Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 CTSL3P-202ENST00000412179 788 ntBASIC5.81□□□□□ -1.48
LRCH3Q96II8 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.81□□□□□ -1.48
LRCH3Q96II8 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC5.81□□□□□ -1.48
LRCH3Q96II8 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC5.81□□□□□ -1.48
LRCH3Q96II8 BTF3P11-201ENST00000426582 477 ntBASIC5.81□□□□□ -1.48
LRCH3Q96II8 RPS15AP5-201ENST00000436276 388 ntBASIC5.81□□□□□ -1.48
LRCH3Q96II8 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC5.81□□□□□ -1.48
LRCH3Q96II8 AC096638.1-201ENST00000444678 216 ntBASIC5.81□□□□□ -1.48
LRCH3Q96II8 AC097484.1-201ENST00000471148 389 ntBASIC5.81□□□□□ -1.48
LRCH3Q96II8 TRBV5-2-201ENST00000489095 273 ntBASIC5.81□□□□□ -1.48
LRCH3Q96II8 AC023424.1-201ENST00000496058 459 ntBASIC5.81□□□□□ -1.48
LRCH3Q96II8 AC104164.2-201ENST00000496953 495 ntBASIC5.81□□□□□ -1.48
LRCH3Q96II8 RNA5SP76-201ENST00000516277 87 ntBASIC5.81□□□□□ -1.48
LRCH3Q96II8 RNU6-589P-201ENST00000516485 107 ntBASIC5.81□□□□□ -1.48
LRCH3Q96II8 AC022616.8-201ENST00000533569 253 ntBASIC5.81□□□□□ -1.48
LRCH3Q96II8 AC091042.1-201ENST00000579213 173 ntBASIC5.81□□□□□ -1.48
LRCH3Q96II8 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC5.81□□□□□ -1.48
LRCH3Q96II8 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.81□□□□□ -1.48
LRCH3Q96II8 Clostridiales-1.2-201ENST00000636724 160 ntBASIC5.81□□□□□ -1.48
LRCH3Q96II8 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.81□□□□□ -1.48
LRCH3Q96II8 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.81□□□□□ -1.48
LRCH3Q96II8 AC005224.3-201ENST00000584683 2140 ntBASIC5.81□□□□□ -1.48
LRCH3Q96II8 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
LRCH3Q96II8 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
LRCH3Q96II8 AC018628.1-201ENST00000624147 3819 ntBASIC5.81□□□□□ -1.48
LRCH3Q96II8 AL451142.2-201ENST00000429076 2090 ntBASIC5.81□□□□□ -1.48
LRCH3Q96II8 SDAD1P1-202ENST00000524156 2051 ntBASIC5.81□□□□□ -1.48
LRCH3Q96II8 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC5.81□□□□□ -1.48
LRCH3Q96II8 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
LRCH3Q96II8 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
LRCH3Q96II8 AL591135.1-201ENST00000401578 5914 ntBASIC5.8□□□□□ -1.48
LRCH3Q96II8 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.8□□□□□ -1.48
LRCH3Q96II8 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
LRCH3Q96II8 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
LRCH3Q96II8 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
LRCH3Q96II8 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
LRCH3Q96II8 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
LRCH3Q96II8 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC5.8□□□□□ -1.48
LRCH3Q96II8 Y_RNA.172-201ENST00000363765 102 ntBASIC5.8□□□□□ -1.48
LRCH3Q96II8 SNORD115-32-201ENST00000364079 82 ntBASIC5.8□□□□□ -1.48
LRCH3Q96II8 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
LRCH3Q96II8 RNU6-213P-201ENST00000384051 104 ntBASIC5.8□□□□□ -1.48
LRCH3Q96II8 AL158156.1-201ENST00000422509 473 ntBASIC5.8□□□□□ -1.48
LRCH3Q96II8 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.8□□□□□ -1.48
LRCH3Q96II8 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC5.8□□□□□ -1.48
LRCH3Q96II8 RNU7-107P-201ENST00000459121 61 ntBASIC5.8□□□□□ -1.48
LRCH3Q96II8 AC107027.2-201ENST00000512197 115 ntBASIC5.8□□□□□ -1.48
LRCH3Q96II8 RN7SKP288-201ENST00000516227 268 ntBASIC5.8□□□□□ -1.48
LRCH3Q96II8 SNORA31.22-201ENST00000517204 135 ntBASIC5.8□□□□□ -1.48
LRCH3Q96II8 RNA5SP373-201ENST00000517271 95 ntBASIC5.8□□□□□ -1.48
LRCH3Q96II8 AC008694.2-201ENST00000517591 306 ntBASIC5.8□□□□□ -1.48
LRCH3Q96II8 AC090281.1-201ENST00000523019 276 ntBASIC5.8□□□□□ -1.48
LRCH3Q96II8 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.8□□□□□ -1.48
LRCH3Q96II8 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC5.8□□□□□ -1.48
LRCH3Q96II8 AC034105.4-201ENST00000568304 277 ntBASIC5.8□□□□□ -1.48
LRCH3Q96II8 AP005403.1-201ENST00000579720 229 ntBASIC5.8□□□□□ -1.48
LRCH3Q96II8 MIR4311-201ENST00000580794 100 ntBASIC5.8□□□□□ -1.48
LRCH3Q96II8 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC5.8□□□□□ -1.48
LRCH3Q96II8 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC5.8□□□□□ -1.48
LRCH3Q96II8 AC039056.2-201ENST00000622261 511 ntBASIC5.8□□□□□ -1.48
LRCH3Q96II8 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.8□□□□□ -1.48
LRCH3Q96II8 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
LRCH3Q96II8 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
LRCH3Q96II8 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
LRCH3Q96II8 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.8□□□□□ -1.48
LRCH3Q96II8 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
LRCH3Q96II8 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
LRCH3Q96II8 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
LRCH3Q96II8 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
LRCH3Q96II8 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
LRCH3Q96II8 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
LRCH3Q96II8 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
LRCH3Q96II8 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
LRCH3Q96II8 RNU6-199P-201ENST00000362954 107 ntBASIC5.79□□□□□ -1.48
LRCH3Q96II8 U3.10-201ENST00000364459 214 ntBASIC5.79□□□□□ -1.48
LRCH3Q96II8 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
LRCH3Q96II8 BTF3L4P2-201ENST00000392798 346 ntBASIC5.79□□□□□ -1.48
LRCH3Q96II8 AC005154.2-201ENST00000438110 379 ntBASIC5.79□□□□□ -1.48
LRCH3Q96II8 KNOP1P3-201ENST00000446933 426 ntBASIC5.79□□□□□ -1.48
LRCH3Q96II8 BX276092.4-201ENST00000452056 248 ntBASIC5.79□□□□□ -1.48
LRCH3Q96II8 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC5.79□□□□□ -1.48
LRCH3Q96II8 GMPSP1-201ENST00000514075 579 ntBASIC5.79□□□□□ -1.48
LRCH3Q96II8 RNU6-927P-201ENST00000516199 100 ntBASIC5.79□□□□□ -1.48
LRCH3Q96II8 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC5.79□□□□□ -1.48
LRCH3Q96II8 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC5.79□□□□□ -1.48
LRCH3Q96II8 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.79□□□□□ -1.48
LRCH3Q96II8 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.79□□□□□ -1.48
LRCH3Q96II8 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC5.79□□□□□ -1.48
LRCH3Q96II8 AC005176.2-201ENST00000596933 147 ntBASIC5.79□□□□□ -1.48
LRCH3Q96II8 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.79□□□□□ -1.48
LRCH3Q96II8 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
LRCH3Q96II8 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
LRCH3Q96II8 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC5.79□□□□□ -1.48
LRCH3Q96II8 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
LRCH3Q96II8 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
LRCH3Q96II8 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.79□□□□□ -1.48
LRCH3Q96II8 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.79□□□□□ -1.48
LRCH3Q96II8 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
LRCH3Q96II8 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
LRCH3Q96II8 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms