Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.61□□□□□ -1.99
USP47Q96K76 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
USP47Q96K76 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.61□□□□□ -1.99
USP47Q96K76 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.61□□□□□ -1.99
USP47Q96K76 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
USP47Q96K76 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
USP47Q96K76 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
USP47Q96K76 RNU5A-1-201ENST00000362698 116 ntBASIC2.61□□□□□ -1.99
USP47Q96K76 snoZ40.1-201ENST00000364540 72 ntBASIC2.61□□□□□ -1.99
USP47Q96K76 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
USP47Q96K76 AL356320.2-201ENST00000417263 507 ntBASIC2.61□□□□□ -1.99
USP47Q96K76 MRPS36P1-201ENST00000421291 307 ntBASIC2.61□□□□□ -1.99
USP47Q96K76 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.61□□□□□ -1.99
USP47Q96K76 MTCO2P5-201ENST00000422621 426 ntBASIC2.61□□□□□ -1.99
USP47Q96K76 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.61□□□□□ -1.99
USP47Q96K76 TRGVB-201ENST00000453257 471 ntBASIC2.61□□□□□ -1.99
USP47Q96K76 AC108734.3-201ENST00000481241 1165 ntBASIC2.61□□□□□ -1.99
USP47Q96K76 AC132942.1-201ENST00000486753 483 ntBASIC2.61□□□□□ -1.99
USP47Q96K76 MTCYBP16-201ENST00000509187 1129 ntBASIC2.61□□□□□ -1.99
USP47Q96K76 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.61□□□□□ -1.99
USP47Q96K76 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.61□□□□□ -1.99
USP47Q96K76 AC125611.2-201ENST00000551907 647 ntBASIC2.61□□□□□ -1.99
USP47Q96K76 HIGD1AP17-201ENST00000554576 276 ntBASIC2.61□□□□□ -1.99
USP47Q96K76 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.61□□□□□ -1.99
USP47Q96K76 AC069304.2-201ENST00000605154 435 ntBASIC2.61□□□□□ -1.99
USP47Q96K76 AC069545.1-201ENST00000605671 358 ntBASIC2.61□□□□□ -1.99
USP47Q96K76 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.61□□□□□ -1.99
USP47Q96K76 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.61□□□□□ -1.99
USP47Q96K76 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.6□□□□□ -1.99
USP47Q96K76 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.6□□□□□ -1.99
USP47Q96K76 MTND4P1-201ENST00000457501 1466 ntBASIC2.6□□□□□ -1.99
USP47Q96K76 AL356473.1-201ENST00000406203 1408 ntBASIC2.6□□□□□ -1.99
USP47Q96K76 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.6□□□□□ -1.99
USP47Q96K76 RNU6-28P-201ENST00000362378 107 ntBASIC2.6□□□□□ -1.99
USP47Q96K76 RNA5SP139-201ENST00000364340 117 ntBASIC2.6□□□□□ -1.99
USP47Q96K76 SET-203ENST00000372688 801 ntTSL 2 BASIC2.6□□□□□ -1.99
USP47Q96K76 Y_RNA.408-201ENST00000383987 102 ntBASIC2.6□□□□□ -1.99
USP47Q96K76 MIR1287-201ENST00000408492 90 ntBASIC2.6□□□□□ -1.99
USP47Q96K76 MIR1290-201ENST00000408735 78 ntBASIC2.6□□□□□ -1.99
USP47Q96K76 AL513331.1-201ENST00000411908 397 ntBASIC2.6□□□□□ -1.99
USP47Q96K76 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC2.6□□□□□ -1.99
USP47Q96K76 AL445685.2-201ENST00000422551 342 ntBASIC2.6□□□□□ -1.99
USP47Q96K76 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.6□□□□□ -1.99
USP47Q96K76 AL139421.1-201ENST00000423010 169 ntBASIC2.6□□□□□ -1.99
USP47Q96K76 AP000949.1-201ENST00000438328 629 ntBASIC2.6□□□□□ -1.99
USP47Q96K76 SDCBPP1-201ENST00000440192 890 ntBASIC2.6□□□□□ -1.99
USP47Q96K76 MTND2P20-201ENST00000440805 661 ntBASIC2.6□□□□□ -1.99
USP47Q96K76 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.6□□□□□ -1.99
USP47Q96K76 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC2.6□□□□□ -1.99
USP47Q96K76 RPL30P5-201ENST00000494923 336 ntBASIC2.6□□□□□ -1.99
USP47Q96K76 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
USP47Q96K76 RPL23AP63-201ENST00000498752 471 ntBASIC2.6□□□□□ -1.99
USP47Q96K76 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC2.6□□□□□ -1.99
USP47Q96K76 AC114981.1-201ENST00000503897 678 ntBASIC2.6□□□□□ -1.99
USP47Q96K76 AC093677.1-201ENST00000514414 678 ntBASIC2.6□□□□□ -1.99
USP47Q96K76 RNU6-928P-201ENST00000516876 104 ntBASIC2.6□□□□□ -1.99
USP47Q96K76 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC2.6□□□□□ -1.99
USP47Q96K76 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.6□□□□□ -1.99
USP47Q96K76 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC2.6□□□□□ -1.99
USP47Q96K76 AC008739.2-201ENST00000597006 317 ntBASIC2.6□□□□□ -1.99
USP47Q96K76 U73023.1-201ENST00000603134 700 ntBASIC2.6□□□□□ -1.99
USP47Q96K76 AL390208.1-201ENST00000605885 644 ntBASIC2.6□□□□□ -1.99
USP47Q96K76 AL590099.1-201ENST00000615276 138 ntBASIC2.6□□□□□ -1.99
USP47Q96K76 AL596245.1-201ENST00000618994 362 ntBASIC2.6□□□□□ -1.99
USP47Q96K76 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.6□□□□□ -1.99
USP47Q96K76 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
USP47Q96K76 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.59□□□□□ -1.99
USP47Q96K76 RNU6-198P-201ENST00000384258 104 ntBASIC2.59□□□□□ -2
USP47Q96K76 RNU6-298P-201ENST00000390888 96 ntBASIC2.59□□□□□ -2
USP47Q96K76 RNA5SP492-201ENST00000411330 114 ntBASIC2.59□□□□□ -2
USP47Q96K76 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.59□□□□□ -2
USP47Q96K76 CCDC58P2-201ENST00000417131 366 ntBASIC2.59□□□□□ -2
USP47Q96K76 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.59□□□□□ -2
USP47Q96K76 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.59□□□□□ -2
USP47Q96K76 AC090774.1-201ENST00000435925 246 ntBASIC2.59□□□□□ -2
USP47Q96K76 OFD1P7Y-201ENST00000454643 1155 ntBASIC2.59□□□□□ -2
USP47Q96K76 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.59□□□□□ -2
USP47Q96K76 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.59□□□□□ -2
USP47Q96K76 AC093752.1-206ENST00000511823 336 ntBASIC2.59□□□□□ -2
USP47Q96K76 RNU6-583P-201ENST00000516012 92 ntBASIC2.59□□□□□ -2
USP47Q96K76 SNORA31.22-201ENST00000517204 135 ntBASIC2.59□□□□□ -2
USP47Q96K76 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.59□□□□□ -2
USP47Q96K76 MTND1P36-201ENST00000522384 936 ntBASIC2.59□□□□□ -2
USP47Q96K76 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.59□□□□□ -2
USP47Q96K76 SLC2A13P1-201ENST00000531560 322 ntBASIC2.59□□□□□ -2
USP47Q96K76 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.59□□□□□ -2
USP47Q96K76 AC090615.1-201ENST00000577519 154 ntBASIC2.59□□□□□ -2
USP47Q96K76 AP001429.1-201ENST00000602568 530 ntBASIC2.59□□□□□ -2
USP47Q96K76 AC091057.2-201ENST00000602594 792 ntBASIC2.59□□□□□ -2
USP47Q96K76 AL049779.4-201ENST00000604500 156 ntBASIC2.59□□□□□ -2
USP47Q96K76 RNU6-1192P-201ENST00000612197 107 ntBASIC2.59□□□□□ -2
USP47Q96K76 AC090132.2-201ENST00000615881 347 ntBASIC2.59□□□□□ -2
USP47Q96K76 RNU6-489P-201ENST00000618289 107 ntBASIC2.59□□□□□ -2
USP47Q96K76 AC008443.7-201ENST00000622195 246 ntBASIC2.59□□□□□ -2
USP47Q96K76 AC110079.1-202ENST00000635213 138 ntBASIC2.59□□□□□ -2
USP47Q96K76 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC2.59□□□□□ -2
USP47Q96K76 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
USP47Q96K76 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
USP47Q96K76 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.58□□□□□ -2
USP47Q96K76 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 125.2 ms