Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PCDH20Q8N6Y1 RNU6-1103P-201ENST00000384150 107 ntBASIC3.31□□□□□ -1.88
PCDH20Q8N6Y1 RNU6-517P-201ENST00000384362 110 ntBASIC3.31□□□□□ -1.88
PCDH20Q8N6Y1 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PCDH20Q8N6Y1 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PCDH20Q8N6Y1 AC110754.1-201ENST00000399740 601 ntBASIC3.31□□□□□ -1.88
PCDH20Q8N6Y1 RNU4-47P-201ENST00000410876 114 ntBASIC3.31□□□□□ -1.88
PCDH20Q8N6Y1 AC063979.1-201ENST00000415539 377 ntBASIC3.31□□□□□ -1.88
PCDH20Q8N6Y1 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.31□□□□□ -1.88
PCDH20Q8N6Y1 C8orf59P1-201ENST00000429930 303 ntBASIC3.31□□□□□ -1.88
PCDH20Q8N6Y1 MTCO2P11-201ENST00000431069 680 ntBASIC3.31□□□□□ -1.88
PCDH20Q8N6Y1 MTND3P21-201ENST00000433774 331 ntBASIC3.31□□□□□ -1.88
PCDH20Q8N6Y1 AC125238.1-201ENST00000448842 249 ntBASIC3.31□□□□□ -1.88
PCDH20Q8N6Y1 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC3.31□□□□□ -1.88
PCDH20Q8N6Y1 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.31□□□□□ -1.88
PCDH20Q8N6Y1 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.31□□□□□ -1.88
PCDH20Q8N6Y1 AC109925.1-201ENST00000478069 331 ntBASIC3.31□□□□□ -1.88
PCDH20Q8N6Y1 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.31□□□□□ -1.88
PCDH20Q8N6Y1 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.31□□□□□ -1.88
PCDH20Q8N6Y1 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.31□□□□□ -1.88
PCDH20Q8N6Y1 RNU6-445P-201ENST00000516949 107 ntBASIC3.31□□□□□ -1.88
PCDH20Q8N6Y1 SNORA70.24-201ENST00000517233 118 ntBASIC3.31□□□□□ -1.88
PCDH20Q8N6Y1 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.31□□□□□ -1.88
PCDH20Q8N6Y1 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.31□□□□□ -1.88
PCDH20Q8N6Y1 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.31□□□□□ -1.88
PCDH20Q8N6Y1 AP003072.2-201ENST00000527756 676 ntBASIC3.31□□□□□ -1.88
PCDH20Q8N6Y1 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PCDH20Q8N6Y1 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.31□□□□□ -1.88
PCDH20Q8N6Y1 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC3.31□□□□□ -1.88
PCDH20Q8N6Y1 AC128657.1-201ENST00000549459 145 ntBASIC3.31□□□□□ -1.88
PCDH20Q8N6Y1 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.31□□□□□ -1.88
PCDH20Q8N6Y1 MED28P6-201ENST00000558776 231 ntBASIC3.31□□□□□ -1.88
PCDH20Q8N6Y1 RPL21P12-201ENST00000559810 515 ntBASIC3.31□□□□□ -1.88
PCDH20Q8N6Y1 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.31□□□□□ -1.88
PCDH20Q8N6Y1 AP003465.2-201ENST00000602571 373 ntBASIC3.31□□□□□ -1.88
PCDH20Q8N6Y1 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.31□□□□□ -1.88
PCDH20Q8N6Y1 AL161756.2-201ENST00000604597 246 ntBASIC3.31□□□□□ -1.88
PCDH20Q8N6Y1 AL136363.1-201ENST00000605349 337 ntBASIC3.31□□□□□ -1.88
PCDH20Q8N6Y1 SNHG22-203ENST00000617833 660 ntBASIC3.31□□□□□ -1.88
PCDH20Q8N6Y1 AL158209.2-201ENST00000619266 216 ntBASIC3.31□□□□□ -1.88
PCDH20Q8N6Y1 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.31□□□□□ -1.88
PCDH20Q8N6Y1 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PCDH20Q8N6Y1 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PCDH20Q8N6Y1 CR848007.1-201ENST00000442354 1699 ntBASIC3.3□□□□□ -1.88
PCDH20Q8N6Y1 AC116096.1-201ENST00000566804 2314 ntBASIC3.3□□□□□ -1.88
PCDH20Q8N6Y1 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PCDH20Q8N6Y1 HSPE1P11-201ENST00000339579 310 ntBASIC3.3□□□□□ -1.88
PCDH20Q8N6Y1 SNORD56.2-201ENST00000363242 71 ntBASIC3.3□□□□□ -1.88
PCDH20Q8N6Y1 SNORD56.3-201ENST00000363507 71 ntBASIC3.3□□□□□ -1.88
PCDH20Q8N6Y1 RNU6-1284P-201ENST00000363701 100 ntBASIC3.3□□□□□ -1.88
PCDH20Q8N6Y1 TXNP7-201ENST00000406296 293 ntBASIC3.3□□□□□ -1.88
PCDH20Q8N6Y1 RNU4-55P-201ENST00000410731 137 ntBASIC3.3□□□□□ -1.88
PCDH20Q8N6Y1 RNA5SP229-201ENST00000410809 99 ntBASIC3.3□□□□□ -1.88
PCDH20Q8N6Y1 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PCDH20Q8N6Y1 AC245291.1-201ENST00000419501 328 ntBASIC3.3□□□□□ -1.88
PCDH20Q8N6Y1 AC073464.1-201ENST00000429823 534 ntBASIC3.3□□□□□ -1.88
PCDH20Q8N6Y1 FCF1P1-201ENST00000432690 571 ntBASIC3.3□□□□□ -1.88
PCDH20Q8N6Y1 VDAC1P3-201ENST00000434069 851 ntBASIC3.3□□□□□ -1.88
PCDH20Q8N6Y1 MTND1P4-201ENST00000435196 415 ntBASIC3.3□□□□□ -1.88
PCDH20Q8N6Y1 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC3.3□□□□□ -1.88
PCDH20Q8N6Y1 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC3.3□□□□□ -1.88
PCDH20Q8N6Y1 AC132479.1-201ENST00000449160 144 ntBASIC3.3□□□□□ -1.88
PCDH20Q8N6Y1 AC140076.1-201ENST00000449897 361 ntBASIC3.3□□□□□ -1.88
PCDH20Q8N6Y1 AC093392.2-201ENST00000450682 337 ntBASIC3.3□□□□□ -1.88
PCDH20Q8N6Y1 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.3□□□□□ -1.88
PCDH20Q8N6Y1 VN1R17P-201ENST00000472048 1090 ntBASIC3.3□□□□□ -1.88
PCDH20Q8N6Y1 RPS27AP1-201ENST00000475545 471 ntBASIC3.3□□□□□ -1.88
PCDH20Q8N6Y1 AC092185.1-201ENST00000491371 97 ntBASIC3.3□□□□□ -1.88
PCDH20Q8N6Y1 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.3□□□□□ -1.88
PCDH20Q8N6Y1 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.3□□□□□ -1.88
PCDH20Q8N6Y1 RNU2-10P-201ENST00000516375 211 ntBASIC3.3□□□□□ -1.88
PCDH20Q8N6Y1 RNU6-840P-201ENST00000517275 65 ntBASIC3.3□□□□□ -1.88
PCDH20Q8N6Y1 AC090572.1-201ENST00000519251 160 ntBASIC3.3□□□□□ -1.88
PCDH20Q8N6Y1 FAM60DP-201ENST00000524174 632 ntBASIC3.3□□□□□ -1.88
PCDH20Q8N6Y1 OR4H12P-201ENST00000556269 907 ntBASIC3.3□□□□□ -1.88
PCDH20Q8N6Y1 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.3□□□□□ -1.88
PCDH20Q8N6Y1 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC3.3□□□□□ -1.88
PCDH20Q8N6Y1 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.3□□□□□ -1.88
PCDH20Q8N6Y1 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.3□□□□□ -1.88
PCDH20Q8N6Y1 MIR5004-201ENST00000579078 107 ntBASIC3.3□□□□□ -1.88
PCDH20Q8N6Y1 AC105224.1-201ENST00000587055 421 ntBASIC3.3□□□□□ -1.88
PCDH20Q8N6Y1 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.3□□□□□ -1.88
PCDH20Q8N6Y1 AC025165.5-201ENST00000602802 578 ntBASIC3.3□□□□□ -1.88
PCDH20Q8N6Y1 AC004696.1-201ENST00000614345 607 ntBASIC3.3□□□□□ -1.88
PCDH20Q8N6Y1 AC068137.3-201ENST00000639191 341 ntBASIC3.3□□□□□ -1.88
PCDH20Q8N6Y1 AC073869.6-201ENST00000640656 341 ntBASIC3.3□□□□□ -1.88
PCDH20Q8N6Y1 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.3□□□□□ -1.88
PCDH20Q8N6Y1 OR5H6-203ENST00000642105 978 ntBASIC3.3□□□□□ -1.88
PCDH20Q8N6Y1 SRP72P2-201ENST00000344851 1979 ntBASIC3.3□□□□□ -1.88
PCDH20Q8N6Y1 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
PCDH20Q8N6Y1 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PCDH20Q8N6Y1 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PCDH20Q8N6Y1 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PCDH20Q8N6Y1 RNU6-805P-201ENST00000365643 106 ntBASIC3.29□□□□□ -1.88
PCDH20Q8N6Y1 RNU1-39P-201ENST00000383897 165 ntBASIC3.29□□□□□ -1.88
PCDH20Q8N6Y1 SNORA9-201ENST00000384215 133 ntBASIC3.29□□□□□ -1.88
PCDH20Q8N6Y1 SNORA36C-201ENST00000384289 132 ntBASIC3.29□□□□□ -1.88
PCDH20Q8N6Y1 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
PCDH20Q8N6Y1 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.29□□□□□ -1.88
PCDH20Q8N6Y1 AL359634.1-202ENST00000404721 284 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 157.8 ms