Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 MTCO1P47-201ENST00000523889 1271 ntBASIC3.25□□□□□ -1.89
CCDC68Q9H2F9 VBP1-203ENST00000535916 944 ntTSL 2 BASIC3.25□□□□□ -1.89
CCDC68Q9H2F9 AC007834.2-201ENST00000536310 343 ntBASIC3.25□□□□□ -1.89
CCDC68Q9H2F9 EMP1-206ENST00000537612 505 ntTSL 3 BASIC3.25□□□□□ -1.89
CCDC68Q9H2F9 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC3.25□□□□□ -1.89
CCDC68Q9H2F9 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.25□□□□□ -1.89
CCDC68Q9H2F9 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.25□□□□□ -1.89
CCDC68Q9H2F9 AC025281.1-201ENST00000567026 265 ntBASIC3.25□□□□□ -1.89
CCDC68Q9H2F9 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.25□□□□□ -1.89
CCDC68Q9H2F9 BNIP3P33-201ENST00000598912 569 ntBASIC3.25□□□□□ -1.89
CCDC68Q9H2F9 AL109618.2-201ENST00000605527 211 ntBASIC3.25□□□□□ -1.89
CCDC68Q9H2F9 AL627309.6-201ENST00000606857 840 ntBASIC3.25□□□□□ -1.89
CCDC68Q9H2F9 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.25□□□□□ -1.89
CCDC68Q9H2F9 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
CCDC68Q9H2F9 AC091903.1-201ENST00000624322 454 ntBASIC3.25□□□□□ -1.89
CCDC68Q9H2F9 AL356274.2-201ENST00000624379 3752 ntBASIC3.25□□□□□ -1.89
CCDC68Q9H2F9 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
CCDC68Q9H2F9 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CCDC68Q9H2F9 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CCDC68Q9H2F9 RNU1-70P-201ENST00000362618 164 ntBASIC3.24□□□□□ -1.89
CCDC68Q9H2F9 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
CCDC68Q9H2F9 NPM1P11-201ENST00000417106 855 ntBASIC3.24□□□□□ -1.89
CCDC68Q9H2F9 RPL7P37-201ENST00000425095 738 ntBASIC3.24□□□□□ -1.89
CCDC68Q9H2F9 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.24□□□□□ -1.89
CCDC68Q9H2F9 MTATP6P17-201ENST00000431030 672 ntBASIC3.24□□□□□ -1.89
CCDC68Q9H2F9 RPS15AP5-201ENST00000436276 388 ntBASIC3.24□□□□□ -1.89
CCDC68Q9H2F9 RPS24P13-201ENST00000442520 397 ntBASIC3.24□□□□□ -1.89
CCDC68Q9H2F9 AC009296.1-201ENST00000443146 155 ntBASIC3.24□□□□□ -1.89
CCDC68Q9H2F9 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.24□□□□□ -1.89
CCDC68Q9H2F9 FABP5P15-201ENST00000453566 214 ntBASIC3.24□□□□□ -1.89
CCDC68Q9H2F9 MTCO2P29-201ENST00000465212 189 ntBASIC3.24□□□□□ -1.89
CCDC68Q9H2F9 AC105252.1-201ENST00000503089 286 ntBASIC3.24□□□□□ -1.89
CCDC68Q9H2F9 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.24□□□□□ -1.89
CCDC68Q9H2F9 NDUFB4P2-201ENST00000509515 391 ntBASIC3.24□□□□□ -1.89
CCDC68Q9H2F9 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC3.24□□□□□ -1.89
CCDC68Q9H2F9 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.24□□□□□ -1.89
CCDC68Q9H2F9 SUB1P1-201ENST00000524415 382 ntBASIC3.24□□□□□ -1.89
CCDC68Q9H2F9 OSBPL9P5-201ENST00000542581 171 ntBASIC3.24□□□□□ -1.89
CCDC68Q9H2F9 AL359212.1-201ENST00000556608 614 ntBASIC3.24□□□□□ -1.89
CCDC68Q9H2F9 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.24□□□□□ -1.89
CCDC68Q9H2F9 BNIP3P9-201ENST00000603714 553 ntBASIC3.24□□□□□ -1.89
CCDC68Q9H2F9 AL358072.1-201ENST00000604156 575 ntBASIC3.24□□□□□ -1.89
CCDC68Q9H2F9 AC073657.2-201ENST00000605661 303 ntBASIC3.24□□□□□ -1.89
CCDC68Q9H2F9 AL591516.1-201ENST00000611326 274 ntBASIC3.24□□□□□ -1.89
CCDC68Q9H2F9 AC025594.3-201ENST00000613068 790 ntBASIC3.24□□□□□ -1.89
CCDC68Q9H2F9 AC099654.13-201ENST00000639774 207 ntBASIC3.24□□□□□ -1.89
CCDC68Q9H2F9 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CCDC68Q9H2F9 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.24□□□□□ -1.89
CCDC68Q9H2F9 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
CCDC68Q9H2F9 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
CCDC68Q9H2F9 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
CCDC68Q9H2F9 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
CCDC68Q9H2F9 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CCDC68Q9H2F9 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.23□□□□□ -1.89
CCDC68Q9H2F9 AL137003.2-201ENST00000606924 2538 ntBASIC3.23□□□□□ -1.89
CCDC68Q9H2F9 RNU4-21P-201ENST00000362802 126 ntBASIC3.23□□□□□ -1.89
CCDC68Q9H2F9 SNORD56.2-201ENST00000363242 71 ntBASIC3.23□□□□□ -1.89
CCDC68Q9H2F9 RPL21P3-201ENST00000395517 478 ntBASIC3.23□□□□□ -1.89
CCDC68Q9H2F9 RNU2-8P-201ENST00000410727 190 ntBASIC3.23□□□□□ -1.89
CCDC68Q9H2F9 RNA5SP344-201ENST00000411081 104 ntBASIC3.23□□□□□ -1.89
CCDC68Q9H2F9 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.23□□□□□ -1.89
CCDC68Q9H2F9 NDUFS5P4-201ENST00000412983 318 ntBASIC3.23□□□□□ -1.89
CCDC68Q9H2F9 ELOCP4-201ENST00000420090 333 ntBASIC3.23□□□□□ -1.89
CCDC68Q9H2F9 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
CCDC68Q9H2F9 AC007283.2-201ENST00000424739 197 ntBASIC3.23□□□□□ -1.89
CCDC68Q9H2F9 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.23□□□□□ -1.89
CCDC68Q9H2F9 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CCDC68Q9H2F9 HMGB3P12-201ENST00000438745 556 ntBASIC3.23□□□□□ -1.89
CCDC68Q9H2F9 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.23□□□□□ -1.89
CCDC68Q9H2F9 ATP5C1P1-201ENST00000441945 895 ntBASIC3.23□□□□□ -1.89
CCDC68Q9H2F9 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.23□□□□□ -1.89
CCDC68Q9H2F9 AC146507.2-201ENST00000460608 476 ntBASIC3.23□□□□□ -1.89
CCDC68Q9H2F9 RPL39P36-201ENST00000490784 156 ntBASIC3.23□□□□□ -1.89
CCDC68Q9H2F9 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.23□□□□□ -1.89
CCDC68Q9H2F9 AC009901.1-201ENST00000506703 541 ntBASIC3.23□□□□□ -1.89
CCDC68Q9H2F9 RNU1-103P-201ENST00000516502 125 ntBASIC3.23□□□□□ -1.89
CCDC68Q9H2F9 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.23□□□□□ -1.89
CCDC68Q9H2F9 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.23□□□□□ -1.89
CCDC68Q9H2F9 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.23□□□□□ -1.89
CCDC68Q9H2F9 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.23□□□□□ -1.89
CCDC68Q9H2F9 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.23□□□□□ -1.89
CCDC68Q9H2F9 AC008088.1-201ENST00000580993 280 ntBASIC3.23□□□□□ -1.89
CCDC68Q9H2F9 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.23□□□□□ -1.89
CCDC68Q9H2F9 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.23□□□□□ -1.89
CCDC68Q9H2F9 AC010620.2-201ENST00000600135 313 ntBASIC3.23□□□□□ -1.89
CCDC68Q9H2F9 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.23□□□□□ -1.89
CCDC68Q9H2F9 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.23□□□□□ -1.89
CCDC68Q9H2F9 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.23□□□□□ -1.89
CCDC68Q9H2F9 DUSP12P1-201ENST00000612874 516 ntBASIC3.23□□□□□ -1.89
CCDC68Q9H2F9 AC008250.2-201ENST00000615261 205 ntBASIC3.23□□□□□ -1.89
CCDC68Q9H2F9 AC108479.2-201ENST00000617314 601 ntBASIC3.23□□□□□ -1.89
CCDC68Q9H2F9 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CCDC68Q9H2F9 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CCDC68Q9H2F9 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CCDC68Q9H2F9 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CCDC68Q9H2F9 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
CCDC68Q9H2F9 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CCDC68Q9H2F9 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CCDC68Q9H2F9 GNG5P1-201ENST00000255500 204 ntBASIC3.22□□□□□ -1.89
CCDC68Q9H2F9 RNU5E-1-201ENST00000362477 120 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms