Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
RPAP3Q9H6T3 SNORA67.1-201ENST00000364749 141 ntBASIC2.86□□□□□ -1.95
RPAP3Q9H6T3 RNU6-157P-201ENST00000383957 107 ntBASIC2.86□□□□□ -1.95
RPAP3Q9H6T3 RNU6-637P-201ENST00000384050 107 ntBASIC2.86□□□□□ -1.95
RPAP3Q9H6T3 MIR514A1-201ENST00000385133 98 ntBASIC2.86□□□□□ -1.95
RPAP3Q9H6T3 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
RPAP3Q9H6T3 AL590004.2-201ENST00000404787 371 ntBASIC2.86□□□□□ -1.95
RPAP3Q9H6T3 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.86□□□□□ -1.95
RPAP3Q9H6T3 PIGPP2-201ENST00000411569 458 ntBASIC2.86□□□□□ -1.95
RPAP3Q9H6T3 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.86□□□□□ -1.95
RPAP3Q9H6T3 AC083875.1-201ENST00000419509 405 ntBASIC2.86□□□□□ -1.95
RPAP3Q9H6T3 MTCO1P27-201ENST00000448269 226 ntBASIC2.86□□□□□ -1.95
RPAP3Q9H6T3 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.86□□□□□ -1.95
RPAP3Q9H6T3 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.86□□□□□ -1.95
RPAP3Q9H6T3 RPS27P26-201ENST00000494583 239 ntBASIC2.86□□□□□ -1.95
RPAP3Q9H6T3 HSPE1P23-201ENST00000509838 286 ntBASIC2.86□□□□□ -1.95
RPAP3Q9H6T3 RNU6-1256P-201ENST00000516539 103 ntBASIC2.86□□□□□ -1.95
RPAP3Q9H6T3 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.86□□□□□ -1.95
RPAP3Q9H6T3 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC2.86□□□□□ -1.95
RPAP3Q9H6T3 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.86□□□□□ -1.95
RPAP3Q9H6T3 AC068313.1-201ENST00000604028 1008 ntBASIC2.86□□□□□ -1.95
RPAP3Q9H6T3 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.86□□□□□ -1.95
RPAP3Q9H6T3 AC099063.3-201ENST00000642066 185 ntBASIC2.86□□□□□ -1.95
RPAP3Q9H6T3 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
RPAP3Q9H6T3 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
RPAP3Q9H6T3 RNU6-462P-201ENST00000362659 105 ntBASIC2.85□□□□□ -1.95
RPAP3Q9H6T3 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.85□□□□□ -1.95
RPAP3Q9H6T3 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
RPAP3Q9H6T3 SNORD88.1-201ENST00000408684 91 ntBASIC2.85□□□□□ -1.95
RPAP3Q9H6T3 TPMTP3-201ENST00000411928 735 ntBASIC2.85□□□□□ -1.95
RPAP3Q9H6T3 AL008987.1-201ENST00000415528 237 ntBASIC2.85□□□□□ -1.95
RPAP3Q9H6T3 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.85□□□□□ -1.95
RPAP3Q9H6T3 NDUFB4P7-201ENST00000423198 363 ntBASIC2.85□□□□□ -1.95
RPAP3Q9H6T3 AC008850.1-201ENST00000427546 362 ntBASIC2.85□□□□□ -1.95
RPAP3Q9H6T3 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.85□□□□□ -1.95
RPAP3Q9H6T3 AC009237.8-201ENST00000445492 379 ntBASIC2.85□□□□□ -1.95
RPAP3Q9H6T3 AC104389.3-201ENST00000445629 235 ntBASIC2.85□□□□□ -1.95
RPAP3Q9H6T3 MTND1P9-201ENST00000453775 944 ntBASIC2.85□□□□□ -1.95
RPAP3Q9H6T3 RBM43P1-201ENST00000476891 1081 ntBASIC2.85□□□□□ -1.95
RPAP3Q9H6T3 RPL30P5-201ENST00000494923 336 ntBASIC2.85□□□□□ -1.95
RPAP3Q9H6T3 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.85□□□□□ -1.95
RPAP3Q9H6T3 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
RPAP3Q9H6T3 DUXAP1-201ENST00000556632 463 ntBASIC2.85□□□□□ -1.95
RPAP3Q9H6T3 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.85□□□□□ -1.95
RPAP3Q9H6T3 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC2.85□□□□□ -1.95
RPAP3Q9H6T3 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.85□□□□□ -1.95
RPAP3Q9H6T3 AC023043.3-201ENST00000593113 385 ntBASIC2.85□□□□□ -1.95
RPAP3Q9H6T3 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC2.85□□□□□ -1.95
RPAP3Q9H6T3 UCA1.1-201ENST00000620952 75 ntBASIC2.85□□□□□ -1.95
RPAP3Q9H6T3 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.85□□□□□ -1.95
RPAP3Q9H6T3 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.85□□□□□ -1.95
RPAP3Q9H6T3 AL159972.1-201ENST00000625150 448 ntBASIC2.85□□□□□ -1.95
RPAP3Q9H6T3 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC2.85□□□□□ -1.95
RPAP3Q9H6T3 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.85□□□□□ -1.95
RPAP3Q9H6T3 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.85□□□□□ -1.95
RPAP3Q9H6T3 Z82209.1-201ENST00000422141 2135 ntBASIC2.84□□□□□ -1.95
RPAP3Q9H6T3 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.84□□□□□ -1.95
RPAP3Q9H6T3 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.84□□□□□ -1.95
RPAP3Q9H6T3 FAM133CP-201ENST00000332869 704 ntBASIC2.84□□□□□ -1.95
RPAP3Q9H6T3 AC119751.3-201ENST00000399720 670 ntBASIC2.84□□□□□ -1.95
RPAP3Q9H6T3 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
RPAP3Q9H6T3 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.84□□□□□ -1.95
RPAP3Q9H6T3 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.84□□□□□ -1.95
RPAP3Q9H6T3 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC2.84□□□□□ -1.95
RPAP3Q9H6T3 AL356867.1-201ENST00000429623 299 ntBASIC2.84□□□□□ -1.95
RPAP3Q9H6T3 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC2.84□□□□□ -1.95
RPAP3Q9H6T3 TAAR7P-201ENST00000436141 242 ntBASIC2.84□□□□□ -1.95
RPAP3Q9H6T3 RPS15AP7-201ENST00000439294 405 ntBASIC2.84□□□□□ -1.95
RPAP3Q9H6T3 AP000542.1-201ENST00000448473 371 ntBASIC2.84□□□□□ -1.95
RPAP3Q9H6T3 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
RPAP3Q9H6T3 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
RPAP3Q9H6T3 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.84□□□□□ -1.95
RPAP3Q9H6T3 snoU13.28-201ENST00000459235 104 ntBASIC2.84□□□□□ -1.95
RPAP3Q9H6T3 RPS29P21-201ENST00000496272 170 ntBASIC2.84□□□□□ -1.95
RPAP3Q9H6T3 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC2.84□□□□□ -1.95
RPAP3Q9H6T3 AC020699.1-201ENST00000505161 445 ntBASIC2.84□□□□□ -1.95
RPAP3Q9H6T3 AC113155.1-201ENST00000511141 769 ntBASIC2.84□□□□□ -1.95
RPAP3Q9H6T3 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.95
RPAP3Q9H6T3 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.84□□□□□ -1.95
RPAP3Q9H6T3 RNA5SP216-201ENST00000516111 123 ntBASIC2.84□□□□□ -1.95
RPAP3Q9H6T3 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.84□□□□□ -1.95
RPAP3Q9H6T3 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.84□□□□□ -1.95
RPAP3Q9H6T3 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
RPAP3Q9H6T3 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.84□□□□□ -1.95
RPAP3Q9H6T3 AC087465.1-201ENST00000560574 245 ntBASIC2.84□□□□□ -1.95
RPAP3Q9H6T3 AC090616.3-201ENST00000582184 217 ntBASIC2.84□□□□□ -1.95
RPAP3Q9H6T3 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC2.84□□□□□ -1.95
RPAP3Q9H6T3 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.84□□□□□ -1.95
RPAP3Q9H6T3 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC2.84□□□□□ -1.95
RPAP3Q9H6T3 AC104763.2-201ENST00000604179 382 ntBASIC2.84□□□□□ -1.95
RPAP3Q9H6T3 AL050303.3-201ENST00000613704 284 ntBASIC2.84□□□□□ -1.95
RPAP3Q9H6T3 AL607023.1-201ENST00000620045 248 ntBASIC2.84□□□□□ -1.95
RPAP3Q9H6T3 AL359757.2-201ENST00000624309 274 ntBASIC2.84□□□□□ -1.95
RPAP3Q9H6T3 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.83□□□□□ -1.96
RPAP3Q9H6T3 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
RPAP3Q9H6T3 RNA5SP456-201ENST00000364002 114 ntBASIC2.83□□□□□ -1.96
RPAP3Q9H6T3 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.83□□□□□ -1.96
RPAP3Q9H6T3 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.83□□□□□ -1.96
RPAP3Q9H6T3 MIR767-201ENST00000390228 109 ntBASIC2.83□□□□□ -1.96
RPAP3Q9H6T3 RNA5SP425-201ENST00000410336 112 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms