Protein–RNA interactions for Protein: Q96AJ9

VTI1A, Vesicle transport through interaction with t-SNAREs homolog 1A, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1AQ96AJ9 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC5.38□□□□□ -1.55
VTI1AQ96AJ9 AC023424.1-201ENST00000496058 459 ntBASIC5.38□□□□□ -1.55
VTI1AQ96AJ9 AC022447.4-201ENST00000504053 364 ntBASIC5.38□□□□□ -1.55
VTI1AQ96AJ9 SUMO2P6-201ENST00000505273 288 ntBASIC5.38□□□□□ -1.55
VTI1AQ96AJ9 RNA5SP392-201ENST00000516905 112 ntBASIC5.38□□□□□ -1.55
VTI1AQ96AJ9 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
VTI1AQ96AJ9 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC5.38□□□□□ -1.55
VTI1AQ96AJ9 MIR4472-2-201ENST00000582069 67 ntBASIC5.38□□□□□ -1.55
VTI1AQ96AJ9 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC5.38□□□□□ -1.55
VTI1AQ96AJ9 AL160281.1-201ENST00000605307 311 ntBASIC5.38□□□□□ -1.55
VTI1AQ96AJ9 AC020634.1-201ENST00000608701 549 ntBASIC5.38□□□□□ -1.55
VTI1AQ96AJ9 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
VTI1AQ96AJ9 AC068724.3-201ENST00000625906 87 ntBASIC5.38□□□□□ -1.55
VTI1AQ96AJ9 MIR4272-201ENST00000635924 64 ntBASIC5.38□□□□□ -1.55
VTI1AQ96AJ9 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
VTI1AQ96AJ9 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
VTI1AQ96AJ9 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
VTI1AQ96AJ9 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
VTI1AQ96AJ9 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.38□□□□□ -1.55
VTI1AQ96AJ9 EOGT-210ENST00000615922 1931 ntBASIC5.38□□□□□ -1.55
VTI1AQ96AJ9 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
VTI1AQ96AJ9 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
VTI1AQ96AJ9 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
VTI1AQ96AJ9 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
VTI1AQ96AJ9 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC5.38□□□□□ -1.55
VTI1AQ96AJ9 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
VTI1AQ96AJ9 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC5.37□□□□□ -1.55
VTI1AQ96AJ9 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
VTI1AQ96AJ9 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
VTI1AQ96AJ9 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VTI1AQ96AJ9 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VTI1AQ96AJ9 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC5.37□□□□□ -1.55
VTI1AQ96AJ9 Y_RNA.48-201ENST00000362710 103 ntBASIC5.37□□□□□ -1.55
VTI1AQ96AJ9 Y_RNA.257-201ENST00000364596 102 ntBASIC5.37□□□□□ -1.55
VTI1AQ96AJ9 MIR129-1-201ENST00000384972 72 ntBASIC5.37□□□□□ -1.55
VTI1AQ96AJ9 AL445529.1-201ENST00000398713 389 ntBASIC5.37□□□□□ -1.55
VTI1AQ96AJ9 MIR1252-201ENST00000408861 65 ntBASIC5.37□□□□□ -1.55
VTI1AQ96AJ9 RNU2-3P-201ENST00000410144 191 ntBASIC5.37□□□□□ -1.55
VTI1AQ96AJ9 AL030996.1-201ENST00000411430 235 ntBASIC5.37□□□□□ -1.55
VTI1AQ96AJ9 AC063979.1-201ENST00000415539 377 ntBASIC5.37□□□□□ -1.55
VTI1AQ96AJ9 UBE2D3P2-201ENST00000424409 445 ntBASIC5.37□□□□□ -1.55
VTI1AQ96AJ9 AC004975.1-201ENST00000428733 208 ntBASIC5.37□□□□□ -1.55
VTI1AQ96AJ9 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC5.37□□□□□ -1.55
VTI1AQ96AJ9 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC5.37□□□□□ -1.55
VTI1AQ96AJ9 AL162591.2-201ENST00000449634 317 ntBASIC5.37□□□□□ -1.55
VTI1AQ96AJ9 AL031274.1-201ENST00000450334 232 ntBASIC5.37□□□□□ -1.55
VTI1AQ96AJ9 SCARNA22-201ENST00000503991 125 ntBASIC5.37□□□□□ -1.55
VTI1AQ96AJ9 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC5.37□□□□□ -1.55
VTI1AQ96AJ9 RNA5SP464-201ENST00000516251 108 ntBASIC5.37□□□□□ -1.55
VTI1AQ96AJ9 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC5.37□□□□□ -1.55
VTI1AQ96AJ9 AP000827.1-201ENST00000527814 258 ntBASIC5.37□□□□□ -1.55
VTI1AQ96AJ9 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC5.37□□□□□ -1.55
VTI1AQ96AJ9 AC023575.1-201ENST00000580510 358 ntBASIC5.37□□□□□ -1.55
VTI1AQ96AJ9 MIR3936-201ENST00000584304 110 ntBASIC5.37□□□□□ -1.55
VTI1AQ96AJ9 MIR548AC-201ENST00000585049 88 ntBASIC5.37□□□□□ -1.55
VTI1AQ96AJ9 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.37□□□□□ -1.55
VTI1AQ96AJ9 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC5.37□□□□□ -1.55
VTI1AQ96AJ9 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC5.37□□□□□ -1.55
VTI1AQ96AJ9 BDH2P1-201ENST00000602288 736 ntBASIC5.37□□□□□ -1.55
VTI1AQ96AJ9 Z98751.3-201ENST00000604447 521 ntBASIC5.37□□□□□ -1.55
VTI1AQ96AJ9 AL121932.1-201ENST00000605542 214 ntBASIC5.37□□□□□ -1.55
VTI1AQ96AJ9 HMGN2P28-201ENST00000606102 262 ntBASIC5.37□□□□□ -1.55
VTI1AQ96AJ9 AL022401.1-201ENST00000619498 108 ntBASIC5.37□□□□□ -1.55
VTI1AQ96AJ9 MIR8062-201ENST00000621515 85 ntBASIC5.37□□□□□ -1.55
VTI1AQ96AJ9 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC5.37□□□□□ -1.55
VTI1AQ96AJ9 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
VTI1AQ96AJ9 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
VTI1AQ96AJ9 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
VTI1AQ96AJ9 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
VTI1AQ96AJ9 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
VTI1AQ96AJ9 AL731532.2-201ENST00000623542 1953 ntBASIC5.36□□□□□ -1.55
VTI1AQ96AJ9 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.36□□□□□ -1.55
VTI1AQ96AJ9 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.36□□□□□ -1.55
VTI1AQ96AJ9 AC107068.1-201ENST00000563286 4218 ntBASIC5.36□□□□□ -1.55
VTI1AQ96AJ9 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
VTI1AQ96AJ9 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
VTI1AQ96AJ9 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.36□□□□□ -1.55
VTI1AQ96AJ9 RNU6-874P-201ENST00000362390 105 ntBASIC5.36□□□□□ -1.55
VTI1AQ96AJ9 RNU6-472P-201ENST00000384299 107 ntBASIC5.36□□□□□ -1.55
VTI1AQ96AJ9 RPL21P1-201ENST00000399532 476 ntBASIC5.36□□□□□ -1.55
VTI1AQ96AJ9 RNU6ATAC23P-201ENST00000408448 123 ntBASIC5.36□□□□□ -1.55
VTI1AQ96AJ9 RPEP3-201ENST00000425462 676 ntBASIC5.36□□□□□ -1.55
VTI1AQ96AJ9 MTATP6P4-201ENST00000427725 675 ntBASIC5.36□□□□□ -1.55
VTI1AQ96AJ9 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.36□□□□□ -1.55
VTI1AQ96AJ9 OSTCP8-201ENST00000445117 448 ntBASIC5.36□□□□□ -1.55
VTI1AQ96AJ9 RPL23AP31-201ENST00000456160 467 ntBASIC5.36□□□□□ -1.55
VTI1AQ96AJ9 AC010618.1-201ENST00000469924 477 ntBASIC5.36□□□□□ -1.55
VTI1AQ96AJ9 RN7SL41P-201ENST00000476144 297 ntBASIC5.36□□□□□ -1.55
VTI1AQ96AJ9 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC5.36□□□□□ -1.55
VTI1AQ96AJ9 AC011005.2-201ENST00000487324 359 ntBASIC5.36□□□□□ -1.55
VTI1AQ96AJ9 RPL17P19-201ENST00000489069 552 ntBASIC5.36□□□□□ -1.55
VTI1AQ96AJ9 AC091868.1-201ENST00000508746 304 ntBASIC5.36□□□□□ -1.55
VTI1AQ96AJ9 GMPSP1-201ENST00000514075 579 ntBASIC5.36□□□□□ -1.55
VTI1AQ96AJ9 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC5.36□□□□□ -1.55
VTI1AQ96AJ9 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC5.36□□□□□ -1.55
VTI1AQ96AJ9 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VTI1AQ96AJ9 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.36□□□□□ -1.55
VTI1AQ96AJ9 OR1M4P-201ENST00000589199 287 ntBASIC5.36□□□□□ -1.55
VTI1AQ96AJ9 AL109918.3-201ENST00000603072 338 ntBASIC5.36□□□□□ -1.55
VTI1AQ96AJ9 HMGB1P24-202ENST00000615653 685 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms