Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
PKP4Q99569 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.38□□□□□ -1.87
PKP4Q99569 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.37□□□□□ -1.87
PKP4Q99569 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
PKP4Q99569 MTND5P33-201ENST00000571250 1450 ntBASIC3.37□□□□□ -1.87
PKP4Q99569 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PKP4Q99569 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
PKP4Q99569 OR5J1P-201ENST00000313544 939 ntBASIC3.37□□□□□ -1.87
PKP4Q99569 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PKP4Q99569 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
PKP4Q99569 DEFB108F-201ENST00000344638 222 ntBASIC3.37□□□□□ -1.87
PKP4Q99569 Y_RNA.234-201ENST00000364409 97 ntBASIC3.37□□□□□ -1.87
PKP4Q99569 RNU6-1207P-201ENST00000384343 107 ntBASIC3.37□□□□□ -1.87
PKP4Q99569 SNORA1.3-201ENST00000384676 136 ntBASIC3.37□□□□□ -1.87
PKP4Q99569 MIR135A2-201ENST00000384854 100 ntBASIC3.37□□□□□ -1.87
PKP4Q99569 MIR218-2-201ENST00000385006 110 ntBASIC3.37□□□□□ -1.87
PKP4Q99569 RNU2-41P-201ENST00000410991 178 ntBASIC3.37□□□□□ -1.87
PKP4Q99569 RPS29P4-201ENST00000414733 161 ntBASIC3.37□□□□□ -1.87
PKP4Q99569 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC3.37□□□□□ -1.87
PKP4Q99569 ZNF90P2-204ENST00000419323 1075 ntBASIC3.37□□□□□ -1.87
PKP4Q99569 AC019097.1-201ENST00000424783 735 ntBASIC3.37□□□□□ -1.87
PKP4Q99569 MTATP6P4-201ENST00000427725 675 ntBASIC3.37□□□□□ -1.87
PKP4Q99569 AC108734.1-201ENST00000439549 399 ntBASIC3.37□□□□□ -1.87
PKP4Q99569 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.37□□□□□ -1.87
PKP4Q99569 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.37□□□□□ -1.87
PKP4Q99569 RPL7P23-201ENST00000493874 747 ntBASIC3.37□□□□□ -1.87
PKP4Q99569 MTCYBP18-201ENST00000501056 747 ntBASIC3.37□□□□□ -1.87
PKP4Q99569 AC008628.2-201ENST00000502605 298 ntBASIC3.37□□□□□ -1.87
PKP4Q99569 AC010587.1-201ENST00000505809 469 ntBASIC3.37□□□□□ -1.87
PKP4Q99569 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.37□□□□□ -1.87
PKP4Q99569 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.37□□□□□ -1.87
PKP4Q99569 SNORA31.1-201ENST00000515993 133 ntBASIC3.37□□□□□ -1.87
PKP4Q99569 SNORA31.5-201ENST00000516190 133 ntBASIC3.37□□□□□ -1.87
PKP4Q99569 RNU6-1281P-201ENST00000516223 105 ntBASIC3.37□□□□□ -1.87
PKP4Q99569 RNU6-711P-201ENST00000517255 106 ntBASIC3.37□□□□□ -1.87
PKP4Q99569 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.37□□□□□ -1.87
PKP4Q99569 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC3.37□□□□□ -1.87
PKP4Q99569 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.37□□□□□ -1.87
PKP4Q99569 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.37□□□□□ -1.87
PKP4Q99569 AC093331.1-201ENST00000521474 169 ntBASIC3.37□□□□□ -1.87
PKP4Q99569 DEFB108D-201ENST00000527787 222 ntBASIC3.37□□□□□ -1.87
PKP4Q99569 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.37□□□□□ -1.87
PKP4Q99569 AP000907.2-201ENST00000530827 353 ntBASIC3.37□□□□□ -1.87
PKP4Q99569 CBX3P7-201ENST00000532876 502 ntBASIC3.37□□□□□ -1.87
PKP4Q99569 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.37□□□□□ -1.87
PKP4Q99569 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.37□□□□□ -1.87
PKP4Q99569 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.37□□□□□ -1.87
PKP4Q99569 SUB1P2-201ENST00000556401 297 ntBASIC3.37□□□□□ -1.87
PKP4Q99569 AL359212.1-201ENST00000556608 614 ntBASIC3.37□□□□□ -1.87
PKP4Q99569 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.37□□□□□ -1.87
PKP4Q99569 AL356432.3-201ENST00000568952 465 ntBASIC3.37□□□□□ -1.87
PKP4Q99569 MIR3921-201ENST00000577308 85 ntBASIC3.37□□□□□ -1.87
PKP4Q99569 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.37□□□□□ -1.87
PKP4Q99569 BNIP3P9-201ENST00000603714 553 ntBASIC3.37□□□□□ -1.87
PKP4Q99569 AL355472.4-201ENST00000610233 626 ntBASIC3.37□□□□□ -1.87
PKP4Q99569 AC104260.1-201ENST00000616660 539 ntBASIC3.37□□□□□ -1.87
PKP4Q99569 AL357559.1-201ENST00000622228 274 ntBASIC3.37□□□□□ -1.87
PKP4Q99569 AC022140.2-201ENST00000623500 188 ntBASIC3.37□□□□□ -1.87
PKP4Q99569 AP003122.6-201ENST00000623831 495 ntBASIC3.37□□□□□ -1.87
PKP4Q99569 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
PKP4Q99569 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.37□□□□□ -1.87
PKP4Q99569 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PKP4Q99569 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PKP4Q99569 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.37□□□□□ -1.87
PKP4Q99569 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.37□□□□□ -1.87
PKP4Q99569 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PKP4Q99569 MTND4P12-201ENST00000498999 1377 ntBASIC3.37□□□□□ -1.87
PKP4Q99569 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PKP4Q99569 MAPK10-322ENST00000641485 4530 ntBASIC3.36□□□□□ -1.87
PKP4Q99569 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
PKP4Q99569 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
PKP4Q99569 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
PKP4Q99569 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.36□□□□□ -1.87
PKP4Q99569 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.36□□□□□ -1.87
PKP4Q99569 RNU6-97P-201ENST00000363387 104 ntBASIC3.36□□□□□ -1.87
PKP4Q99569 Y_RNA.159-201ENST00000363674 87 ntBASIC3.36□□□□□ -1.87
PKP4Q99569 RNU4-1-201ENST00000363925 141 ntBASIC3.36□□□□□ -1.87
PKP4Q99569 RNU6-1322P-201ENST00000364309 107 ntBASIC3.36□□□□□ -1.87
PKP4Q99569 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
PKP4Q99569 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.36□□□□□ -1.87
PKP4Q99569 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.36□□□□□ -1.87
PKP4Q99569 FAT1P1-201ENST00000406588 507 ntBASIC3.36□□□□□ -1.87
PKP4Q99569 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.36□□□□□ -1.87
PKP4Q99569 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.36□□□□□ -1.87
PKP4Q99569 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.36□□□□□ -1.87
PKP4Q99569 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PKP4Q99569 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.36□□□□□ -1.87
PKP4Q99569 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.36□□□□□ -1.87
PKP4Q99569 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.36□□□□□ -1.87
PKP4Q99569 AC119618.1-201ENST00000434191 222 ntBASIC3.36□□□□□ -1.87
PKP4Q99569 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.36□□□□□ -1.87
PKP4Q99569 HMGB3P12-201ENST00000438745 556 ntBASIC3.36□□□□□ -1.87
PKP4Q99569 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.36□□□□□ -1.87
PKP4Q99569 RAC1P7-201ENST00000445367 377 ntBASIC3.36□□□□□ -1.87
PKP4Q99569 UBE2V1P7-201ENST00000446395 340 ntBASIC3.36□□□□□ -1.87
PKP4Q99569 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.36□□□□□ -1.87
PKP4Q99569 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.36□□□□□ -1.87
PKP4Q99569 RBMY2UP-201ENST00000453474 324 ntBASIC3.36□□□□□ -1.87
PKP4Q99569 AC104308.1-201ENST00000454621 333 ntBASIC3.36□□□□□ -1.87
PKP4Q99569 RNA5SP310-201ENST00000459084 116 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms