCM3 BNIP3P4-201ENST00000604946 565 ntBASIC1.41□□□□□ -2.18
KIAA1549Q9HCM3 AL163051.2-201ENST00000618976 735 ntBASIC1.41□□□□□ -2.18
KIAA1549Q9HCM3 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.4□□□□□ -2.18
KIAA1549Q9HCM3 Y_RNA.338-201ENST00000365320 114 ntBASIC1.4□□□□□ -2.19
KIAA1549Q9HCM3 RNU1-52P-201ENST00000384190 164 ntBASIC1.4□□□□□ -2.19
KIAA1549Q9HCM3 AL023807.1-201ENST00000407932 359 ntBASIC1.4□□□□□ -2.19
KIAA1549Q9HCM3 MTND4LP14-201ENST00000429447 288 ntBASIC1.4□□□□□ -2.19
KIAA1549Q9HCM3 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC1.4□□□□□ -2.19
KIAA1549Q9HCM3 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.4□□□□□ -2.19
KIAA1549Q9HCM3 AL500527.1-201ENST00000448532 255 ntBASIC1.4□□□□□ -2.19
KIAA1549Q9HCM3 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC1.4□□□□□ -2.19
KIAA1549Q9HCM3 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
KIAA1549Q9HCM3 AC107626.1-201ENST00000471084 183 ntBASIC1.4□□□□□ -2.19
KIAA1549Q9HCM3 AC093281.2-201ENST00000510153 597 ntBASIC1.4□□□□□ -2.19
KIAA1549Q9HCM3 AC048346.1-201ENST00000510247 144 ntBASIC1.4□□□□□ -2.19
KIAA1549Q9HCM3 RNU2-19P-201ENST00000517288 84 ntBASIC1.4□□□□□ -2.19
KIAA1549Q9HCM3 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.4□□□□□ -2.19
KIAA1549Q9HCM3 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC1.4□□□□□ -2.19
KIAA1549Q9HCM3 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.4□□□□□ -2.19
KIAA1549Q9HCM3 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC1.4□□□□□ -2.19
KIAA1549Q9HCM3 AC012414.2-201ENST00000559474 187 ntBASIC1.4□□□□□ -2.19
KIAA1549Q9HCM3 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC1.4□□□□□ -2.19
KIAA1549Q9HCM3 AL031176.1-201ENST00000604554 466 ntBASIC1.4□□□□□ -2.19
KIAA1549Q9HCM3 snoU13.31-201ENST00000607291 104 ntBASIC1.4□□□□□ -2.19
KIAA1549Q9HCM3 AL391813.2-201ENST00000609113 322 ntBASIC1.4□□□□□ -2.19
KIAA1549Q9HCM3 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.4□□□□□ -2.19
KIAA1549Q9HCM3 RNU6-251P-201ENST00000363235 104 ntBASIC1.39□□□□□ -2.19
KIAA1549Q9HCM3 RNU1-42P-201ENST00000364033 160 ntBASIC1.39□□□□□ -2.19
KIAA1549Q9HCM3 Y_RNA.226-201ENST00000364337 114 ntBASIC1.39□□□□□ -2.19
KIAA1549Q9HCM3 RNU6-217P-201ENST00000384164 104 ntBASIC1.39□□□□□ -2.19
KIAA1549Q9HCM3 MIR325-201ENST00000385260 98 ntBASIC1.39□□□□□ -2.19
KIAA1549Q9HCM3 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
KIAA1549Q9HCM3 RNU2-15P-201ENST00000410692 191 ntBASIC1.39□□□□□ -2.19
KIAA1549Q9HCM3 AL030996.1-201ENST00000411430 235 ntBASIC1.39□□□□□ -2.19
KIAA1549Q9HCM3 ISCA1P6-201ENST00000427740 390 ntBASIC1.39□□□□□ -2.19
KIAA1549Q9HCM3 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC1.39□□□□□ -2.19
KIAA1549Q9HCM3 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
KIAA1549Q9HCM3 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
KIAA1549Q9HCM3 AC140059.1-201ENST00000489238 361 ntBASIC1.39□□□□□ -2.19
KIAA1549Q9HCM3 RPS15AP36-201ENST00000492022 382 ntBASIC1.39□□□□□ -2.19
KIAA1549Q9HCM3 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC1.39□□□□□ -2.19
KIAA1549Q9HCM3 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC1.39□□□□□ -2.19
KIAA1549Q9HCM3 Y_RNA.675-201ENST00000516389 149 ntBASIC1.39□□□□□ -2.19
KIAA1549Q9HCM3 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC1.39□□□□□ -2.19
KIAA1549Q9HCM3 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC1.39□□□□□ -2.19
KIAA1549Q9HCM3 MIR4781-201ENST00000585250 76 ntBASIC1.39□□□□□ -2.19
KIAA1549Q9HCM3 AC009090.3-201ENST00000616553 565 ntBASIC1.39□□□□□ -2.19
KIAA1549Q9HCM3 AC073968.1-201ENST00000618594 637 ntBASIC1.39□□□□□ -2.19
KIAA1549Q9HCM3 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.39□□□□□ -2.19
KIAA1549Q9HCM3 WWP1P1-201ENST00000466609 2769 ntBASIC1.39□□□□□ -2.19
KIAA1549Q9HCM3 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.39□□□□□ -2.19
KIAA1549Q9HCM3 AC010329.5-201ENST00000623497 2174 ntBASIC1.39□□□□□ -2.19
KIAA1549Q9HCM3 ZBTB8OSP1-201ENST00000342688 498 ntBASIC1.39□□□□□ -2.19
KIAA1549Q9HCM3 AL355615.1-201ENST00000406187 641 ntBASIC1.39□□□□□ -2.19
KIAA1549Q9HCM3 MIR1290-201ENST00000408735 78 ntBASIC1.39□□□□□ -2.19
KIAA1549Q9HCM3 RNU6-174P-201ENST00000410406 106 ntBASIC1.39□□□□□ -2.19
KIAA1549Q9HCM3 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.39□□□□□ -2.19
KIAA1549Q9HCM3 HMGN2P19-201ENST00000425149 265 ntBASIC1.39□□□□□ -2.19
KIAA1549Q9HCM3 AC009414.1-201ENST00000427200 443 ntBASIC1.39□□□□□ -2.19
KIAA1549Q9HCM3 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.39□□□□□ -2.19
KIAA1549Q9HCM3 BNIP3P2-201ENST00000441221 577 ntBASIC1.39□□□□□ -2.19
KIAA1549Q9HCM3 Z73417.1-201ENST00000447373 778 ntBASIC1.39□□□□□ -2.19
KIAA1549Q9HCM3 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.39□□□□□ -2.19
KIAA1549Q9HCM3 TRGVB-201ENST00000453257 471 ntBASIC1.39□□□□□ -2.19
KIAA1549Q9HCM3 RNU7-23P-201ENST00000459465 62 ntBASIC1.39□□□□□ -2.19
KIAA1549Q9HCM3 RPL32P14-201ENST00000463196 378 ntBASIC1.39□□□□□ -2.19
KIAA1549Q9HCM3 RPS27P21-201ENST00000486977 252 ntBASIC1.39□□□□□ -2.19
KIAA1549Q9HCM3 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC1.39□□□□□ -2.19
KIAA1549Q9HCM3 AC005840.1-201ENST00000498412 377 ntBASIC1.39□□□□□ -2.19
KIAA1549Q9HCM3 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC1.39□□□□□ -2.19
KIAA1549Q9HCM3 LSM6P2-201ENST00000552208 177 ntBASIC1.39□□□□□ -2.19
KIAA1549Q9HCM3 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC1.39□□□□□ -2.19
KIAA1549Q9HCM3 AC002487.1-201ENST00000604565 994 ntBASIC1.39□□□□□ -2.19
KIAA1549Q9HCM3 AC011330.2-201ENST00000621680 635 ntBASIC1.39□□□□□ -2.19
KIAA1549Q9HCM3 AL159972.1-201ENST00000625150 448 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms