Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.66□□□□□ -1.82
SNX18Q96RF0 RNU6-277P-201ENST00000516272 106 ntBASIC3.66□□□□□ -1.82
SNX18Q96RF0 RN7SKP256-201ENST00000517201 314 ntBASIC3.66□□□□□ -1.82
SNX18Q96RF0 SNORA31.22-201ENST00000517204 135 ntBASIC3.66□□□□□ -1.82
SNX18Q96RF0 MTND4P7-201ENST00000523876 130 ntBASIC3.66□□□□□ -1.82
SNX18Q96RF0 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.66□□□□□ -1.82
SNX18Q96RF0 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.66□□□□□ -1.82
SNX18Q96RF0 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.66□□□□□ -1.82
SNX18Q96RF0 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.66□□□□□ -1.82
SNX18Q96RF0 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.66□□□□□ -1.82
SNX18Q96RF0 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.66□□□□□ -1.82
SNX18Q96RF0 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.66□□□□□ -1.82
SNX18Q96RF0 AC005498.1-201ENST00000592125 465 ntBASIC3.66□□□□□ -1.82
SNX18Q96RF0 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.66□□□□□ -1.82
SNX18Q96RF0 AL591034.3-201ENST00000605511 685 ntBASIC3.66□□□□□ -1.82
SNX18Q96RF0 AL390240.1-201ENST00000612950 384 ntBASIC3.66□□□□□ -1.82
SNX18Q96RF0 AP001486.3-201ENST00000615334 372 ntBASIC3.66□□□□□ -1.82
SNX18Q96RF0 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.66□□□□□ -1.82
SNX18Q96RF0 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.66□□□□□ -1.82
SNX18Q96RF0 AC090574.1-201ENST00000623186 233 ntBASIC3.66□□□□□ -1.82
SNX18Q96RF0 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.66□□□□□ -1.82
SNX18Q96RF0 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.66□□□□□ -1.82
SNX18Q96RF0 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.66□□□□□ -1.82
SNX18Q96RF0 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.65□□□□□ -1.82
SNX18Q96RF0 LARP1BP1-201ENST00000506036 1359 ntBASIC3.65□□□□□ -1.82
SNX18Q96RF0 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.65□□□□□ -1.83
SNX18Q96RF0 Y_RNA.67-201ENST00000362870 100 ntBASIC3.65□□□□□ -1.83
SNX18Q96RF0 Y_RNA.460-201ENST00000384255 102 ntBASIC3.65□□□□□ -1.83
SNX18Q96RF0 AL356057.2-201ENST00000403318 432 ntBASIC3.65□□□□□ -1.83
SNX18Q96RF0 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.65□□□□□ -1.83
SNX18Q96RF0 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.65□□□□□ -1.83
SNX18Q96RF0 RPL7P46-201ENST00000425129 740 ntBASIC3.65□□□□□ -1.83
SNX18Q96RF0 MTCO1P39-201ENST00000426148 480 ntBASIC3.65□□□□□ -1.83
SNX18Q96RF0 MTATP6P4-201ENST00000427725 675 ntBASIC3.65□□□□□ -1.83
SNX18Q96RF0 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.65□□□□□ -1.83
SNX18Q96RF0 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.65□□□□□ -1.83
SNX18Q96RF0 AC006011.1-201ENST00000442758 349 ntBASIC3.65□□□□□ -1.83
SNX18Q96RF0 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.65□□□□□ -1.83
SNX18Q96RF0 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.65□□□□□ -1.83
SNX18Q96RF0 AC007677.1-201ENST00000445757 515 ntBASIC3.65□□□□□ -1.83
SNX18Q96RF0 AC233279.1-201ENST00000455300 423 ntBASIC3.65□□□□□ -1.83
SNX18Q96RF0 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.65□□□□□ -1.83
SNX18Q96RF0 AC010285.1-201ENST00000470580 392 ntBASIC3.65□□□□□ -1.83
SNX18Q96RF0 RPL23AP11-201ENST00000475260 469 ntBASIC3.65□□□□□ -1.83
SNX18Q96RF0 AL049830.2-201ENST00000480072 201 ntBASIC3.65□□□□□ -1.83
SNX18Q96RF0 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.65□□□□□ -1.83
SNX18Q96RF0 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.65□□□□□ -1.83
SNX18Q96RF0 HMGN1P13-201ENST00000505795 138 ntBASIC3.65□□□□□ -1.83
SNX18Q96RF0 CCDC34P1-201ENST00000507441 517 ntBASIC3.65□□□□□ -1.83
SNX18Q96RF0 GMPSP1-201ENST00000514075 579 ntBASIC3.65□□□□□ -1.83
SNX18Q96RF0 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.65□□□□□ -1.83
SNX18Q96RF0 Y_RNA.701-201ENST00000516812 110 ntBASIC3.65□□□□□ -1.83
SNX18Q96RF0 ERHP1-201ENST00000523006 310 ntBASIC3.65□□□□□ -1.83
SNX18Q96RF0 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.65□□□□□ -1.83
SNX18Q96RF0 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.65□□□□□ -1.83
SNX18Q96RF0 AC025884.1-201ENST00000556034 378 ntBASIC3.65□□□□□ -1.83
SNX18Q96RF0 RPL23AP87-202ENST00000573039 466 ntBASIC3.65□□□□□ -1.83
SNX18Q96RF0 FAM60BP-201ENST00000578364 658 ntBASIC3.65□□□□□ -1.83
SNX18Q96RF0 MIR5684-201ENST00000585074 65 ntBASIC3.65□□□□□ -1.83
SNX18Q96RF0 AL592436.1-201ENST00000605135 558 ntBASIC3.65□□□□□ -1.83
SNX18Q96RF0 AL050343.2-201ENST00000607338 280 ntBASIC3.65□□□□□ -1.83
SNX18Q96RF0 RNVU1-4-201ENST00000612985 164 ntBASIC3.65□□□□□ -1.83
SNX18Q96RF0 SDR42E1P2-201ENST00000614861 481 ntBASIC3.65□□□□□ -1.83
SNX18Q96RF0 MIR7151-201ENST00000617477 60 ntBASIC3.65□□□□□ -1.83
SNX18Q96RF0 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
SNX18Q96RF0 uc_338.11-201ENST00000619132 160 ntBASIC3.65□□□□□ -1.83
SNX18Q96RF0 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.65□□□□□ -1.83
SNX18Q96RF0 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.65□□□□□ -1.83
SNX18Q96RF0 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
SNX18Q96RF0 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SNX18Q96RF0 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SNX18Q96RF0 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.65□□□□□ -1.83
SNX18Q96RF0 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SNX18Q96RF0 AC009812.4-201ENST00000569134 1805 ntBASIC3.65□□□□□ -1.83
SNX18Q96RF0 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SNX18Q96RF0 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SNX18Q96RF0 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SNX18Q96RF0 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.64□□□□□ -1.83
SNX18Q96RF0 MTND4P23-201ENST00000447723 1363 ntBASIC3.64□□□□□ -1.83
SNX18Q96RF0 IPO8P1-201ENST00000455509 3109 ntBASIC3.64□□□□□ -1.83
SNX18Q96RF0 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SNX18Q96RF0 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SNX18Q96RF0 SPRR2C-201ENST00000290702 219 ntBASIC3.64□□□□□ -1.83
SNX18Q96RF0 Y_RNA.100-201ENST00000363141 102 ntBASIC3.64□□□□□ -1.83
SNX18Q96RF0 RNU6-173P-201ENST00000364215 104 ntBASIC3.64□□□□□ -1.83
SNX18Q96RF0 SNORA51.2-201ENST00000364595 132 ntBASIC3.64□□□□□ -1.83
SNX18Q96RF0 Y_RNA.378-201ENST00000365652 113 ntBASIC3.64□□□□□ -1.83
SNX18Q96RF0 AL590704.1-201ENST00000402856 794 ntBASIC3.64□□□□□ -1.83
SNX18Q96RF0 MIR1251-201ENST00000408552 70 ntBASIC3.64□□□□□ -1.83
SNX18Q96RF0 RNA5SP317-201ENST00000410176 116 ntBASIC3.64□□□□□ -1.83
SNX18Q96RF0 RNU6-628P-201ENST00000410675 107 ntBASIC3.64□□□□□ -1.83
SNX18Q96RF0 RN7SKP27-201ENST00000410684 333 ntBASIC3.64□□□□□ -1.83
SNX18Q96RF0 RNA5SP311-201ENST00000411290 116 ntBASIC3.64□□□□□ -1.83
SNX18Q96RF0 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.64□□□□□ -1.83
SNX18Q96RF0 TOMM22P1-201ENST00000418578 312 ntBASIC3.64□□□□□ -1.83
SNX18Q96RF0 AL451054.2-201ENST00000420896 202 ntBASIC3.64□□□□□ -1.83
SNX18Q96RF0 HMGB1P18-201ENST00000438801 619 ntBASIC3.64□□□□□ -1.83
SNX18Q96RF0 HMGB3P11-201ENST00000440127 604 ntBASIC3.64□□□□□ -1.83
SNX18Q96RF0 RPL26P6-201ENST00000440913 438 ntBASIC3.64□□□□□ -1.83
SNX18Q96RF0 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms