Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 CYCSP43-201ENST00000438233 310 ntBASIC5.14□□□□□ -1.59
COL25A1Q9BXS0 AL162591.2-201ENST00000449634 317 ntBASIC5.14□□□□□ -1.59
COL25A1Q9BXS0 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC5.14□□□□□ -1.59
COL25A1Q9BXS0 AC022795.1-201ENST00000473808 480 ntBASIC5.14□□□□□ -1.59
COL25A1Q9BXS0 VN1R105P-201ENST00000486595 910 ntBASIC5.14□□□□□ -1.59
COL25A1Q9BXS0 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.14□□□□□ -1.59
COL25A1Q9BXS0 Y_RNA.706-201ENST00000516933 99 ntBASIC5.14□□□□□ -1.59
COL25A1Q9BXS0 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC5.14□□□□□ -1.59
COL25A1Q9BXS0 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
COL25A1Q9BXS0 RPL23AP78-201ENST00000599928 470 ntBASIC5.14□□□□□ -1.59
COL25A1Q9BXS0 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.14□□□□□ -1.59
COL25A1Q9BXS0 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
COL25A1Q9BXS0 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.14□□□□□ -1.59
COL25A1Q9BXS0 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC5.14□□□□□ -1.59
COL25A1Q9BXS0 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
COL25A1Q9BXS0 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC5.14□□□□□ -1.59
COL25A1Q9BXS0 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.14□□□□□ -1.59
COL25A1Q9BXS0 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.14□□□□□ -1.59
COL25A1Q9BXS0 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
COL25A1Q9BXS0 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.14□□□□□ -1.59
COL25A1Q9BXS0 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
COL25A1Q9BXS0 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
COL25A1Q9BXS0 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
COL25A1Q9BXS0 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.13□□□□□ -1.59
COL25A1Q9BXS0 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC5.13□□□□□ -1.59
COL25A1Q9BXS0 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.13□□□□□ -1.59
COL25A1Q9BXS0 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.13□□□□□ -1.59
COL25A1Q9BXS0 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
COL25A1Q9BXS0 MIR372-201ENST00000362225 67 ntBASIC5.13□□□□□ -1.59
COL25A1Q9BXS0 RNA5SP326-201ENST00000363209 110 ntBASIC5.13□□□□□ -1.59
COL25A1Q9BXS0 RNU6-1243P-201ENST00000364028 107 ntBASIC5.13□□□□□ -1.59
COL25A1Q9BXS0 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
COL25A1Q9BXS0 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC5.13□□□□□ -1.59
COL25A1Q9BXS0 AL354714.3-201ENST00000447284 493 ntBASIC5.13□□□□□ -1.59
COL25A1Q9BXS0 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.13□□□□□ -1.59
COL25A1Q9BXS0 IGHV5-78-201ENST00000450948 295 ntBASIC5.13□□□□□ -1.59
COL25A1Q9BXS0 ZFRP1-201ENST00000457579 2970 ntBASIC5.13□□□□□ -1.59
COL25A1Q9BXS0 SCARNA10-201ENST00000459255 330 ntBASIC5.13□□□□□ -1.59
COL25A1Q9BXS0 U8.21-201ENST00000459536 136 ntBASIC5.13□□□□□ -1.59
COL25A1Q9BXS0 RPS17P2-201ENST00000461663 408 ntBASIC5.13□□□□□ -1.59
COL25A1Q9BXS0 AC053481.1-201ENST00000467217 306 ntBASIC5.13□□□□□ -1.59
COL25A1Q9BXS0 RN7SL814P-201ENST00000487715 300 ntBASIC5.13□□□□□ -1.59
COL25A1Q9BXS0 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC5.13□□□□□ -1.59
COL25A1Q9BXS0 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC5.13□□□□□ -1.59
COL25A1Q9BXS0 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC5.13□□□□□ -1.59
COL25A1Q9BXS0 RPL21P9-201ENST00000556149 474 ntBASIC5.13□□□□□ -1.59
COL25A1Q9BXS0 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC5.13□□□□□ -1.59
COL25A1Q9BXS0 AC009314.1-201ENST00000603871 304 ntBASIC5.13□□□□□ -1.59
COL25A1Q9BXS0 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC5.13□□□□□ -1.59
COL25A1Q9BXS0 TUG1_4.1-201ENST00000619464 181 ntBASIC5.13□□□□□ -1.59
COL25A1Q9BXS0 AC099506.2-201ENST00000623074 221 ntBASIC5.13□□□□□ -1.59
COL25A1Q9BXS0 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC5.13□□□□□ -1.59
COL25A1Q9BXS0 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.13□□□□□ -1.59
COL25A1Q9BXS0 AC025031.4-201ENST00000621248 3271 ntBASIC5.13□□□□□ -1.59
COL25A1Q9BXS0 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
COL25A1Q9BXS0 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.13□□□□□ -1.59
COL25A1Q9BXS0 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC5.13□□□□□ -1.59
COL25A1Q9BXS0 PROS2P-201ENST00000474651 1951 ntBASIC5.13□□□□□ -1.59
COL25A1Q9BXS0 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
COL25A1Q9BXS0 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL25A1Q9BXS0 AC015799.1-201ENST00000622996 3122 ntBASIC5.12□□□□□ -1.59
COL25A1Q9BXS0 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
COL25A1Q9BXS0 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL25A1Q9BXS0 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
COL25A1Q9BXS0 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL25A1Q9BXS0 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
COL25A1Q9BXS0 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
COL25A1Q9BXS0 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
COL25A1Q9BXS0 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.12□□□□□ -1.59
COL25A1Q9BXS0 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.12□□□□□ -1.59
COL25A1Q9BXS0 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.12□□□□□ -1.59
COL25A1Q9BXS0 SCARNA15-201ENST00000607520 4325 ntBASIC5.12□□□□□ -1.59
COL25A1Q9BXS0 AC007685.1-201ENST00000329806 452 ntBASIC5.12□□□□□ -1.59
COL25A1Q9BXS0 MIR410-201ENST00000362222 80 ntBASIC5.12□□□□□ -1.59
COL25A1Q9BXS0 RNU6-288P-201ENST00000363690 104 ntBASIC5.12□□□□□ -1.59
COL25A1Q9BXS0 RNU6-270P-201ENST00000364131 105 ntBASIC5.12□□□□□ -1.59
COL25A1Q9BXS0 Y_RNA.412-201ENST00000384001 104 ntBASIC5.12□□□□□ -1.59
COL25A1Q9BXS0 AL353621.1-201ENST00000418219 243 ntBASIC5.12□□□□□ -1.59
COL25A1Q9BXS0 RPS15AP40-201ENST00000419621 391 ntBASIC5.12□□□□□ -1.59
COL25A1Q9BXS0 RPS26P21-201ENST00000475397 348 ntBASIC5.12□□□□□ -1.59
COL25A1Q9BXS0 AC015795.1-201ENST00000513669 327 ntBASIC5.12□□□□□ -1.59
COL25A1Q9BXS0 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
COL25A1Q9BXS0 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC5.12□□□□□ -1.59
COL25A1Q9BXS0 AC090617.3-201ENST00000573670 475 ntBASIC5.12□□□□□ -1.59
COL25A1Q9BXS0 RN7SL176P-201ENST00000580352 264 ntBASIC5.12□□□□□ -1.59
COL25A1Q9BXS0 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC5.12□□□□□ -1.59
COL25A1Q9BXS0 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC5.12□□□□□ -1.59
COL25A1Q9BXS0 DDX10P1-201ENST00000448545 1933 ntBASIC5.12□□□□□ -1.59
COL25A1Q9BXS0 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL25A1Q9BXS0 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC5.12□□□□□ -1.59
COL25A1Q9BXS0 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
COL25A1Q9BXS0 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL25A1Q9BXS0 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.12□□□□□ -1.59
COL25A1Q9BXS0 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL25A1Q9BXS0 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
COL25A1Q9BXS0 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
COL25A1Q9BXS0 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
COL25A1Q9BXS0 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL25A1Q9BXS0 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
COL25A1Q9BXS0 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms