Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.71□□□□□ -1.65
BRF1Q92994 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC4.71□□□□□ -1.65
BRF1Q92994 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.71□□□□□ -1.65
BRF1Q92994 Y_RNA.28-201ENST00000362554 111 ntBASIC4.71□□□□□ -1.66
BRF1Q92994 Y_RNA.31-201ENST00000362574 102 ntBASIC4.71□□□□□ -1.66
BRF1Q92994 RNU6-593P-201ENST00000364716 112 ntBASIC4.71□□□□□ -1.66
BRF1Q92994 SNORA23-201ENST00000365128 182 ntBASIC4.71□□□□□ -1.66
BRF1Q92994 SNORA16.2-201ENST00000390991 127 ntBASIC4.71□□□□□ -1.66
BRF1Q92994 SNORD70.1-201ENST00000391007 85 ntBASIC4.71□□□□□ -1.66
BRF1Q92994 MIR450B-201ENST00000401182 78 ntBASIC4.71□□□□□ -1.66
BRF1Q92994 LAP3P1-201ENST00000403648 294 ntBASIC4.71□□□□□ -1.66
BRF1Q92994 RNU6ATAC16P-201ENST00000408591 138 ntBASIC4.71□□□□□ -1.66
BRF1Q92994 RNU6-712P-201ENST00000410558 100 ntBASIC4.71□□□□□ -1.66
BRF1Q92994 RNU6-1304P-201ENST00000411374 106 ntBASIC4.71□□□□□ -1.66
BRF1Q92994 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC4.71□□□□□ -1.66
BRF1Q92994 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.71□□□□□ -1.66
BRF1Q92994 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.71□□□□□ -1.66
BRF1Q92994 AC004866.2-201ENST00000438285 481 ntBASIC4.71□□□□□ -1.66
BRF1Q92994 AC104058.1-201ENST00000448028 297 ntBASIC4.71□□□□□ -1.66
BRF1Q92994 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC4.71□□□□□ -1.66
BRF1Q92994 RNU7-167P-201ENST00000459160 62 ntBASIC4.71□□□□□ -1.66
BRF1Q92994 RPL7P42-201ENST00000481005 679 ntBASIC4.71□□□□□ -1.66
BRF1Q92994 AC008526.1-201ENST00000509149 338 ntBASIC4.71□□□□□ -1.66
BRF1Q92994 SMURF2P1-201ENST00000514992 481 ntBASIC4.71□□□□□ -1.66
BRF1Q92994 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC4.71□□□□□ -1.66
BRF1Q92994 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
BRF1Q92994 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC4.71□□□□□ -1.66
BRF1Q92994 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.71□□□□□ -1.66
BRF1Q92994 XIAPP1-201ENST00000603162 600 ntBASIC4.71□□□□□ -1.66
BRF1Q92994 AL670379.4-201ENST00000605279 254 ntBASIC4.71□□□□□ -1.66
BRF1Q92994 AC010680.4-201ENST00000605334 543 ntBASIC4.71□□□□□ -1.66
BRF1Q92994 FAM157A-202ENST00000615155 405 ntBASIC4.71□□□□□ -1.66
BRF1Q92994 AL450472.3-201ENST00000615578 367 ntBASIC4.71□□□□□ -1.66
BRF1Q92994 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
BRF1Q92994 MTND5P16-201ENST00000460269 1703 ntBASIC4.71□□□□□ -1.66
BRF1Q92994 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
BRF1Q92994 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.71□□□□□ -1.66
BRF1Q92994 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
BRF1Q92994 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
BRF1Q92994 AL049555.1-201ENST00000562834 1933 ntBASIC4.7□□□□□ -1.66
BRF1Q92994 Y_RNA.144-201ENST00000363521 113 ntBASIC4.7□□□□□ -1.66
BRF1Q92994 RNA5SP399-201ENST00000364003 117 ntBASIC4.7□□□□□ -1.66
BRF1Q92994 RNU6-393P-201ENST00000384475 107 ntBASIC4.7□□□□□ -1.66
BRF1Q92994 AL445189.1-201ENST00000405722 338 ntBASIC4.7□□□□□ -1.66
BRF1Q92994 MIR1251-201ENST00000408552 70 ntBASIC4.7□□□□□ -1.66
BRF1Q92994 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC4.7□□□□□ -1.66
BRF1Q92994 RPLP0P7-201ENST00000416050 667 ntBASIC4.7□□□□□ -1.66
BRF1Q92994 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC4.7□□□□□ -1.66
BRF1Q92994 PPP1R11P2-201ENST00000423543 382 ntBASIC4.7□□□□□ -1.66
BRF1Q92994 AL591704.1-201ENST00000432574 275 ntBASIC4.7□□□□□ -1.66
BRF1Q92994 CKS1BP5-201ENST00000434172 273 ntBASIC4.7□□□□□ -1.66
BRF1Q92994 RPS23P7-201ENST00000466210 444 ntBASIC4.7□□□□□ -1.66
BRF1Q92994 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.7□□□□□ -1.66
BRF1Q92994 OARD1-209ENST00000471367 401 ntTSL 2 BASIC4.7□□□□□ -1.66
BRF1Q92994 RN7SL860P-201ENST00000473738 223 ntBASIC4.7□□□□□ -1.66
BRF1Q92994 RN7SL271P-201ENST00000487601 295 ntBASIC4.7□□□□□ -1.66
BRF1Q92994 AP001086.1-201ENST00000494882 321 ntBASIC4.7□□□□□ -1.66
BRF1Q92994 AP002812.1-201ENST00000495378 474 ntBASIC4.7□□□□□ -1.66
BRF1Q92994 SNORA14.1-201ENST00000516113 141 ntBASIC4.7□□□□□ -1.66
BRF1Q92994 RNU6-1069P-201ENST00000516612 133 ntBASIC4.7□□□□□ -1.66
BRF1Q92994 RNU6-352P-201ENST00000516908 107 ntBASIC4.7□□□□□ -1.66
BRF1Q92994 RANP9-201ENST00000519957 271 ntBASIC4.7□□□□□ -1.66
BRF1Q92994 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.7□□□□□ -1.66
BRF1Q92994 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.7□□□□□ -1.66
BRF1Q92994 AL591034.3-201ENST00000605511 685 ntBASIC4.7□□□□□ -1.66
BRF1Q92994 MIR6867-201ENST00000610636 67 ntBASIC4.7□□□□□ -1.66
BRF1Q92994 AL157817.1-201ENST00000614264 790 ntBASIC4.7□□□□□ -1.66
BRF1Q92994 AC083809.1-201ENST00000615051 472 ntBASIC4.7□□□□□ -1.66
BRF1Q92994 AL359547.2-201ENST00000615810 418 ntBASIC4.7□□□□□ -1.66
BRF1Q92994 AC018555.1-201ENST00000567548 1980 ntBASIC4.7□□□□□ -1.66
BRF1Q92994 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
BRF1Q92994 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
BRF1Q92994 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.7□□□□□ -1.66
BRF1Q92994 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
BRF1Q92994 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
BRF1Q92994 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
BRF1Q92994 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
BRF1Q92994 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
BRF1Q92994 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.7□□□□□ -1.66
BRF1Q92994 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
BRF1Q92994 AC090337.1-201ENST00000579651 2074 ntBASIC4.69□□□□□ -1.66
BRF1Q92994 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.69□□□□□ -1.66
BRF1Q92994 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
BRF1Q92994 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.69□□□□□ -1.66
BRF1Q92994 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
BRF1Q92994 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
BRF1Q92994 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
BRF1Q92994 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
BRF1Q92994 RNU6-434P-201ENST00000384376 107 ntBASIC4.69□□□□□ -1.66
BRF1Q92994 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC4.69□□□□□ -1.66
BRF1Q92994 RNU2-43P-201ENST00000410306 190 ntBASIC4.69□□□□□ -1.66
BRF1Q92994 Y_RNA.625-201ENST00000411256 107 ntBASIC4.69□□□□□ -1.66
BRF1Q92994 AL356095.1-201ENST00000417217 199 ntBASIC4.69□□□□□ -1.66
BRF1Q92994 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.69□□□□□ -1.66
BRF1Q92994 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
BRF1Q92994 C4BPAP2-201ENST00000428434 478 ntBASIC4.69□□□□□ -1.66
BRF1Q92994 RPL23AP69-201ENST00000431134 458 ntBASIC4.69□□□□□ -1.66
BRF1Q92994 MRPS31P2-201ENST00000451581 518 ntBASIC4.69□□□□□ -1.66
BRF1Q92994 FABP5P13-201ENST00000452144 328 ntBASIC4.69□□□□□ -1.66
BRF1Q92994 AL132838.2-201ENST00000492041 314 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms