Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.25□□□□□ -2.05
FOXC2Q99958 MTND4P33-201ENST00000556706 766 ntBASIC2.25□□□□□ -2.05
FOXC2Q99958 AC025281.1-201ENST00000567026 265 ntBASIC2.25□□□□□ -2.05
FOXC2Q99958 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC2.25□□□□□ -2.05
FOXC2Q99958 AC005951.2-201ENST00000576282 495 ntBASIC2.25□□□□□ -2.05
FOXC2Q99958 OR1M4P-201ENST00000589199 287 ntBASIC2.25□□□□□ -2.05
FOXC2Q99958 AC083760.1-201ENST00000589621 670 ntBASIC2.25□□□□□ -2.05
FOXC2Q99958 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.25□□□□□ -2.05
FOXC2Q99958 AC007938.3-201ENST00000604965 623 ntBASIC2.25□□□□□ -2.05
FOXC2Q99958 AC107952.2-201ENST00000606048 486 ntBASIC2.25□□□□□ -2.05
FOXC2Q99958 AC080013.3-201ENST00000606839 578 ntBASIC2.25□□□□□ -2.05
FOXC2Q99958 AC024560.3-201ENST00000608482 349 ntBASIC2.25□□□□□ -2.05
FOXC2Q99958 AC092106.3-201ENST00000611308 722 ntBASIC2.25□□□□□ -2.05
FOXC2Q99958 U4.3-201ENST00000621047 82 ntBASIC2.25□□□□□ -2.05
FOXC2Q99958 AC009039.2-201ENST00000624524 529 ntBASIC2.25□□□□□ -2.05
FOXC2Q99958 MIR6733-201ENST00000635723 61 ntBASIC2.25□□□□□ -2.05
FOXC2Q99958 MTND1P37-201ENST00000636562 264 ntBASIC2.25□□□□□ -2.05
FOXC2Q99958 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
FOXC2Q99958 AC135776.4-201ENST00000624300 1904 ntBASIC2.25□□□□□ -2.05
FOXC2Q99958 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
FOXC2Q99958 SNORD113-6-201ENST00000363345 75 ntBASIC2.24□□□□□ -2.05
FOXC2Q99958 RNU4-28P-201ENST00000364739 141 ntBASIC2.24□□□□□ -2.05
FOXC2Q99958 Y_RNA.311-201ENST00000365068 96 ntBASIC2.24□□□□□ -2.05
FOXC2Q99958 RNU6-83P-201ENST00000384568 112 ntBASIC2.24□□□□□ -2.05
FOXC2Q99958 MIR764-201ENST00000390811 85 ntBASIC2.24□□□□□ -2.05
FOXC2Q99958 RN7SKP223-201ENST00000410582 62 ntBASIC2.24□□□□□ -2.05
FOXC2Q99958 RN7SKP140-201ENST00000411196 284 ntBASIC2.24□□□□□ -2.05
FOXC2Q99958 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC2.24□□□□□ -2.05
FOXC2Q99958 DPH3P2-201ENST00000422618 250 ntBASIC2.24□□□□□ -2.05
FOXC2Q99958 MTCO2P17-201ENST00000424336 677 ntBASIC2.24□□□□□ -2.05
FOXC2Q99958 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC2.24□□□□□ -2.05
FOXC2Q99958 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.24□□□□□ -2.05
FOXC2Q99958 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.24□□□□□ -2.05
FOXC2Q99958 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC2.24□□□□□ -2.05
FOXC2Q99958 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.24□□□□□ -2.05
FOXC2Q99958 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.24□□□□□ -2.05
FOXC2Q99958 FAM103A2P-201ENST00000444122 354 ntBASIC2.24□□□□□ -2.05
FOXC2Q99958 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.24□□□□□ -2.05
FOXC2Q99958 MTND1P31-201ENST00000449206 961 ntBASIC2.24□□□□□ -2.05
FOXC2Q99958 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
FOXC2Q99958 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.24□□□□□ -2.05
FOXC2Q99958 MRPS17P3-201ENST00000465453 385 ntBASIC2.24□□□□□ -2.05
FOXC2Q99958 RPL21P99-201ENST00000480369 423 ntBASIC2.24□□□□□ -2.05
FOXC2Q99958 RN7SL499P-201ENST00000481141 276 ntBASIC2.24□□□□□ -2.05
FOXC2Q99958 SUMO2P6-201ENST00000505273 288 ntBASIC2.24□□□□□ -2.05
FOXC2Q99958 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.24□□□□□ -2.05
FOXC2Q99958 AC114786.4-201ENST00000508771 728 ntBASIC2.24□□□□□ -2.05
FOXC2Q99958 AC116353.3-201ENST00000511215 249 ntBASIC2.24□□□□□ -2.05
FOXC2Q99958 MRPS36P2-201ENST00000512569 299 ntBASIC2.24□□□□□ -2.05
FOXC2Q99958 AC114797.1-201ENST00000514003 728 ntBASIC2.24□□□□□ -2.05
FOXC2Q99958 RNU6-311P-201ENST00000516224 102 ntBASIC2.24□□□□□ -2.05
FOXC2Q99958 RNU6-150P-201ENST00000516237 95 ntBASIC2.24□□□□□ -2.05
FOXC2Q99958 MRPS36P3-201ENST00000519284 130 ntBASIC2.24□□□□□ -2.05
FOXC2Q99958 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.24□□□□□ -2.05
FOXC2Q99958 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
FOXC2Q99958 CYCSP2-201ENST00000558168 301 ntBASIC2.24□□□□□ -2.05
FOXC2Q99958 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.24□□□□□ -2.05
FOXC2Q99958 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.24□□□□□ -2.05
FOXC2Q99958 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.24□□□□□ -2.05
FOXC2Q99958 AC090616.3-201ENST00000582184 217 ntBASIC2.24□□□□□ -2.05
FOXC2Q99958 ZNF861P-201ENST00000588126 639 ntBASIC2.24□□□□□ -2.05
FOXC2Q99958 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.24□□□□□ -2.05
FOXC2Q99958 AC023043.3-201ENST00000593113 385 ntBASIC2.24□□□□□ -2.05
FOXC2Q99958 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.24□□□□□ -2.05
FOXC2Q99958 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.24□□□□□ -2.05
FOXC2Q99958 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.24□□□□□ -2.05
FOXC2Q99958 FTX_3.1-201ENST00000610451 147 ntBASIC2.24□□□□□ -2.05
FOXC2Q99958 AC245517.5-201ENST00000611529 162 ntBASIC2.24□□□□□ -2.05
FOXC2Q99958 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.24□□□□□ -2.05
FOXC2Q99958 AC019226.1-201ENST00000625666 515 ntBASIC2.24□□□□□ -2.05
FOXC2Q99958 AC006927.4-201ENST00000639187 543 ntBASIC2.24□□□□□ -2.05
FOXC2Q99958 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
FOXC2Q99958 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
FOXC2Q99958 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
FOXC2Q99958 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
FOXC2Q99958 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
FOXC2Q99958 AC011477.1-204ENST00000623416 1325 ntBASIC2.23□□□□□ -2.05
FOXC2Q99958 CCT4P2-201ENST00000233836 1548 ntBASIC2.23□□□□□ -2.05
FOXC2Q99958 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
FOXC2Q99958 AC092447.10-201ENST00000620607 1652 ntBASIC2.23□□□□□ -2.05
FOXC2Q99958 RNU6-461P-201ENST00000364195 107 ntBASIC2.23□□□□□ -2.05
FOXC2Q99958 AL356057.3-201ENST00000402607 340 ntBASIC2.23□□□□□ -2.05
FOXC2Q99958 MIR1289-2-201ENST00000408360 111 ntBASIC2.23□□□□□ -2.05
FOXC2Q99958 RNU2-33P-201ENST00000410344 192 ntBASIC2.23□□□□□ -2.05
FOXC2Q99958 RNU6-516P-201ENST00000411381 104 ntBASIC2.23□□□□□ -2.05
FOXC2Q99958 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC2.23□□□□□ -2.05
FOXC2Q99958 ZNF863P-201ENST00000426746 417 ntBASIC2.23□□□□□ -2.05
FOXC2Q99958 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.23□□□□□ -2.05
FOXC2Q99958 FCF1P1-201ENST00000432690 571 ntBASIC2.23□□□□□ -2.05
FOXC2Q99958 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.23□□□□□ -2.05
FOXC2Q99958 PTENP1-201ENST00000447117 1215 ntBASIC2.23□□□□□ -2.05
FOXC2Q99958 Z73417.1-201ENST00000447373 778 ntBASIC2.23□□□□□ -2.05
FOXC2Q99958 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC2.23□□□□□ -2.05
FOXC2Q99958 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC2.23□□□□□ -2.05
FOXC2Q99958 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.23□□□□□ -2.05
FOXC2Q99958 RPL21P41-201ENST00000459863 264 ntBASIC2.23□□□□□ -2.05
FOXC2Q99958 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC2.23□□□□□ -2.05
FOXC2Q99958 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC2.23□□□□□ -2.05
FOXC2Q99958 AC098799.2-201ENST00000509466 868 ntBASIC2.23□□□□□ -2.05
FOXC2Q99958 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms