Protein–RNA interactions for Protein: Q96MR9

ZNF560, Zinc finger protein 560, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560Q96MR9 LARP1BP3-201ENST00000437229 869 ntBASIC2.87□□□□□ -1.95
ZNF560Q96MR9 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.87□□□□□ -1.95
ZNF560Q96MR9 AL606662.1-201ENST00000445763 553 ntBASIC2.87□□□□□ -1.95
ZNF560Q96MR9 AP000936.2-201ENST00000447151 681 ntBASIC2.87□□□□□ -1.95
ZNF560Q96MR9 AL109933.2-201ENST00000452651 260 ntBASIC2.87□□□□□ -1.95
ZNF560Q96MR9 AC013267.1-201ENST00000458227 267 ntBASIC2.87□□□□□ -1.95
ZNF560Q96MR9 AC087588.1-201ENST00000462203 316 ntBASIC2.87□□□□□ -1.95
ZNF560Q96MR9 RPL23AP41-201ENST00000484754 458 ntBASIC2.87□□□□□ -1.95
ZNF560Q96MR9 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.87□□□□□ -1.95
ZNF560Q96MR9 RNU6-390P-201ENST00000516259 103 ntBASIC2.87□□□□□ -1.95
ZNF560Q96MR9 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.87□□□□□ -1.95
ZNF560Q96MR9 MRPS36P3-201ENST00000519284 130 ntBASIC2.87□□□□□ -1.95
ZNF560Q96MR9 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.87□□□□□ -1.95
ZNF560Q96MR9 MTCO1P47-201ENST00000523889 1271 ntBASIC2.87□□□□□ -1.95
ZNF560Q96MR9 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC2.87□□□□□ -1.95
ZNF560Q96MR9 AC123904.3-201ENST00000547218 814 ntBASIC2.87□□□□□ -1.95
ZNF560Q96MR9 AC093012.1-202ENST00000549403 582 ntBASIC2.87□□□□□ -1.95
ZNF560Q96MR9 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC2.87□□□□□ -1.95
ZNF560Q96MR9 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC2.87□□□□□ -1.95
ZNF560Q96MR9 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.87□□□□□ -1.95
ZNF560Q96MR9 MTCO3P13-201ENST00000577757 781 ntBASIC2.87□□□□□ -1.95
ZNF560Q96MR9 MIR3162-201ENST00000581818 82 ntBASIC2.87□□□□□ -1.95
ZNF560Q96MR9 AC010620.2-201ENST00000600135 313 ntBASIC2.87□□□□□ -1.95
ZNF560Q96MR9 AL359198.2-201ENST00000611836 194 ntBASIC2.87□□□□□ -1.95
ZNF560Q96MR9 SNHG22-203ENST00000617833 660 ntBASIC2.87□□□□□ -1.95
ZNF560Q96MR9 AC002064.3-201ENST00000623448 346 ntBASIC2.87□□□□□ -1.95
ZNF560Q96MR9 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC2.87□□□□□ -1.95
ZNF560Q96MR9 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.87□□□□□ -1.95
ZNF560Q96MR9 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
ZNF560Q96MR9 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
ZNF560Q96MR9 AC138915.1-201ENST00000565427 1685 ntBASIC2.86□□□□□ -1.95
ZNF560Q96MR9 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.86□□□□□ -1.95
ZNF560Q96MR9 FTLP6-201ENST00000355274 422 ntBASIC2.86□□□□□ -1.95
ZNF560Q96MR9 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
ZNF560Q96MR9 SNORD21-201ENST00000383953 95 ntBASIC2.86□□□□□ -1.95
ZNF560Q96MR9 RNU1-109P-201ENST00000383960 147 ntBASIC2.86□□□□□ -1.95
ZNF560Q96MR9 RNU6-253P-201ENST00000384730 105 ntBASIC2.86□□□□□ -1.95
ZNF560Q96MR9 MIR196B-201ENST00000384852 84 ntBASIC2.86□□□□□ -1.95
ZNF560Q96MR9 FO393413.1-201ENST00000402892 195 ntBASIC2.86□□□□□ -1.95
ZNF560Q96MR9 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.86□□□□□ -1.95
ZNF560Q96MR9 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.86□□□□□ -1.95
ZNF560Q96MR9 AL354941.1-201ENST00000438600 464 ntBASIC2.86□□□□□ -1.95
ZNF560Q96MR9 AC005094.1-201ENST00000440420 368 ntBASIC2.86□□□□□ -1.95
ZNF560Q96MR9 MTCYBP3-201ENST00000445588 1137 ntBASIC2.86□□□□□ -1.95
ZNF560Q96MR9 GSTA11P-201ENST00000452866 669 ntBASIC2.86□□□□□ -1.95
ZNF560Q96MR9 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC2.86□□□□□ -1.95
ZNF560Q96MR9 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.86□□□□□ -1.95
ZNF560Q96MR9 MTND5P13-201ENST00000513046 1079 ntBASIC2.86□□□□□ -1.95
ZNF560Q96MR9 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.86□□□□□ -1.95
ZNF560Q96MR9 AC087373.1-201ENST00000524920 491 ntBASIC2.86□□□□□ -1.95
ZNF560Q96MR9 AC007115.1-201ENST00000546853 234 ntBASIC2.86□□□□□ -1.95
ZNF560Q96MR9 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC2.86□□□□□ -1.95
ZNF560Q96MR9 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC2.86□□□□□ -1.95
ZNF560Q96MR9 AL391261.3-201ENST00000557194 520 ntBASIC2.86□□□□□ -1.95
ZNF560Q96MR9 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.86□□□□□ -1.95
ZNF560Q96MR9 MIR4635-201ENST00000583759 79 ntBASIC2.86□□□□□ -1.95
ZNF560Q96MR9 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.86□□□□□ -1.95
ZNF560Q96MR9 RPL12P50-201ENST00000603116 116 ntBASIC2.86□□□□□ -1.95
ZNF560Q96MR9 AC091965.4-201ENST00000607691 587 ntBASIC2.86□□□□□ -1.95
ZNF560Q96MR9 AC103710.1-201ENST00000610003 901 ntBASIC2.86□□□□□ -1.95
ZNF560Q96MR9 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.86□□□□□ -1.95
ZNF560Q96MR9 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.86□□□□□ -1.95
ZNF560Q96MR9 AL031667.3-201ENST00000620124 655 ntBASIC2.86□□□□□ -1.95
ZNF560Q96MR9 AC092608.2-201ENST00000624427 218 ntBASIC2.86□□□□□ -1.95
ZNF560Q96MR9 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.86□□□□□ -1.95
ZNF560Q96MR9 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
ZNF560Q96MR9 MAPK10-266ENST00000641066 6555 ntBASIC2.85□□□□□ -1.95
ZNF560Q96MR9 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
ZNF560Q96MR9 AL356057.3-201ENST00000402607 340 ntBASIC2.85□□□□□ -1.95
ZNF560Q96MR9 RNU6-193P-201ENST00000410977 107 ntBASIC2.85□□□□□ -1.95
ZNF560Q96MR9 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC2.85□□□□□ -1.95
ZNF560Q96MR9 BX682237.1-201ENST00000415016 335 ntBASIC2.85□□□□□ -1.95
ZNF560Q96MR9 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC2.85□□□□□ -1.95
ZNF560Q96MR9 USP9YP13-201ENST00000417797 480 ntBASIC2.85□□□□□ -1.95
ZNF560Q96MR9 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC2.85□□□□□ -1.95
ZNF560Q96MR9 AC009414.1-201ENST00000427200 443 ntBASIC2.85□□□□□ -1.95
ZNF560Q96MR9 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.85□□□□□ -1.95
ZNF560Q96MR9 AC244035.1-201ENST00000430042 390 ntBASIC2.85□□□□□ -1.95
ZNF560Q96MR9 Z80107.1-201ENST00000436830 412 ntBASIC2.85□□□□□ -1.95
ZNF560Q96MR9 WASF1P1-201ENST00000447560 1131 ntBASIC2.85□□□□□ -1.95
ZNF560Q96MR9 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.85□□□□□ -1.95
ZNF560Q96MR9 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.85□□□□□ -1.95
ZNF560Q96MR9 SEM1P1-201ENST00000506694 209 ntBASIC2.85□□□□□ -1.95
ZNF560Q96MR9 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.85□□□□□ -1.95
ZNF560Q96MR9 MTATP6P15-201ENST00000527233 835 ntBASIC2.85□□□□□ -1.95
ZNF560Q96MR9 AP003461.1-201ENST00000528866 78 ntBASIC2.85□□□□□ -1.95
ZNF560Q96MR9 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
ZNF560Q96MR9 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.85□□□□□ -1.95
ZNF560Q96MR9 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.85□□□□□ -1.95
ZNF560Q96MR9 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC2.85□□□□□ -1.95
ZNF560Q96MR9 MIR4307-201ENST00000582802 84 ntBASIC2.85□□□□□ -1.95
ZNF560Q96MR9 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.85□□□□□ -1.95
ZNF560Q96MR9 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.85□□□□□ -1.95
ZNF560Q96MR9 AC019159.1-201ENST00000605094 187 ntBASIC2.85□□□□□ -1.95
ZNF560Q96MR9 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.85□□□□□ -1.95
ZNF560Q96MR9 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC2.85□□□□□ -1.95
ZNF560Q96MR9 MIR6852-201ENST00000621699 66 ntBASIC2.85□□□□□ -1.95
ZNF560Q96MR9 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.85□□□□□ -1.95
ZNF560Q96MR9 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
ZNF560Q96MR9 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms