Protein–RNA interactions for Protein: Q7Z494

NPHP3, Nephrocystin-3, humanhuman

Predictions only

Length 1,330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3Q7Z494 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
NPHP3Q7Z494 RNU6-462P-201ENST00000362659 105 ntBASIC3.29□□□□□ -1.88
NPHP3Q7Z494 RNU6-660P-201ENST00000364566 109 ntBASIC3.29□□□□□ -1.88
NPHP3Q7Z494 RNA5SP88-201ENST00000365560 109 ntBASIC3.29□□□□□ -1.88
NPHP3Q7Z494 FAT1P1-201ENST00000406588 507 ntBASIC3.29□□□□□ -1.88
NPHP3Q7Z494 RNU4-72P-201ENST00000410754 173 ntBASIC3.29□□□□□ -1.88
NPHP3Q7Z494 AC083875.1-201ENST00000419509 405 ntBASIC3.29□□□□□ -1.88
NPHP3Q7Z494 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.29□□□□□ -1.88
NPHP3Q7Z494 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.29□□□□□ -1.88
NPHP3Q7Z494 SDCBPP1-201ENST00000440192 890 ntBASIC3.29□□□□□ -1.88
NPHP3Q7Z494 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC3.29□□□□□ -1.88
NPHP3Q7Z494 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC3.29□□□□□ -1.88
NPHP3Q7Z494 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.29□□□□□ -1.88
NPHP3Q7Z494 AC107222.1-201ENST00000510899 637 ntBASIC3.29□□□□□ -1.88
NPHP3Q7Z494 MRPS36P5-201ENST00000551909 298 ntBASIC3.29□□□□□ -1.88
NPHP3Q7Z494 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.29□□□□□ -1.88
NPHP3Q7Z494 RNU6-88P-201ENST00000606801 100 ntBASIC3.29□□□□□ -1.88
NPHP3Q7Z494 AP002826.1-201ENST00000608835 315 ntBASIC3.29□□□□□ -1.88
NPHP3Q7Z494 AC009570.1-201ENST00000609599 745 ntBASIC3.29□□□□□ -1.88
NPHP3Q7Z494 AL357080.1-201ENST00000617394 239 ntBASIC3.29□□□□□ -1.88
NPHP3Q7Z494 AC092192.1-201ENST00000633154 1018 ntBASIC3.29□□□□□ -1.88
NPHP3Q7Z494 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
NPHP3Q7Z494 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
NPHP3Q7Z494 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
NPHP3Q7Z494 ZNF736P9Y-201ENST00000439586 1345 ntBASIC3.29□□□□□ -1.88
NPHP3Q7Z494 AC002543.1-201ENST00000299783 1954 ntBASIC3.29□□□□□ -1.88
NPHP3Q7Z494 MTND5P7-201ENST00000413558 1798 ntBASIC3.28□□□□□ -1.88
NPHP3Q7Z494 Y_RNA.302-201ENST00000364997 102 ntBASIC3.28□□□□□ -1.88
NPHP3Q7Z494 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.28□□□□□ -1.88
NPHP3Q7Z494 AL049545.1-201ENST00000401856 572 ntBASIC3.28□□□□□ -1.88
NPHP3Q7Z494 AL354719.1-201ENST00000406535 843 ntBASIC3.28□□□□□ -1.88
NPHP3Q7Z494 RNU2-43P-201ENST00000410306 190 ntBASIC3.28□□□□□ -1.88
NPHP3Q7Z494 RNU6-1077P-201ENST00000410506 102 ntBASIC3.28□□□□□ -1.88
NPHP3Q7Z494 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.28□□□□□ -1.88
NPHP3Q7Z494 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.28□□□□□ -1.88
NPHP3Q7Z494 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC3.28□□□□□ -1.88
NPHP3Q7Z494 AC024082.2-201ENST00000434771 238 ntBASIC3.28□□□□□ -1.88
NPHP3Q7Z494 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC3.28□□□□□ -1.88
NPHP3Q7Z494 MTCO1P27-201ENST00000448269 226 ntBASIC3.28□□□□□ -1.88
NPHP3Q7Z494 TRBV1-201ENST00000476502 284 ntBASIC3.28□□□□□ -1.88
NPHP3Q7Z494 AC072039.1-201ENST00000477611 581 ntBASIC3.28□□□□□ -1.88
NPHP3Q7Z494 AC126182.1-201ENST00000478134 357 ntBASIC3.28□□□□□ -1.88
NPHP3Q7Z494 RN7SL297P-201ENST00000483161 293 ntBASIC3.28□□□□□ -1.88
NPHP3Q7Z494 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC3.28□□□□□ -1.88
NPHP3Q7Z494 HSPE1P18-201ENST00000517602 280 ntBASIC3.28□□□□□ -1.88
NPHP3Q7Z494 AC007536.1-201ENST00000533382 349 ntBASIC3.28□□□□□ -1.88
NPHP3Q7Z494 SNRPGP18-201ENST00000553000 214 ntBASIC3.28□□□□□ -1.88
NPHP3Q7Z494 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.28□□□□□ -1.88
NPHP3Q7Z494 AC012435.1-202ENST00000568772 240 ntBASIC3.28□□□□□ -1.88
NPHP3Q7Z494 AC002400.1-201ENST00000569310 726 ntBASIC3.28□□□□□ -1.88
NPHP3Q7Z494 MTCO3P24-201ENST00000572729 782 ntBASIC3.28□□□□□ -1.88
NPHP3Q7Z494 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.28□□□□□ -1.88
NPHP3Q7Z494 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.28□□□□□ -1.88
NPHP3Q7Z494 AC013444.2-201ENST00000603317 787 ntBASIC3.28□□□□□ -1.88
NPHP3Q7Z494 CLPTM1LP1-201ENST00000604519 484 ntBASIC3.28□□□□□ -1.88
NPHP3Q7Z494 AC072039.2-201ENST00000608883 439 ntBASIC3.28□□□□□ -1.88
NPHP3Q7Z494 MIR6873-201ENST00000622788 63 ntBASIC3.28□□□□□ -1.88
NPHP3Q7Z494 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
NPHP3Q7Z494 AC011477.1-204ENST00000623416 1325 ntBASIC3.28□□□□□ -1.88
NPHP3Q7Z494 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
NPHP3Q7Z494 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
NPHP3Q7Z494 MTND4P16-201ENST00000466108 1367 ntBASIC3.27□□□□□ -1.89
NPHP3Q7Z494 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.27□□□□□ -1.89
NPHP3Q7Z494 Y_RNA.18-201ENST00000362461 102 ntBASIC3.27□□□□□ -1.89
NPHP3Q7Z494 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC3.27□□□□□ -1.89
NPHP3Q7Z494 MIR320C1-201ENST00000408566 88 ntBASIC3.27□□□□□ -1.89
NPHP3Q7Z494 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC3.27□□□□□ -1.89
NPHP3Q7Z494 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.27□□□□□ -1.89
NPHP3Q7Z494 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.27□□□□□ -1.89
NPHP3Q7Z494 SNRPEP7-201ENST00000438350 220 ntBASIC3.27□□□□□ -1.89
NPHP3Q7Z494 THAP5P1-201ENST00000439089 262 ntBASIC3.27□□□□□ -1.89
NPHP3Q7Z494 AL445567.1-201ENST00000439121 144 ntBASIC3.27□□□□□ -1.89
NPHP3Q7Z494 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.27□□□□□ -1.89
NPHP3Q7Z494 RPL9P33-201ENST00000484311 566 ntBASIC3.27□□□□□ -1.89
NPHP3Q7Z494 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.27□□□□□ -1.89
NPHP3Q7Z494 AC026436.1-201ENST00000510537 270 ntBASIC3.27□□□□□ -1.89
NPHP3Q7Z494 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
NPHP3Q7Z494 SNORA70.16-201ENST00000516390 95 ntBASIC3.27□□□□□ -1.89
NPHP3Q7Z494 RNU6-232P-201ENST00000517144 64 ntBASIC3.27□□□□□ -1.89
NPHP3Q7Z494 MTND2P38-201ENST00000522536 667 ntBASIC3.27□□□□□ -1.89
NPHP3Q7Z494 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.27□□□□□ -1.89
NPHP3Q7Z494 AC136618.2-201ENST00000575091 400 ntBASIC3.27□□□□□ -1.89
NPHP3Q7Z494 MTCO3P13-201ENST00000577757 781 ntBASIC3.27□□□□□ -1.89
NPHP3Q7Z494 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.27□□□□□ -1.89
NPHP3Q7Z494 AC090616.2-202ENST00000584248 222 ntBASIC3.27□□□□□ -1.89
NPHP3Q7Z494 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.27□□□□□ -1.89
NPHP3Q7Z494 AC023043.3-201ENST00000593113 385 ntBASIC3.27□□□□□ -1.89
NPHP3Q7Z494 AC103710.4-201ENST00000609301 899 ntBASIC3.27□□□□□ -1.89
NPHP3Q7Z494 AC079248.2-201ENST00000623779 326 ntBASIC3.27□□□□□ -1.89
NPHP3Q7Z494 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
NPHP3Q7Z494 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
NPHP3Q7Z494 CUL1P1-201ENST00000509510 2425 ntBASIC3.27□□□□□ -1.89
NPHP3Q7Z494 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
NPHP3Q7Z494 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.27□□□□□ -1.89
NPHP3Q7Z494 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
NPHP3Q7Z494 FRG1BP-201ENST00000278882 761 ntBASIC3.26□□□□□ -1.89
NPHP3Q7Z494 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.26□□□□□ -1.89
NPHP3Q7Z494 RPS4XP3-201ENST00000398541 413 ntBASIC3.26□□□□□ -1.89
NPHP3Q7Z494 RN7SKP140-201ENST00000411196 284 ntBASIC3.26□□□□□ -1.89
NPHP3Q7Z494 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms