Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 AL139156.1-201ENST00000412785 841 ntBASIC4.9□□□□□ -1.63
RNF43Q68DV7 UBE2V1P4-201ENST00000425374 344 ntBASIC4.9□□□□□ -1.63
RNF43Q68DV7 EZH2P1-201ENST00000431167 291 ntBASIC4.9□□□□□ -1.63
RNF43Q68DV7 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.9□□□□□ -1.63
RNF43Q68DV7 AC069499.1-201ENST00000489433 509 ntBASIC4.9□□□□□ -1.63
RNF43Q68DV7 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
RNF43Q68DV7 AC091868.1-201ENST00000508746 304 ntBASIC4.9□□□□□ -1.63
RNF43Q68DV7 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC4.9□□□□□ -1.63
RNF43Q68DV7 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.9□□□□□ -1.63
RNF43Q68DV7 CBX3P8-201ENST00000532412 525 ntBASIC4.9□□□□□ -1.63
RNF43Q68DV7 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.9□□□□□ -1.63
RNF43Q68DV7 AP002770.2-201ENST00000543613 532 ntBASIC4.9□□□□□ -1.63
RNF43Q68DV7 AC133555.2-201ENST00000550213 292 ntBASIC4.9□□□□□ -1.63
RNF43Q68DV7 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.9□□□□□ -1.63
RNF43Q68DV7 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC4.9□□□□□ -1.63
RNF43Q68DV7 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.9□□□□□ -1.63
RNF43Q68DV7 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC4.9□□□□□ -1.63
RNF43Q68DV7 RPS29P30-201ENST00000600975 111 ntBASIC4.9□□□□□ -1.63
RNF43Q68DV7 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.9□□□□□ -1.63
RNF43Q68DV7 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.9□□□□□ -1.63
RNF43Q68DV7 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.9□□□□□ -1.63
RNF43Q68DV7 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
RNF43Q68DV7 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
RNF43Q68DV7 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
RNF43Q68DV7 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
RNF43Q68DV7 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.9□□□□□ -1.63
RNF43Q68DV7 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
RNF43Q68DV7 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
RNF43Q68DV7 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
RNF43Q68DV7 EOGT-210ENST00000615922 1931 ntBASIC4.89□□□□□ -1.63
RNF43Q68DV7 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RNF43Q68DV7 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.89□□□□□ -1.63
RNF43Q68DV7 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RNF43Q68DV7 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.89□□□□□ -1.63
RNF43Q68DV7 RNY1P16-201ENST00000363063 111 ntBASIC4.89□□□□□ -1.63
RNF43Q68DV7 Y_RNA.183-201ENST00000363882 113 ntBASIC4.89□□□□□ -1.63
RNF43Q68DV7 Y_RNA.269-201ENST00000364685 89 ntBASIC4.89□□□□□ -1.63
RNF43Q68DV7 Y_RNA.277-201ENST00000364754 102 ntBASIC4.89□□□□□ -1.63
RNF43Q68DV7 SNORD50B-201ENST00000364995 70 ntBASIC4.89□□□□□ -1.63
RNF43Q68DV7 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
RNF43Q68DV7 HDGFP1-201ENST00000405943 252 ntBASIC4.89□□□□□ -1.63
RNF43Q68DV7 RNU6-174P-201ENST00000410406 106 ntBASIC4.89□□□□□ -1.63
RNF43Q68DV7 RPL23AP1-201ENST00000428990 471 ntBASIC4.89□□□□□ -1.63
RNF43Q68DV7 PPIAP3-201ENST00000450588 505 ntBASIC4.89□□□□□ -1.63
RNF43Q68DV7 Y_RNA.644-201ENST00000459006 113 ntBASIC4.89□□□□□ -1.63
RNF43Q68DV7 RPS27AP1-201ENST00000475545 471 ntBASIC4.89□□□□□ -1.63
RNF43Q68DV7 RPL21P103-201ENST00000479921 488 ntBASIC4.89□□□□□ -1.63
RNF43Q68DV7 AC018437.1-201ENST00000492214 406 ntBASIC4.89□□□□□ -1.63
RNF43Q68DV7 RN7SL604P-201ENST00000492589 296 ntBASIC4.89□□□□□ -1.63
RNF43Q68DV7 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.89□□□□□ -1.63
RNF43Q68DV7 Y_RNA.674-201ENST00000516362 113 ntBASIC4.89□□□□□ -1.63
RNF43Q68DV7 AC109329.1-201ENST00000518744 317 ntBASIC4.89□□□□□ -1.63
RNF43Q68DV7 AC018442.3-201ENST00000523025 183 ntBASIC4.89□□□□□ -1.63
RNF43Q68DV7 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.89□□□□□ -1.63
RNF43Q68DV7 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.89□□□□□ -1.63
RNF43Q68DV7 AC093249.4-201ENST00000564755 259 ntBASIC4.89□□□□□ -1.63
RNF43Q68DV7 AC023575.1-201ENST00000580510 358 ntBASIC4.89□□□□□ -1.63
RNF43Q68DV7 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.89□□□□□ -1.63
RNF43Q68DV7 AL355877.2-201ENST00000603670 358 ntBASIC4.89□□□□□ -1.63
RNF43Q68DV7 MIR92B-201ENST00000607575 96 ntBASIC4.89□□□□□ -1.63
RNF43Q68DV7 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.89□□□□□ -1.63
RNF43Q68DV7 MIR6716-201ENST00000613413 80 ntBASIC4.89□□□□□ -1.63
RNF43Q68DV7 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC4.89□□□□□ -1.63
RNF43Q68DV7 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.89□□□□□ -1.63
RNF43Q68DV7 AL450472.1-202ENST00000637286 180 ntBASIC4.89□□□□□ -1.63
RNF43Q68DV7 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
RNF43Q68DV7 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
RNF43Q68DV7 OR51H2P-202ENST00000641424 3046 ntBASIC4.89□□□□□ -1.63
RNF43Q68DV7 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RNF43Q68DV7 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RNF43Q68DV7 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RNF43Q68DV7 AP000542.2-201ENST00000623199 6179 ntBASIC4.89□□□□□ -1.63
RNF43Q68DV7 AC000123.3-201ENST00000624029 4975 ntBASIC4.89□□□□□ -1.63
RNF43Q68DV7 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RNF43Q68DV7 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.89□□□□□ -1.63
RNF43Q68DV7 MAPK10-286ENST00000641208 8747 ntBASIC4.89□□□□□ -1.63
RNF43Q68DV7 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RNF43Q68DV7 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
RNF43Q68DV7 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RNF43Q68DV7 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.88□□□□□ -1.63
RNF43Q68DV7 HSPA8P4-201ENST00000511877 1920 ntBASIC4.88□□□□□ -1.63
RNF43Q68DV7 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RNF43Q68DV7 AL590240.1-201ENST00000334118 313 ntBASIC4.88□□□□□ -1.63
RNF43Q68DV7 MIR335-201ENST00000362173 94 ntBASIC4.88□□□□□ -1.63
RNF43Q68DV7 RNU6-1284P-201ENST00000363701 100 ntBASIC4.88□□□□□ -1.63
RNF43Q68DV7 RNA5SP447-201ENST00000363749 119 ntBASIC4.88□□□□□ -1.63
RNF43Q68DV7 RNA5SP28-201ENST00000363841 119 ntBASIC4.88□□□□□ -1.63
RNF43Q68DV7 Y_RNA.352-201ENST00000365439 102 ntBASIC4.88□□□□□ -1.63
RNF43Q68DV7 MIR215-201ENST00000384858 110 ntBASIC4.88□□□□□ -1.63
RNF43Q68DV7 AL590762.2-201ENST00000395798 571 ntBASIC4.88□□□□□ -1.63
RNF43Q68DV7 RNU6-130P-201ENST00000411112 103 ntBASIC4.88□□□□□ -1.63
RNF43Q68DV7 ELOCP19-201ENST00000411919 318 ntBASIC4.88□□□□□ -1.63
RNF43Q68DV7 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.88□□□□□ -1.63
RNF43Q68DV7 RPL23AP25-201ENST00000430973 463 ntBASIC4.88□□□□□ -1.63
RNF43Q68DV7 AC127537.2-201ENST00000439258 465 ntBASIC4.88□□□□□ -1.63
RNF43Q68DV7 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RNF43Q68DV7 CEACAMP6-201ENST00000452007 574 ntBASIC4.88□□□□□ -1.63
RNF43Q68DV7 AP000926.1-201ENST00000479573 241 ntBASIC4.88□□□□□ -1.63
RNF43Q68DV7 RPL21P129-201ENST00000491732 478 ntBASIC4.88□□□□□ -1.63
RNF43Q68DV7 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms