Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PCGF1Q9BSM1 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PCGF1Q9BSM1 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.9
PCGF1Q9BSM1 AF117829.1-206ENST00000621883 3802 ntBASIC3.15□□□□□ -1.9
PCGF1Q9BSM1 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.15□□□□□ -1.9
PCGF1Q9BSM1 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.15□□□□□ -1.9
PCGF1Q9BSM1 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.15□□□□□ -1.9
PCGF1Q9BSM1 OR4G2P-201ENST00000328113 903 ntBASIC3.15□□□□□ -1.91
PCGF1Q9BSM1 Y_RNA.381-201ENST00000365666 102 ntBASIC3.15□□□□□ -1.91
PCGF1Q9BSM1 MIR181A1-201ENST00000385026 110 ntBASIC3.15□□□□□ -1.91
PCGF1Q9BSM1 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
PCGF1Q9BSM1 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
PCGF1Q9BSM1 RPS4XP3-201ENST00000398541 413 ntBASIC3.15□□□□□ -1.91
PCGF1Q9BSM1 RPS12P24-201ENST00000412619 387 ntBASIC3.15□□□□□ -1.91
PCGF1Q9BSM1 OR51A5P-201ENST00000415429 942 ntBASIC3.15□□□□□ -1.91
PCGF1Q9BSM1 HMGB3P20-201ENST00000417997 600 ntBASIC3.15□□□□□ -1.91
PCGF1Q9BSM1 AL109913.1-201ENST00000421173 514 ntBASIC3.15□□□□□ -1.91
PCGF1Q9BSM1 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.15□□□□□ -1.91
PCGF1Q9BSM1 RPL31P12-201ENST00000422587 358 ntBASIC3.15□□□□□ -1.91
PCGF1Q9BSM1 AC092047.1-201ENST00000424997 240 ntBASIC3.15□□□□□ -1.91
PCGF1Q9BSM1 RPS3AP44-201ENST00000425466 790 ntBASIC3.15□□□□□ -1.91
PCGF1Q9BSM1 ISCA1P1-201ENST00000426679 387 ntBASIC3.15□□□□□ -1.91
PCGF1Q9BSM1 TIMM9P3-201ENST00000428659 274 ntBASIC3.15□□□□□ -1.91
PCGF1Q9BSM1 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.15□□□□□ -1.91
PCGF1Q9BSM1 MTND4P25-201ENST00000441039 533 ntBASIC3.15□□□□□ -1.91
PCGF1Q9BSM1 RPS24P13-201ENST00000442520 397 ntBASIC3.15□□□□□ -1.91
PCGF1Q9BSM1 NOTCH2P1-201ENST00000443481 624 ntBASIC3.15□□□□□ -1.91
PCGF1Q9BSM1 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.15□□□□□ -1.91
PCGF1Q9BSM1 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.15□□□□□ -1.91
PCGF1Q9BSM1 AC093899.1-201ENST00000457984 376 ntBASIC3.15□□□□□ -1.91
PCGF1Q9BSM1 AP002812.1-201ENST00000495378 474 ntBASIC3.15□□□□□ -1.91
PCGF1Q9BSM1 SLC25A15P5-201ENST00000508033 253 ntBASIC3.15□□□□□ -1.91
PCGF1Q9BSM1 APOOP4-201ENST00000513530 597 ntBASIC3.15□□□□□ -1.91
PCGF1Q9BSM1 Y_RNA.689-201ENST00000516589 107 ntBASIC3.15□□□□□ -1.91
PCGF1Q9BSM1 SNORA67.7-201ENST00000516664 135 ntBASIC3.15□□□□□ -1.91
PCGF1Q9BSM1 RNA5SP291-201ENST00000517222 105 ntBASIC3.15□□□□□ -1.91
PCGF1Q9BSM1 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.15□□□□□ -1.91
PCGF1Q9BSM1 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
PCGF1Q9BSM1 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
PCGF1Q9BSM1 OR5BN1P-201ENST00000532955 829 ntBASIC3.15□□□□□ -1.91
PCGF1Q9BSM1 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.15□□□□□ -1.91
PCGF1Q9BSM1 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.15□□□□□ -1.91
PCGF1Q9BSM1 TRAV37-201ENST00000553906 342 ntBASIC3.15□□□□□ -1.91
PCGF1Q9BSM1 ZNF519P2-201ENST00000557032 169 ntBASIC3.15□□□□□ -1.91
PCGF1Q9BSM1 AC034105.3-201ENST00000565294 442 ntBASIC3.15□□□□□ -1.91
PCGF1Q9BSM1 MIR4429-201ENST00000580105 73 ntBASIC3.15□□□□□ -1.91
PCGF1Q9BSM1 MIR4775-201ENST00000581168 75 ntBASIC3.15□□□□□ -1.91
PCGF1Q9BSM1 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.15□□□□□ -1.91
PCGF1Q9BSM1 AP003465.2-201ENST00000602571 373 ntBASIC3.15□□□□□ -1.91
PCGF1Q9BSM1 AC126118.1-201ENST00000607744 628 ntBASIC3.15□□□□□ -1.91
PCGF1Q9BSM1 RMST_8.1-201ENST00000610287 165 ntBASIC3.15□□□□□ -1.91
PCGF1Q9BSM1 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.15□□□□□ -1.91
PCGF1Q9BSM1 U4.5-201ENST00000617137 123 ntBASIC3.15□□□□□ -1.91
PCGF1Q9BSM1 AC002076.2-201ENST00000617362 122 ntBASIC3.15□□□□□ -1.91
PCGF1Q9BSM1 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.15□□□□□ -1.91
PCGF1Q9BSM1 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.15□□□□□ -1.91
PCGF1Q9BSM1 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
PCGF1Q9BSM1 API5P2-201ENST00000397055 1498 ntBASIC3.15□□□□□ -1.91
PCGF1Q9BSM1 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
PCGF1Q9BSM1 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
PCGF1Q9BSM1 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PCGF1Q9BSM1 AL021368.2-201ENST00000606125 5352 ntBASIC3.14□□□□□ -1.91
PCGF1Q9BSM1 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
PCGF1Q9BSM1 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
PCGF1Q9BSM1 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
PCGF1Q9BSM1 RNU6-512P-201ENST00000364438 103 ntBASIC3.14□□□□□ -1.91
PCGF1Q9BSM1 MIR670-201ENST00000390142 98 ntBASIC3.14□□□□□ -1.91
PCGF1Q9BSM1 RNU6-1158P-201ENST00000391167 107 ntBASIC3.14□□□□□ -1.91
PCGF1Q9BSM1 HSPE1P8-201ENST00000406997 288 ntBASIC3.14□□□□□ -1.91
PCGF1Q9BSM1 MIR548F1-201ENST00000408667 84 ntBASIC3.14□□□□□ -1.91
PCGF1Q9BSM1 FCF1P9-201ENST00000412546 282 ntBASIC3.14□□□□□ -1.91
PCGF1Q9BSM1 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.14□□□□□ -1.91
PCGF1Q9BSM1 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
PCGF1Q9BSM1 AL591419.1-201ENST00000427423 339 ntBASIC3.14□□□□□ -1.91
PCGF1Q9BSM1 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.14□□□□□ -1.91
PCGF1Q9BSM1 AL591212.2-201ENST00000433923 257 ntBASIC3.14□□□□□ -1.91
PCGF1Q9BSM1 HSPD1P21-201ENST00000436541 245 ntBASIC3.14□□□□□ -1.91
PCGF1Q9BSM1 Z99127.3-201ENST00000448158 395 ntBASIC3.14□□□□□ -1.91
PCGF1Q9BSM1 AL133547.1-201ENST00000448546 220 ntBASIC3.14□□□□□ -1.91
PCGF1Q9BSM1 FDX1P2-201ENST00000450769 375 ntBASIC3.14□□□□□ -1.91
PCGF1Q9BSM1 FABP5P13-201ENST00000452144 328 ntBASIC3.14□□□□□ -1.91
PCGF1Q9BSM1 AC027673.1-201ENST00000456245 405 ntBASIC3.14□□□□□ -1.91
PCGF1Q9BSM1 AL356010.1-201ENST00000456364 102 ntBASIC3.14□□□□□ -1.91
PCGF1Q9BSM1 RNU7-182P-201ENST00000459009 62 ntBASIC3.14□□□□□ -1.91
PCGF1Q9BSM1 AC006512.1-201ENST00000468816 291 ntBASIC3.14□□□□□ -1.91
PCGF1Q9BSM1 AC126182.1-201ENST00000478134 357 ntBASIC3.14□□□□□ -1.91
PCGF1Q9BSM1 RPL39P36-201ENST00000490784 156 ntBASIC3.14□□□□□ -1.91
PCGF1Q9BSM1 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.14□□□□□ -1.91
PCGF1Q9BSM1 MTND4LP22-201ENST00000508209 276 ntBASIC3.14□□□□□ -1.91
PCGF1Q9BSM1 RNU6-123P-201ENST00000516163 102 ntBASIC3.14□□□□□ -1.91
PCGF1Q9BSM1 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.14□□□□□ -1.91
PCGF1Q9BSM1 TRMT10BP1-201ENST00000519377 943 ntBASIC3.14□□□□□ -1.91
PCGF1Q9BSM1 SUMO2P20-201ENST00000520803 283 ntBASIC3.14□□□□□ -1.91
PCGF1Q9BSM1 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.14□□□□□ -1.91
PCGF1Q9BSM1 AK6P1-201ENST00000540219 478 ntBASIC3.14□□□□□ -1.91
PCGF1Q9BSM1 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC3.14□□□□□ -1.91
PCGF1Q9BSM1 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.14□□□□□ -1.91
PCGF1Q9BSM1 AC090877.1-201ENST00000561418 344 ntBASIC3.14□□□□□ -1.91
PCGF1Q9BSM1 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.14□□□□□ -1.91
PCGF1Q9BSM1 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms