Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 NDUFS5P1-201ENST00000405668 289 ntBASIC4.09□□□□□ -1.75
LRFN3Q9BTN0 RNU2-9P-201ENST00000410194 145 ntBASIC4.09□□□□□ -1.75
LRFN3Q9BTN0 RNU6-1148P-201ENST00000410992 104 ntBASIC4.09□□□□□ -1.75
LRFN3Q9BTN0 RN7SKP140-201ENST00000411196 284 ntBASIC4.09□□□□□ -1.75
LRFN3Q9BTN0 VN1R36P-201ENST00000414936 291 ntBASIC4.09□□□□□ -1.75
LRFN3Q9BTN0 RPS23P10-201ENST00000416185 486 ntBASIC4.09□□□□□ -1.75
LRFN3Q9BTN0 AL139247.1-201ENST00000422768 325 ntBASIC4.09□□□□□ -1.75
LRFN3Q9BTN0 AL590383.1-201ENST00000428602 75 ntBASIC4.09□□□□□ -1.75
LRFN3Q9BTN0 RPS6P12-201ENST00000432491 726 ntBASIC4.09□□□□□ -1.75
LRFN3Q9BTN0 RPL35AP21-201ENST00000437667 333 ntBASIC4.09□□□□□ -1.75
LRFN3Q9BTN0 BRK1P2-201ENST00000442875 223 ntBASIC4.09□□□□□ -1.75
LRFN3Q9BTN0 RPL21P23-201ENST00000446654 460 ntBASIC4.09□□□□□ -1.75
LRFN3Q9BTN0 AL031584.1-201ENST00000447169 754 ntBASIC4.09□□□□□ -1.75
LRFN3Q9BTN0 AC020550.1-201ENST00000447385 163 ntBASIC4.09□□□□□ -1.75
LRFN3Q9BTN0 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC4.09□□□□□ -1.75
LRFN3Q9BTN0 Y_RNA.638-201ENST00000459374 113 ntBASIC4.09□□□□□ -1.75
LRFN3Q9BTN0 AL133162.1-201ENST00000463228 453 ntBASIC4.09□□□□□ -1.75
LRFN3Q9BTN0 RPL23AP55-201ENST00000498163 452 ntBASIC4.09□□□□□ -1.75
LRFN3Q9BTN0 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC4.09□□□□□ -1.75
LRFN3Q9BTN0 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC4.09□□□□□ -1.75
LRFN3Q9BTN0 RNA5SP468-201ENST00000516782 93 ntBASIC4.09□□□□□ -1.75
LRFN3Q9BTN0 RN7SKP258-201ENST00000517151 304 ntBASIC4.09□□□□□ -1.75
LRFN3Q9BTN0 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
LRFN3Q9BTN0 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
LRFN3Q9BTN0 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.09□□□□□ -1.75
LRFN3Q9BTN0 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.09□□□□□ -1.75
LRFN3Q9BTN0 AC010525.2-201ENST00000590920 195 ntBASIC4.09□□□□□ -1.75
LRFN3Q9BTN0 AC012493.2-201ENST00000595083 291 ntBASIC4.09□□□□□ -1.75
LRFN3Q9BTN0 YPEL5P2-201ENST00000605553 359 ntBASIC4.09□□□□□ -1.75
LRFN3Q9BTN0 AC006386.2-201ENST00000624491 75 ntBASIC4.09□□□□□ -1.75
LRFN3Q9BTN0 AC012005.1-201ENST00000624575 75 ntBASIC4.09□□□□□ -1.75
LRFN3Q9BTN0 U6.114-201ENST00000636407 96 ntBASIC4.09□□□□□ -1.75
LRFN3Q9BTN0 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LRFN3Q9BTN0 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC4.09□□□□□ -1.75
LRFN3Q9BTN0 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LRFN3Q9BTN0 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.09□□□□□ -1.75
LRFN3Q9BTN0 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
LRFN3Q9BTN0 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.09□□□□□ -1.76
LRFN3Q9BTN0 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
LRFN3Q9BTN0 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.08□□□□□ -1.76
LRFN3Q9BTN0 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LRFN3Q9BTN0 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
LRFN3Q9BTN0 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
LRFN3Q9BTN0 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LRFN3Q9BTN0 SNORA63C-201ENST00000364578 129 ntBASIC4.08□□□□□ -1.76
LRFN3Q9BTN0 SNORA32.2-201ENST00000384049 122 ntBASIC4.08□□□□□ -1.76
LRFN3Q9BTN0 RNU6-510P-201ENST00000391239 108 ntBASIC4.08□□□□□ -1.76
LRFN3Q9BTN0 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.08□□□□□ -1.76
LRFN3Q9BTN0 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.08□□□□□ -1.76
LRFN3Q9BTN0 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.08□□□□□ -1.76
LRFN3Q9BTN0 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.08□□□□□ -1.76
LRFN3Q9BTN0 HMGB1P27-201ENST00000431429 603 ntBASIC4.08□□□□□ -1.76
LRFN3Q9BTN0 AC006011.1-201ENST00000442758 349 ntBASIC4.08□□□□□ -1.76
LRFN3Q9BTN0 GAPDHP27-201ENST00000447427 1020 ntBASIC4.08□□□□□ -1.76
LRFN3Q9BTN0 VN1R17P-201ENST00000472048 1090 ntBASIC4.08□□□□□ -1.76
LRFN3Q9BTN0 SNORD60.2-201ENST00000516883 86 ntBASIC4.08□□□□□ -1.76
LRFN3Q9BTN0 BTF3P12-201ENST00000519620 469 ntBASIC4.08□□□□□ -1.76
LRFN3Q9BTN0 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC4.08□□□□□ -1.76
LRFN3Q9BTN0 PSMA2P1-201ENST00000526365 646 ntBASIC4.08□□□□□ -1.76
LRFN3Q9BTN0 AC087241.2-201ENST00000535801 324 ntBASIC4.08□□□□□ -1.76
LRFN3Q9BTN0 AC093249.1-201ENST00000567049 203 ntBASIC4.08□□□□□ -1.76
LRFN3Q9BTN0 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.08□□□□□ -1.76
LRFN3Q9BTN0 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.08□□□□□ -1.76
LRFN3Q9BTN0 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LRFN3Q9BTN0 AC090617.10-201ENST00000624308 134 ntBASIC4.08□□□□□ -1.76
LRFN3Q9BTN0 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
LRFN3Q9BTN0 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.07□□□□□ -1.76
LRFN3Q9BTN0 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.07□□□□□ -1.76
LRFN3Q9BTN0 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
LRFN3Q9BTN0 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
LRFN3Q9BTN0 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
LRFN3Q9BTN0 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.07□□□□□ -1.76
LRFN3Q9BTN0 AC058791.1-201ENST00000608412 3198 ntBASIC4.07□□□□□ -1.76
LRFN3Q9BTN0 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.07□□□□□ -1.76
LRFN3Q9BTN0 MTND4P35-201ENST00000604257 1375 ntBASIC4.07□□□□□ -1.76
LRFN3Q9BTN0 Y_RNA.184-201ENST00000363884 108 ntBASIC4.07□□□□□ -1.76
LRFN3Q9BTN0 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
LRFN3Q9BTN0 LAP3P1-201ENST00000403648 294 ntBASIC4.07□□□□□ -1.76
LRFN3Q9BTN0 AL121834.1-202ENST00000404494 277 ntBASIC4.07□□□□□ -1.76
LRFN3Q9BTN0 MIR1251-201ENST00000408552 70 ntBASIC4.07□□□□□ -1.76
LRFN3Q9BTN0 AL513331.1-201ENST00000411908 397 ntBASIC4.07□□□□□ -1.76
LRFN3Q9BTN0 MTND3P8-201ENST00000412909 339 ntBASIC4.07□□□□□ -1.76
LRFN3Q9BTN0 NCOR1P3-201ENST00000420479 303 ntBASIC4.07□□□□□ -1.76
LRFN3Q9BTN0 COTL1P1-201ENST00000422309 375 ntBASIC4.07□□□□□ -1.76
LRFN3Q9BTN0 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
LRFN3Q9BTN0 AL591419.1-201ENST00000427423 339 ntBASIC4.07□□□□□ -1.76
LRFN3Q9BTN0 CALM2P2-201ENST00000428512 440 ntBASIC4.07□□□□□ -1.76
LRFN3Q9BTN0 ATP5JP1-201ENST00000431631 322 ntBASIC4.07□□□□□ -1.76
LRFN3Q9BTN0 GPM6BP2-201ENST00000432046 144 ntBASIC4.07□□□□□ -1.76
LRFN3Q9BTN0 MTATP6P16-201ENST00000434543 526 ntBASIC4.07□□□□□ -1.76
LRFN3Q9BTN0 IFNA20P-201ENST00000436840 528 ntBASIC4.07□□□□□ -1.76
LRFN3Q9BTN0 AL138799.3-201ENST00000438968 350 ntBASIC4.07□□□□□ -1.76
LRFN3Q9BTN0 GPM6BP1-201ENST00000446387 144 ntBASIC4.07□□□□□ -1.76
LRFN3Q9BTN0 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.07□□□□□ -1.76
LRFN3Q9BTN0 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.07□□□□□ -1.76
LRFN3Q9BTN0 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC4.07□□□□□ -1.76
LRFN3Q9BTN0 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.07□□□□□ -1.76
LRFN3Q9BTN0 RNU6-953P-201ENST00000459154 107 ntBASIC4.07□□□□□ -1.76
LRFN3Q9BTN0 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.07□□□□□ -1.76
LRFN3Q9BTN0 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 135.3 ms