Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.67□□□□□ -1.82
EBF3Q9H4W6 MTCO3P46-201ENST00000425787 232 ntBASIC3.67□□□□□ -1.82
EBF3Q9H4W6 PSMA6P3-201ENST00000428242 164 ntBASIC3.67□□□□□ -1.82
EBF3Q9H4W6 SAR1AP4-201ENST00000429225 591 ntBASIC3.67□□□□□ -1.82
EBF3Q9H4W6 EZH2P1-201ENST00000431167 291 ntBASIC3.67□□□□□ -1.82
EBF3Q9H4W6 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.67□□□□□ -1.82
EBF3Q9H4W6 NDUFB1P1-201ENST00000435191 180 ntBASIC3.67□□□□□ -1.82
EBF3Q9H4W6 CYCSP32-201ENST00000440548 321 ntBASIC3.67□□□□□ -1.82
EBF3Q9H4W6 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.67□□□□□ -1.82
EBF3Q9H4W6 AP1S2P1-201ENST00000457344 379 ntBASIC3.67□□□□□ -1.82
EBF3Q9H4W6 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.67□□□□□ -1.82
EBF3Q9H4W6 AP001992.1-205ENST00000462248 379 ntBASIC3.67□□□□□ -1.82
EBF3Q9H4W6 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.67□□□□□ -1.82
EBF3Q9H4W6 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
EBF3Q9H4W6 RNA5SP309-201ENST00000516670 106 ntBASIC3.67□□□□□ -1.82
EBF3Q9H4W6 RN7SKP57-201ENST00000517248 293 ntBASIC3.67□□□□□ -1.82
EBF3Q9H4W6 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.67□□□□□ -1.82
EBF3Q9H4W6 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.67□□□□□ -1.82
EBF3Q9H4W6 PSMA2P1-201ENST00000526365 646 ntBASIC3.67□□□□□ -1.82
EBF3Q9H4W6 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.67□□□□□ -1.82
EBF3Q9H4W6 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.67□□□□□ -1.82
EBF3Q9H4W6 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.67□□□□□ -1.82
EBF3Q9H4W6 MIR3186-201ENST00000577404 85 ntBASIC3.67□□□□□ -1.82
EBF3Q9H4W6 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.67□□□□□ -1.82
EBF3Q9H4W6 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.67□□□□□ -1.82
EBF3Q9H4W6 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.67□□□□□ -1.82
EBF3Q9H4W6 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3.67□□□□□ -1.82
EBF3Q9H4W6 LLPHP1-201ENST00000603571 367 ntBASIC3.67□□□□□ -1.82
EBF3Q9H4W6 AC021646.1-201ENST00000605469 484 ntBASIC3.67□□□□□ -1.82
EBF3Q9H4W6 AC116312.1-201ENST00000606841 314 ntBASIC3.67□□□□□ -1.82
EBF3Q9H4W6 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.67□□□□□ -1.82
EBF3Q9H4W6 RMST_7.1-201ENST00000621935 268 ntBASIC3.67□□□□□ -1.82
EBF3Q9H4W6 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.67□□□□□ -1.82
EBF3Q9H4W6 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.67□□□□□ -1.82
EBF3Q9H4W6 TPTEP1-208ENST00000636884 213 ntBASIC3.67□□□□□ -1.82
EBF3Q9H4W6 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
EBF3Q9H4W6 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
EBF3Q9H4W6 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
EBF3Q9H4W6 MTND5P3-201ENST00000438536 1800 ntBASIC3.67□□□□□ -1.82
EBF3Q9H4W6 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.67□□□□□ -1.82
EBF3Q9H4W6 ZNF33CP-201ENST00000432492 2030 ntBASIC3.66□□□□□ -1.82
EBF3Q9H4W6 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
EBF3Q9H4W6 AL133383.2-201ENST00000622958 2336 ntBASIC3.66□□□□□ -1.82
EBF3Q9H4W6 AC007656.2-201ENST00000624902 4547 ntBASIC3.66□□□□□ -1.82
EBF3Q9H4W6 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.66□□□□□ -1.82
EBF3Q9H4W6 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
EBF3Q9H4W6 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
EBF3Q9H4W6 SNORD82-201ENST00000365530 70 ntBASIC3.66□□□□□ -1.82
EBF3Q9H4W6 SNORD17-201ENST00000390930 237 ntBASIC3.66□□□□□ -1.82
EBF3Q9H4W6 AL356421.1-201ENST00000403255 413 ntBASIC3.66□□□□□ -1.82
EBF3Q9H4W6 AL354719.1-201ENST00000406535 843 ntBASIC3.66□□□□□ -1.82
EBF3Q9H4W6 RNU2-8P-201ENST00000410727 190 ntBASIC3.66□□□□□ -1.82
EBF3Q9H4W6 Z92545.1-201ENST00000411782 234 ntBASIC3.66□□□□□ -1.82
EBF3Q9H4W6 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.66□□□□□ -1.82
EBF3Q9H4W6 AC007283.2-201ENST00000424739 197 ntBASIC3.66□□□□□ -1.82
EBF3Q9H4W6 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.66□□□□□ -1.82
EBF3Q9H4W6 AC017083.1-201ENST00000428093 483 ntBASIC3.66□□□□□ -1.82
EBF3Q9H4W6 AC005300.1-201ENST00000428401 373 ntBASIC3.66□□□□□ -1.82
EBF3Q9H4W6 AC005326.1-201ENST00000429197 123 ntBASIC3.66□□□□□ -1.82
EBF3Q9H4W6 CACYBPP2-201ENST00000453625 678 ntBASIC3.66□□□□□ -1.82
EBF3Q9H4W6 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.66□□□□□ -1.82
EBF3Q9H4W6 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.66□□□□□ -1.82
EBF3Q9H4W6 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.66□□□□□ -1.82
EBF3Q9H4W6 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.66□□□□□ -1.82
EBF3Q9H4W6 RNU2-27P-201ENST00000516185 142 ntBASIC3.66□□□□□ -1.82
EBF3Q9H4W6 AC008489.1-201ENST00000524271 483 ntBASIC3.66□□□□□ -1.82
EBF3Q9H4W6 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.66□□□□□ -1.82
EBF3Q9H4W6 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
EBF3Q9H4W6 PTP4A1P6-201ENST00000531034 478 ntBASIC3.66□□□□□ -1.82
EBF3Q9H4W6 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.66□□□□□ -1.82
EBF3Q9H4W6 SCOCP1-201ENST00000554676 349 ntBASIC3.66□□□□□ -1.82
EBF3Q9H4W6 AL121821.2-201ENST00000556081 394 ntBASIC3.66□□□□□ -1.82
EBF3Q9H4W6 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.66□□□□□ -1.82
EBF3Q9H4W6 AC090615.1-201ENST00000577519 154 ntBASIC3.66□□□□□ -1.82
EBF3Q9H4W6 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.66□□□□□ -1.82
EBF3Q9H4W6 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.66□□□□□ -1.82
EBF3Q9H4W6 AC243960.4-201ENST00000600532 288 ntBASIC3.66□□□□□ -1.82
EBF3Q9H4W6 AC113194.1-201ENST00000606037 500 ntBASIC3.66□□□□□ -1.82
EBF3Q9H4W6 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.66□□□□□ -1.82
EBF3Q9H4W6 BX664608.1-201ENST00000610519 487 ntBASIC3.66□□□□□ -1.82
EBF3Q9H4W6 DISC2.1-201ENST00000612827 205 ntBASIC3.66□□□□□ -1.82
EBF3Q9H4W6 AC093838.1-201ENST00000613014 469 ntBASIC3.66□□□□□ -1.82
EBF3Q9H4W6 AC009248.2-201ENST00000619826 254 ntBASIC3.66□□□□□ -1.82
EBF3Q9H4W6 AC092628.2-201ENST00000622492 339 ntBASIC3.66□□□□□ -1.82
EBF3Q9H4W6 AL356585.4-201ENST00000623078 1229 ntBASIC3.66□□□□□ -1.82
EBF3Q9H4W6 AC091953.2-201ENST00000623979 160 ntBASIC3.66□□□□□ -1.82
EBF3Q9H4W6 AC090617.10-201ENST00000624308 134 ntBASIC3.66□□□□□ -1.82
EBF3Q9H4W6 AC009161.2-201ENST00000624626 138 ntBASIC3.66□□□□□ -1.82
EBF3Q9H4W6 MTND5P42-201ENST00000637720 498 ntBASIC3.66□□□□□ -1.82
EBF3Q9H4W6 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.66□□□□□ -1.82
EBF3Q9H4W6 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
EBF3Q9H4W6 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.66□□□□□ -1.82
EBF3Q9H4W6 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
EBF3Q9H4W6 RNU6-223P-201ENST00000362830 107 ntBASIC3.65□□□□□ -1.83
EBF3Q9H4W6 RNU6-169P-201ENST00000365336 107 ntBASIC3.65□□□□□ -1.83
EBF3Q9H4W6 U3.15-201ENST00000365398 212 ntBASIC3.65□□□□□ -1.83
EBF3Q9H4W6 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
EBF3Q9H4W6 RNU2-9P-201ENST00000410194 145 ntBASIC3.65□□□□□ -1.83
EBF3Q9H4W6 BX323014.1-201ENST00000412876 237 ntBASIC3.65□□□□□ -1.83
EBF3Q9H4W6 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms