Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 uc_338.25-201ENST00000613756 156 ntBASIC2.83□□□□□ -1.96
PTP4A1Q93096 AC093591.3-201ENST00000634516 308 ntBASIC2.83□□□□□ -1.96
PTP4A1Q93096 U6.105-201ENST00000637379 88 ntBASIC2.83□□□□□ -1.96
PTP4A1Q93096 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
PTP4A1Q93096 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
PTP4A1Q93096 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.83□□□□□ -1.96
PTP4A1Q93096 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
PTP4A1Q93096 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
PTP4A1Q93096 AC135776.4-201ENST00000624300 1904 ntBASIC2.82□□□□□ -1.96
PTP4A1Q93096 RNA5SP72-201ENST00000364442 117 ntBASIC2.82□□□□□ -1.96
PTP4A1Q93096 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.82□□□□□ -1.96
PTP4A1Q93096 RNU6-809P-201ENST00000384461 107 ntBASIC2.82□□□□□ -1.96
PTP4A1Q93096 U3.19-201ENST00000390893 196 ntBASIC2.82□□□□□ -1.96
PTP4A1Q93096 AC245054.2-201ENST00000415639 319 ntBASIC2.82□□□□□ -1.96
PTP4A1Q93096 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC2.82□□□□□ -1.96
PTP4A1Q93096 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.82□□□□□ -1.96
PTP4A1Q93096 AC010099.3-201ENST00000423896 409 ntBASIC2.82□□□□□ -1.96
PTP4A1Q93096 SKA2P1-201ENST00000425592 390 ntBASIC2.82□□□□□ -1.96
PTP4A1Q93096 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.82□□□□□ -1.96
PTP4A1Q93096 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC2.82□□□□□ -1.96
PTP4A1Q93096 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC2.82□□□□□ -1.96
PTP4A1Q93096 PRSS3P4-201ENST00000453323 162 ntBASIC2.82□□□□□ -1.96
PTP4A1Q93096 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.82□□□□□ -1.96
PTP4A1Q93096 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.82□□□□□ -1.96
PTP4A1Q93096 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.82□□□□□ -1.96
PTP4A1Q93096 AC110794.1-201ENST00000505816 425 ntBASIC2.82□□□□□ -1.96
PTP4A1Q93096 RN7SKP43-201ENST00000516173 320 ntBASIC2.82□□□□□ -1.96
PTP4A1Q93096 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.82□□□□□ -1.96
PTP4A1Q93096 AP006587.4-201ENST00000526053 529 ntBASIC2.82□□□□□ -1.96
PTP4A1Q93096 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.82□□□□□ -1.96
PTP4A1Q93096 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.82□□□□□ -1.96
PTP4A1Q93096 MTND1P24-201ENST00000552175 861 ntBASIC2.82□□□□□ -1.96
PTP4A1Q93096 H3F3AP1-201ENST00000559984 334 ntBASIC2.82□□□□□ -1.96
PTP4A1Q93096 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.82□□□□□ -1.96
PTP4A1Q93096 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.82□□□□□ -1.96
PTP4A1Q93096 AC012119.1-201ENST00000603184 222 ntBASIC2.82□□□□□ -1.96
PTP4A1Q93096 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.82□□□□□ -1.96
PTP4A1Q93096 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.82□□□□□ -1.96
PTP4A1Q93096 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC2.82□□□□□ -1.96
PTP4A1Q93096 AC068057.2-201ENST00000624047 895 ntBASIC2.82□□□□□ -1.96
PTP4A1Q93096 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC2.82□□□□□ -1.96
PTP4A1Q93096 AC092104.1-201ENST00000497346 1441 ntBASIC2.82□□□□□ -1.96
PTP4A1Q93096 AC004520.1-201ENST00000608362 1413 ntBASIC2.82□□□□□ -1.96
PTP4A1Q93096 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
PTP4A1Q93096 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
PTP4A1Q93096 SNORA71.3-201ENST00000362582 128 ntBASIC2.81□□□□□ -1.96
PTP4A1Q93096 Y_RNA.97-201ENST00000363094 102 ntBASIC2.81□□□□□ -1.96
PTP4A1Q93096 RNU6-658P-201ENST00000384606 106 ntBASIC2.81□□□□□ -1.96
PTP4A1Q93096 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.81□□□□□ -1.96
PTP4A1Q93096 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.81□□□□□ -1.96
PTP4A1Q93096 AC063979.1-201ENST00000415539 377 ntBASIC2.81□□□□□ -1.96
PTP4A1Q93096 SEPT2P1-201ENST00000419651 180 ntBASIC2.81□□□□□ -1.96
PTP4A1Q93096 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.81□□□□□ -1.96
PTP4A1Q93096 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.81□□□□□ -1.96
PTP4A1Q93096 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.81□□□□□ -1.96
PTP4A1Q93096 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.81□□□□□ -1.96
PTP4A1Q93096 RPL39P36-201ENST00000490784 156 ntBASIC2.81□□□□□ -1.96
PTP4A1Q93096 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC2.81□□□□□ -1.96
PTP4A1Q93096 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
PTP4A1Q93096 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC2.81□□□□□ -1.96
PTP4A1Q93096 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.81□□□□□ -1.96
PTP4A1Q93096 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.81□□□□□ -1.96
PTP4A1Q93096 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.81□□□□□ -1.96
PTP4A1Q93096 CKS1BP3-201ENST00000600888 237 ntBASIC2.81□□□□□ -1.96
PTP4A1Q93096 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.81□□□□□ -1.96
PTP4A1Q93096 AL359198.2-201ENST00000611836 194 ntBASIC2.81□□□□□ -1.96
PTP4A1Q93096 AC107871.2-201ENST00000612894 502 ntBASIC2.81□□□□□ -1.96
PTP4A1Q93096 AC100793.4-201ENST00000613683 429 ntBASIC2.81□□□□□ -1.96
PTP4A1Q93096 AC084757.4-201ENST00000616350 526 ntBASIC2.81□□□□□ -1.96
PTP4A1Q93096 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.81□□□□□ -1.96
PTP4A1Q93096 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
PTP4A1Q93096 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.81□□□□□ -1.96
PTP4A1Q93096 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.81□□□□□ -1.96
PTP4A1Q93096 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
PTP4A1Q93096 MTND5P30-201ENST00000452896 1731 ntBASIC2.8□□□□□ -1.96
PTP4A1Q93096 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.8□□□□□ -1.96
PTP4A1Q93096 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
PTP4A1Q93096 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
PTP4A1Q93096 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
PTP4A1Q93096 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
PTP4A1Q93096 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
PTP4A1Q93096 MIR301A-201ENST00000385261 86 ntBASIC2.8□□□□□ -1.96
PTP4A1Q93096 AL356057.2-201ENST00000403318 432 ntBASIC2.8□□□□□ -1.96
PTP4A1Q93096 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
PTP4A1Q93096 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
PTP4A1Q93096 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.8□□□□□ -1.96
PTP4A1Q93096 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.8□□□□□ -1.96
PTP4A1Q93096 GSTA11P-201ENST00000452866 669 ntBASIC2.8□□□□□ -1.96
PTP4A1Q93096 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC2.8□□□□□ -1.96
PTP4A1Q93096 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.8□□□□□ -1.96
PTP4A1Q93096 AL441985.1-201ENST00000457727 251 ntBASIC2.8□□□□□ -1.96
PTP4A1Q93096 snoU13.22-201ENST00000459428 104 ntBASIC2.8□□□□□ -1.96
PTP4A1Q93096 AC008155.2-201ENST00000464337 397 ntBASIC2.8□□□□□ -1.96
PTP4A1Q93096 TRBV1-201ENST00000476502 284 ntBASIC2.8□□□□□ -1.96
PTP4A1Q93096 AC098799.2-201ENST00000509466 868 ntBASIC2.8□□□□□ -1.96
PTP4A1Q93096 SCARNA17.1-201ENST00000516211 143 ntBASIC2.8□□□□□ -1.96
PTP4A1Q93096 SCARNA17.2-201ENST00000516334 143 ntBASIC2.8□□□□□ -1.96
PTP4A1Q93096 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.8□□□□□ -1.96
PTP4A1Q93096 AC022616.6-201ENST00000520479 119 ntBASIC2.8□□□□□ -1.96
PTP4A1Q93096 AC123904.2-201ENST00000548059 300 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms